data_5HXS
#
_model_server_result.job_id            5ew48B_tb7lgh4ukHEY5qw 
_model_server_result.datetime_utc      '2024-11-05 00:18:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5hxs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":411}' 
#
_entry.id    5HXS 
#
_exptl.entry_id    5HXS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5HXS 
_cell.length_a            49.516 
_cell.length_b            72.353 
_cell.length_c            96 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5HXS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 L N N 
? 5 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O THR 50 A THR 50 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? 
metalc ? metalc2 A OE1 GLU 54 A GLU 54 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc3 A OE2 GLU 54 A GLU 54 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? 
metalc ? metalc4 A O ILE 118 A ILE 118 1_555 C SR SR . A SR 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? 
metalc ? metalc5 A OD1 ASP 121 A ASP 121 1_555 C SR SR . A SR 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? 
metalc ? metalc6 A O GLY 122 A GLY 122 1_555 C SR SR . A SR 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.707 ? 
metalc ? metalc7 A OD2 ASP 127 A ASP 127 1_555 C SR SR . A SR 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? 
metalc ? metalc8 A O THR 209 A THR 209 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? 
metalc ? metalc9 A OE1 GLU 213 A GLU 213 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? 
metalc ? metalc10 A OE2 GLU 213 A GLU 213 1_555 B SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? 
metalc ? metalc11 C SR SR . A SR 402 1_555 N O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.985 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 283 n n 
C10 C9 OLC doub 284 n n 
C10 C11 OLC sing 285 n n 
C9 C8 OLC sing 286 n n 
C17 C16 OLC sing 287 z n 
C11 C12 OLC sing 288 n n 
C8 C7 OLC sing 289 n n 
C24 C22 OLC sing 290 n n 
C24 O25 OLC sing 291 n n 
C16 C15 OLC sing 292 n n 
C12 C13 OLC sing 293 n n 
C7 C6 OLC sing 294 n n 
C15 C14 OLC sing 295 n n 
C13 C14 OLC sing 296 n n 
C6 C5 OLC sing 297 n n 
C5 C4 OLC sing 298 n n 
C4 C3 OLC sing 299 n n 
C3 C2 OLC sing 300 n n 
C2 C1 OLC sing 301 n n 
C21 C22 OLC sing 302 n n 
C21 O20 OLC sing 303 n n 
C1 O19 OLC doub 304 n n 
C1 O20 OLC sing 305 n n 
C22 O23 OLC sing 306 n n 
C18 H18 OLC sing 307 n n 
C18 H18A OLC sing 308 n n 
C18 H18B OLC sing 309 n n 
C10 H10 OLC sing 310 n n 
C9 H9 OLC sing 311 n n 
C17 H17 OLC sing 312 n n 
C17 H17A OLC sing 313 n n 
C11 H11 OLC sing 314 n n 
C11 H11A OLC sing 315 n n 
C8 H8 OLC sing 316 n n 
C8 H8A OLC sing 317 n n 
C24 H24 OLC sing 318 n n 
C24 H24A OLC sing 319 n n 
C16 H16 OLC sing 320 n n 
C16 H16A OLC sing 321 n n 
C12 H12 OLC sing 322 n n 
C12 H12A OLC sing 323 n n 
C7 H7 OLC sing 324 n n 
C7 H7A OLC sing 325 n n 
C15 H15 OLC sing 326 n n 
C15 H15A OLC sing 327 n n 
C13 H13 OLC sing 328 n n 
C13 H13A OLC sing 329 n n 
C6 H6 OLC sing 330 n n 
C6 H6A OLC sing 331 n n 
C14 H14 OLC sing 332 n n 
C14 H14A OLC sing 333 n n 
C5 H5 OLC sing 334 n n 
C5 H5A OLC sing 335 n n 
C4 H4 OLC sing 336 n n 
C4 H4A OLC sing 337 n n 
C3 H3 OLC sing 338 n n 
C3 H3A OLC sing 339 n n 
C2 H2 OLC sing 340 n n 
C2 H2A OLC sing 341 n n 
C21 H21 OLC sing 342 n n 
C21 H21A OLC sing 343 n n 
C22 H22 OLC sing 344 n n 
O25 HO25 OLC sing 345 n n 
O23 HO23 OLC sing 346 n n 
#
_atom_sites.entry_id                     5HXS 
_atom_sites.fract_transf_matrix[1][1]    0.020195 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013821 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010417 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SR A 1 401 3 SR SR . 
C 2 SR A 1 402 4 SR SR . 
D 3 MYS A 1 403 5 MYS FAT . 
E 3 MYS A 1 404 18 MYS FAT . 
F 3 MYS A 1 405 19 MYS FAT . 
G 3 MYS A 1 406 22 MYS FAT . 
H 3 MYS A 1 407 23 MYS FAT . 
I 3 MYS A 1 408 25 MYS FAT . 
J 3 MYS A 1 409 26 MYS FAT . 
K 4 TOE A 1 410 1 TOE PEG . 
L 5 OLC A 1 411 1 OLC MON . 
M 5 OLC A 1 412 2 OLC MON . 
N 6 HOH A 1 501 4 HOH HOH . 
N 6 HOH A 2 502 1 HOH HOH . 
N 6 HOH A 3 503 3 HOH HOH . 
N 6 HOH A 4 504 6 HOH HOH . 
N 6 HOH A 5 505 7 HOH HOH . 
N 6 HOH A 6 506 2 HOH HOH . 
N 6 HOH A 7 507 9 HOH HOH . 
N 6 HOH A 8 508 10 HOH HOH . 
N 6 HOH A 9 509 5 HOH HOH . 
N 6 HOH A 10 510 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 OLC . . . L 5 -10.256 2.97 20.978 1 71.5 ? C18 OLC 411 A 1 
HETATM 2 C C10 OLC . . . L 5 -14.928 5.431 23.64 1 76.63 ? C10 OLC 411 A 1 
HETATM 3 C C9 OLC . . . L 5 -14.801 4.913 25.086 1 77.89 ? C9 OLC 411 A 1 
HETATM 4 C C17 OLC . . . L 5 -10.285 4.436 20.538 1 79.1 ? C17 OLC 411 A 1 
HETATM 5 C C11 OLC . . . L 5 -14.863 6.963 23.465 1 73.5 ? C11 OLC 411 A 1 
HETATM 6 C C8 OLC . . . L 5 -14.622 6.023 26.123 1 69.67 ? C8 OLC 411 A 1 
HETATM 7 C C24 OLC . . . L 5 -10.838 5.285 32.712 1 72.95 ? C24 OLC 411 A 1 
HETATM 8 C C16 OLC . . . L 5 -11.456 5.135 21.227 1 76.05 ? C16 OLC 411 A 1 
HETATM 9 C C12 OLC . . . L 5 -15.117 7.264 21.983 1 78.21 ? C12 OLC 411 A 1 
HETATM 10 C C7 OLC . . . L 5 -14.241 5.445 27.49 1 71.42 ? C7 OLC 411 A 1 
HETATM 11 C C15 OLC . . . L 5 -11.508 6.609 20.825 1 67.79 ? C15 OLC 411 A 1 
HETATM 12 C C13 OLC . . . L 5 -14.005 6.612 21.16 1 82.97 ? C13 OLC 411 A 1 
HETATM 13 C C6 OLC . . . L 5 -15.338 4.539 28.064 1 74.76 ? C6 OLC 411 A 1 
HETATM 14 C C14 OLC . . . L 5 -12.679 7.257 21.567 1 73.76 ? C14 OLC 411 A 1 
HETATM 15 C C5 OLC . . . L 5 -14.88 4.042 29.441 1 78.15 ? C5 OLC 411 A 1 
HETATM 16 C C4 OLC . . . L 5 -14.613 5.282 30.303 1 72.53 ? C4 OLC 411 A 1 
HETATM 17 C C3 OLC . . . L 5 -15.856 6.166 30.473 1 81.59 ? C3 OLC 411 A 1 
HETATM 18 C C2 OLC . . . L 5 -15.619 7.485 31.265 1 87.9 ? C2 OLC 411 A 1 
HETATM 19 C C21 OLC . . . L 5 -12.977 6.599 32.744 1 84.36 ? C21 OLC 411 A 1 
HETATM 20 C C1 OLC . . . L 5 -15.184 7.501 32.755 1 94.7 ? C1 OLC 411 A 1 
HETATM 21 C C22 OLC . . . L 5 -12.267 5.342 33.245 1 75.29 ? C22 OLC 411 A 1 
HETATM 22 O O19 OLC . . . L 5 -15.579 8.43 33.458 1 98.04 ? O19 OLC 411 A 1 
HETATM 23 O O25 OLC . . . L 5 -10.215 4.088 33.189 1 79.79 ? O25 OLC 411 A 1 
HETATM 24 O O23 OLC . . . L 5 -12.209 5.401 34.673 1 79.35 ? O23 OLC 411 A 1 
HETATM 25 O O20 OLC . . . L 5 -14.321 6.56 33.241 1 91.05 ? O20 OLC 411 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           25 
#