data_5HWY # _model_server_result.job_id 1RAvhhXqsWqgLFMOZfoaFg _model_server_result.datetime_utc '2025-08-17 04:17:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hwy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5HWY # _exptl.entry_id 5HWY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HWY _cell.length_a 46.213 _cell.length_b 71.966 _cell.length_c 95.633 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HWY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 47 A ALA 47 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc2 A OG1 THR 50 A THR 50 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc3 A O THR 50 A THR 50 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc4 A OG SER 51 A SER 51 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc5 A OE1 GLU 54 A GLU 54 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc6 A OE2 GLU 54 A GLU 54 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc7 A O THR 209 A THR 209 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc8 A OE2 GLU 213 A GLU 213 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc9 A OE1 GLU 213 A GLU 213 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc10 A OE2 GLU 213 A GLU 213 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc11 A OG SER 236 A SER 236 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 326 n n C10 C9 OLC doub 327 n n C10 C11 OLC sing 328 n n C9 C8 OLC sing 329 n n C17 C16 OLC sing 330 z n C11 C12 OLC sing 331 n n C8 C7 OLC sing 332 n n C24 C22 OLC sing 333 n n C24 O25 OLC sing 334 n n C16 C15 OLC sing 335 n n C12 C13 OLC sing 336 n n C7 C6 OLC sing 337 n n C15 C14 OLC sing 338 n n C13 C14 OLC sing 339 n n C6 C5 OLC sing 340 n n C5 C4 OLC sing 341 n n C4 C3 OLC sing 342 n n C3 C2 OLC sing 343 n n C2 C1 OLC sing 344 n n C21 C22 OLC sing 345 n n C21 O20 OLC sing 346 n n C1 O19 OLC doub 347 n n C1 O20 OLC sing 348 n n C22 O23 OLC sing 349 n n C18 H18 OLC sing 350 n n C18 H18A OLC sing 351 n n C18 H18B OLC sing 352 n n C10 H10 OLC sing 353 n n C9 H9 OLC sing 354 n n C17 H17 OLC sing 355 n n C17 H17A OLC sing 356 n n C11 H11 OLC sing 357 n n C11 H11A OLC sing 358 n n C8 H8 OLC sing 359 n n C8 H8A OLC sing 360 n n C24 H24 OLC sing 361 n n C24 H24A OLC sing 362 n n C16 H16 OLC sing 363 n n C16 H16A OLC sing 364 n n C12 H12 OLC sing 365 n n C12 H12A OLC sing 366 n n C7 H7 OLC sing 367 n n C7 H7A OLC sing 368 n n C15 H15 OLC sing 369 n n C15 H15A OLC sing 370 n n C13 H13 OLC sing 371 n n C13 H13A OLC sing 372 n n C6 H6 OLC sing 373 n n C6 H6A OLC sing 374 n n C14 H14 OLC sing 375 n n C14 H14A OLC sing 376 n n C5 H5 OLC sing 377 n n C5 H5A OLC sing 378 n n C4 H4 OLC sing 379 n n C4 H4A OLC sing 380 n n C3 H3 OLC sing 381 n n C3 H3A OLC sing 382 n n C2 H2 OLC sing 383 n n C2 H2A OLC sing 384 n n C21 H21 OLC sing 385 n n C21 H21A OLC sing 386 n n C22 H22 OLC sing 387 n n O25 HO25 OLC sing 388 n n O23 HO23 OLC sing 389 n n # _atom_sites.entry_id 5HWY _atom_sites.fract_transf_matrix[1][1] 0.021639 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013895 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010457 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLC A 1 401 1 OLC MON . C 3 NA A 1 402 3 NA NA . D 3 NA A 1 403 4 NA NA . E 4 MYS A 1 404 1 MYS FAT . F 4 MYS A 1 405 3 MYS FAT . G 4 MYS A 1 406 5 MYS FAT . H 4 MYS A 1 407 6 MYS FAT . I 4 MYS A 1 408 7 MYS FAT . J 4 MYS A 1 409 8 MYS FAT . K 4 MYS A 1 410 9 MYS FAT . L 4 MYS A 1 411 13 MYS FAT . M 4 MYS A 1 412 15 MYS FAT . N 4 MYS A 1 413 18 MYS FAT . O 4 MYS A 1 414 19 MYS FAT . P 4 MYS A 1 415 20 MYS FAT . Q 4 MYS A 1 416 22 MYS FAT . R 4 MYS A 1 417 23 MYS FAT . S 4 MYS A 1 418 24 MYS FAT . T 5 ACT A 1 419 1 ACT ACT . U 6 1PE A 1 420 1 1PE PEG . V 7 HOH A 1 501 31 HOH HOH . V 7 HOH A 2 502 27 HOH HOH . V 7 HOH A 3 503 19 HOH HOH . V 7 HOH A 4 504 17 HOH HOH . V 7 HOH A 5 505 15 HOH HOH . V 7 HOH A 6 506 3 HOH HOH . V 7 HOH A 7 507 4 HOH HOH . V 7 HOH A 8 508 10 HOH HOH . V 7 HOH A 9 509 33 HOH HOH . V 7 HOH A 10 510 11 HOH HOH . V 7 HOH A 11 511 2 HOH HOH . V 7 HOH A 12 512 20 HOH HOH . V 7 HOH A 13 513 23 HOH HOH . V 7 HOH A 14 514 5 HOH HOH . V 7 HOH A 15 515 9 HOH HOH . V 7 HOH A 16 516 35 HOH HOH . V 7 HOH A 17 517 1 HOH HOH . V 7 HOH A 18 518 8 HOH HOH . V 7 HOH A 19 519 16 HOH HOH . V 7 HOH A 20 520 18 HOH HOH . V 7 HOH A 21 521 24 HOH HOH . V 7 HOH A 22 522 6 HOH HOH . V 7 HOH A 23 523 29 HOH HOH . V 7 HOH A 24 524 7 HOH HOH . V 7 HOH A 25 525 25 HOH HOH . V 7 HOH A 26 526 28 HOH HOH . V 7 HOH A 27 527 26 HOH HOH . V 7 HOH A 28 528 22 HOH HOH . V 7 HOH A 29 529 36 HOH HOH . V 7 HOH A 30 530 32 HOH HOH . V 7 HOH A 31 531 14 HOH HOH . V 7 HOH A 32 532 34 HOH HOH . V 7 HOH A 33 533 13 HOH HOH . V 7 HOH A 34 534 12 HOH HOH . V 7 HOH A 35 535 21 HOH HOH . V 7 HOH A 36 536 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 OLC . . . B 2 9.124 40.953 27.441 1 50.96 ? C10 OLC 401 A 1 HETATM 2 C C9 OLC . . . B 2 9.602 39.51 27.376 1 52.52 ? C9 OLC 401 A 1 HETATM 3 C C11 OLC . . . B 2 7.723 41.189 28.04 1 46.97 ? C11 OLC 401 A 1 HETATM 4 C C8 OLC . . . B 2 8.645 38.438 27.925 1 63.67 ? C8 OLC 401 A 1 HETATM 5 C C24 OLC . . . B 2 1.738 28.692 26.579 1 63.14 ? C24 OLC 401 A 1 HETATM 6 C C12 OLC . . . B 2 7.786 42.124 29.234 1 40.62 ? C12 OLC 401 A 1 HETATM 7 C C7 OLC . . . B 2 9.417 37.138 28.111 1 53.88 ? C7 OLC 401 A 1 HETATM 8 C C15 OLC . . . B 2 4.296 41.298 30.683 1 38.92 ? C15 OLC 401 A 1 HETATM 9 C C13 OLC . . . B 2 6.366 42.365 29.767 1 44.89 ? C13 OLC 401 A 1 HETATM 10 C C6 OLC . . . B 2 8.511 36.03 28.665 1 54.69 ? C6 OLC 401 A 1 HETATM 11 C C14 OLC . . . B 2 5.716 41.04 30.174 1 48.84 ? C14 OLC 401 A 1 HETATM 12 C C5 OLC . . . B 2 7.317 35.759 27.75 1 58.88 ? C5 OLC 401 A 1 HETATM 13 C C4 OLC . . . B 2 6.511 34.61 28.361 1 49.52 ? C4 OLC 401 A 1 HETATM 14 C C3 OLC . . . B 2 5.25 34.398 27.539 1 47.42 ? C3 OLC 401 A 1 HETATM 15 C C2 OLC . . . B 2 4.421 33.274 28.147 1 57.95 ? C2 OLC 401 A 1 HETATM 16 C C21 OLC . . . B 2 2.666 31.007 27.141 1 65.02 ? C21 OLC 401 A 1 HETATM 17 C C1 OLC . . . B 2 3.143 33.227 27.306 1 60.45 ? C1 OLC 401 A 1 HETATM 18 C C22 OLC . . . B 2 1.414 30.111 27.047 1 71.32 ? C22 OLC 401 A 1 HETATM 19 O O19 OLC . . . B 2 3.061 33.869 26.27 1 63.82 ? O19 OLC 401 A 1 HETATM 20 O O25 OLC . . . B 2 0.471 28.025 26.526 1 65.01 ? O25 OLC 401 A 1 HETATM 21 O O23 OLC . . . B 2 0.724 30.063 28.316 1 75.82 ? O23 OLC 401 A 1 HETATM 22 O O20 OLC . . . B 2 2.221 32.289 27.587 1 64.26 ? O20 OLC 401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 22 #