data_5HXS # _model_server_result.job_id Tsl0ZUK-eoeNKkMQnOuy0Q _model_server_result.datetime_utc '2024-11-23 02:42:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hxs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":410}' # _entry.id 5HXS # _exptl.entry_id 5HXS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.2 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HXS _cell.length_a 49.516 _cell.length_b 72.353 _cell.length_c 96 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HXS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 50 A THR 50 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc2 A OE1 GLU 54 A GLU 54 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc3 A OE2 GLU 54 A GLU 54 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc4 A O ILE 118 A ILE 118 1_555 C SR SR . A SR 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc5 A OD1 ASP 121 A ASP 121 1_555 C SR SR . A SR 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc6 A O GLY 122 A GLY 122 1_555 C SR SR . A SR 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.707 ? metalc ? metalc7 A OD2 ASP 127 A ASP 127 1_555 C SR SR . A SR 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc8 A O THR 209 A THR 209 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc9 A OE1 GLU 213 A GLU 213 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc10 A OE2 GLU 213 A GLU 213 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc11 C SR SR . A SR 402 1_555 N O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.985 ? # _chem_comp.formula 'C7 H16 O4' _chem_comp.formula_weight 164.2 _chem_comp.id TOE _chem_comp.mon_nstd_flag . _chem_comp.name 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CK' OI' TOE sing 416 n n OI' CH' TOE sing 417 n n CH' CG' TOE sing 418 n n CG' OF' TOE sing 419 n n CE' OF' TOE sing 420 n n CE' CD' TOE sing 421 n n CA' O2' TOE sing 422 n n CA' CB' TOE sing 423 n n OC' CB' TOE sing 424 n n OC' CD' TOE sing 425 n n O2' H1 TOE sing 426 n n CA' H2 TOE sing 427 n n CA' H3 TOE sing 428 n n CB' H4 TOE sing 429 n n CB' H5 TOE sing 430 n n CD' H6 TOE sing 431 n n CD' H7 TOE sing 432 n n CE' H8 TOE sing 433 n n CE' H9 TOE sing 434 n n CG' H10 TOE sing 435 n n CG' H11 TOE sing 436 n n CH' H12 TOE sing 437 n n CH' H13 TOE sing 438 n n CK' H14 TOE sing 439 n n CK' H15 TOE sing 440 n n CK' H16 TOE sing 441 n n # _atom_sites.entry_id 5HXS _atom_sites.fract_transf_matrix[1][1] 0.020195 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013821 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010417 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SR A 1 401 3 SR SR . C 2 SR A 1 402 4 SR SR . D 3 MYS A 1 403 5 MYS FAT . E 3 MYS A 1 404 18 MYS FAT . F 3 MYS A 1 405 19 MYS FAT . G 3 MYS A 1 406 22 MYS FAT . H 3 MYS A 1 407 23 MYS FAT . I 3 MYS A 1 408 25 MYS FAT . J 3 MYS A 1 409 26 MYS FAT . K 4 TOE A 1 410 1 TOE PEG . L 5 OLC A 1 411 1 OLC MON . M 5 OLC A 1 412 2 OLC MON . N 6 HOH A 1 501 4 HOH HOH . N 6 HOH A 2 502 1 HOH HOH . N 6 HOH A 3 503 3 HOH HOH . N 6 HOH A 4 504 6 HOH HOH . N 6 HOH A 5 505 7 HOH HOH . N 6 HOH A 6 506 2 HOH HOH . N 6 HOH A 7 507 9 HOH HOH . N 6 HOH A 8 508 10 HOH HOH . N 6 HOH A 9 509 5 HOH HOH . N 6 HOH A 10 510 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2' TOE . . . K 4 14.046 34.081 7.743 1 72.86 ? O2' TOE 410 A 1 HETATM 2 C CA' TOE . . . K 4 13.761 32.702 7.996 1 74.76 ? CA' TOE 410 A 1 HETATM 3 C CB' TOE . . . K 4 14.171 32.345 9.428 1 75.42 ? CB' TOE 410 A 1 HETATM 4 O OC' TOE . . . K 4 13.881 30.966 9.681 1 70.15 ? OC' TOE 410 A 1 HETATM 5 C CD' TOE . . . K 4 14.305 30.562 10.991 1 59.49 ? CD' TOE 410 A 1 HETATM 6 C CE' TOE . . . K 4 13.157 30.645 12.009 1 63.13 ? CE' TOE 410 A 1 HETATM 7 O OF' TOE . . . K 4 12.653 31.979 12.145 1 69.74 ? OF' TOE 410 A 1 HETATM 8 C CG' TOE . . . K 4 11.535 31.942 13.041 1 68.38 ? CG' TOE 410 A 1 HETATM 9 C CH' TOE . . . K 4 11.222 33.347 13.568 1 77.29 ? CH' TOE 410 A 1 HETATM 10 O OI' TOE . . . K 4 10.904 34.228 12.486 1 81.5 ? OI' TOE 410 A 1 HETATM 11 C CK' TOE . . . K 4 10.598 35.525 13.008 1 70.12 ? CK' TOE 410 A 1 # _model_server_stats.io_time_ms 36 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #