data_5HXH # _model_server_result.job_id 4TWPhw26d09O2PGGTCK1Zg _model_server_result.datetime_utc '2024-11-15 03:52:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hxh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 5HXH # _exptl.entry_id 5HXH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 212.415 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PENTADECANE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.2 _cell.angle_gamma 90 _cell.entry_id 5HXH _cell.length_a 164.177 _cell.length_b 46.827 _cell.length_c 96.963 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HXH _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,O 1 1 B,H,I,J,K,L,M,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ILE 118 A ILE 118 1_555 C CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.96 ? metalc ? metalc2 A OD1 ASP 121 A ASP 121 1_555 C CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc3 A OD2 ASP 127 A ASP 127 1_555 C CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc4 B O ILE 118 B ILE 118 1_555 H CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc5 B OD1 ASP 121 B ASP 121 1_555 H CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc6 B OD2 ASP 121 B ASP 121 1_555 H CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc7 B OD2 ASP 127 B ASP 127 1_555 H CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? # _chem_comp.formula 'C15 H32' _chem_comp.formula_weight 212.415 _chem_comp.id MYS _chem_comp.mon_nstd_flag . _chem_comp.name PENTADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MYS sing 274 n n C1 H11 MYS sing 275 n n C1 H12 MYS sing 276 n n C1 H13 MYS sing 277 n n C2 C3 MYS sing 278 n n C2 H21 MYS sing 279 n n C2 H22 MYS sing 280 n n C3 C4 MYS sing 281 n n C3 H31 MYS sing 282 n n C3 H32 MYS sing 283 n n C4 C5 MYS sing 284 n n C4 H41 MYS sing 285 n n C4 H42 MYS sing 286 n n C5 C6 MYS sing 287 n n C5 H51 MYS sing 288 n n C5 H52 MYS sing 289 n n C6 C7 MYS sing 290 n n C6 H61 MYS sing 291 n n C6 H62 MYS sing 292 n n C7 C8 MYS sing 293 n n C7 H71 MYS sing 294 n n C7 H72 MYS sing 295 n n C8 C9 MYS sing 296 n n C8 H81 MYS sing 297 n n C8 H82 MYS sing 298 n n C9 C10 MYS sing 299 n n C9 H91 MYS sing 300 n n C9 H92 MYS sing 301 n n C10 C11 MYS sing 302 n n C10 H101 MYS sing 303 n n C10 H102 MYS sing 304 n n C11 C12 MYS sing 305 n n C11 H111 MYS sing 306 n n C11 H112 MYS sing 307 n n C12 C13 MYS sing 308 n n C12 H121 MYS sing 309 n n C12 H122 MYS sing 310 n n C13 C14 MYS sing 311 n n C13 H131 MYS sing 312 n n C13 H132 MYS sing 313 n n C14 C15 MYS sing 314 n n C14 H141 MYS sing 315 n n C14 H142 MYS sing 316 n n C15 H151 MYS sing 317 n n C15 H152 MYS sing 318 n n C15 H153 MYS sing 319 n n # _atom_sites.entry_id 5HXH _atom_sites.fract_transf_matrix[1][1] 0.006091 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001769 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021355 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01074 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 401 1 CA CA . D 3 1PE A 1 402 1 1PE PEG . E 4 MYS A 1 403 1 MYS FAT . F 4 MYS A 1 404 3 MYS FAT . G 4 MYS A 1 405 4 MYS FAT . H 2 CA B 1 401 1 CA CA . I 3 1PE B 1 402 2 1PE PEG . J 3 1PE B 1 403 3 1PE PEG . K 3 1PE B 1 404 1 1PE PEG . L 5 OLC B 1 405 1 OLC MON . M 5 OLC B 1 406 1 OLC MON . N 4 MYS B 1 407 5 MYS FAT . O 6 HOH A 1 501 51 HOH HOH . O 6 HOH A 2 502 27 HOH HOH . O 6 HOH A 3 503 20 HOH HOH . O 6 HOH A 4 504 55 HOH HOH . O 6 HOH A 5 505 7 HOH HOH . O 6 HOH A 6 506 30 HOH HOH . O 6 HOH A 7 507 49 HOH HOH . O 6 HOH A 8 508 31 HOH HOH . O 6 HOH A 9 509 54 HOH HOH . O 6 HOH A 10 510 2 HOH HOH . O 6 HOH A 11 511 50 HOH HOH . O 6 HOH A 12 512 1 HOH HOH . O 6 HOH A 13 513 40 HOH HOH . O 6 HOH A 14 514 18 HOH HOH . O 6 HOH A 15 515 45 HOH HOH . O 6 HOH A 16 516 43 HOH HOH . O 6 HOH A 17 517 42 HOH HOH . O 6 HOH A 18 518 44 HOH HOH . O 6 HOH A 19 519 46 HOH HOH . O 6 HOH A 20 520 39 HOH HOH . O 6 HOH A 21 521 6 HOH HOH . O 6 HOH A 22 522 28 HOH HOH . O 6 HOH A 23 523 9 HOH HOH . O 6 HOH A 24 524 13 HOH HOH . O 6 HOH A 25 525 35 HOH HOH . O 6 HOH A 26 526 33 HOH HOH . O 6 HOH A 27 527 41 HOH HOH . O 6 HOH A 28 528 14 HOH HOH . O 6 HOH A 29 529 37 HOH HOH . O 6 HOH A 30 530 26 HOH HOH . O 6 HOH A 31 531 47 HOH HOH . O 6 HOH A 32 532 48 HOH HOH . O 6 HOH A 33 533 34 HOH HOH . P 6 HOH B 1 501 53 HOH HOH . P 6 HOH B 2 502 52 HOH HOH . P 6 HOH B 3 503 22 HOH HOH . P 6 HOH B 4 504 32 HOH HOH . P 6 HOH B 5 505 10 HOH HOH . P 6 HOH B 6 506 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 MYS . . . E 4 -59.145 -3.855 29.617 1 30.88 ? C2 MYS 403 A 1 HETATM 2 C C3 MYS . . . E 4 -58.438 -3.502 30.928 1 53.51 ? C3 MYS 403 A 1 HETATM 3 C C4 MYS . . . E 4 -59.436 -3.55 32.098 1 44.23 ? C4 MYS 403 A 1 HETATM 4 C C5 MYS . . . E 4 -58.883 -3.211 33.513 1 44.64 ? C5 MYS 403 A 1 HETATM 5 C C6 MYS . . . E 4 -57.781 -4.116 34.139 1 39.26 ? C6 MYS 403 A 1 HETATM 6 C C7 MYS . . . E 4 -56.439 -4.185 33.387 1 30.01 ? C7 MYS 403 A 1 HETATM 7 C C8 MYS . . . E 4 -55.327 -5.081 33.996 1 31.46 ? C8 MYS 403 A 1 HETATM 8 C C9 MYS . . . E 4 -54.745 -4.739 35.393 1 32.13 ? C9 MYS 403 A 1 HETATM 9 C C10 MYS . . . E 4 -55.701 -4.773 36.591 1 34.4 ? C10 MYS 403 A 1 HETATM 10 C C11 MYS . . . E 4 -54.911 -4.414 37.856 1 29.34 ? C11 MYS 403 A 1 HETATM 11 C C12 MYS . . . E 4 -55.83 -4.437 39.079 1 26.13 ? C12 MYS 403 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 42 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 11 #