data_5HXW # _model_server_result.job_id h2mZGaK79yP3cYCJkOR9LQ _model_server_result.datetime_utc '2025-01-10 22:29:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hxw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":501}' # _entry.id 5HXW # _exptl.entry_id 5HXW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 64.52 _cell.angle_beta 73.06 _cell.angle_gamma 61.17 _cell.entry_id 5HXW _cell.length_a 100.314 _cell.length_b 104.575 _cell.length_c 105.419 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HXW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,H,I,J,BA 1 1 B,K,L,M,N,O,P,CA 2 1 C,Q,R,DA 3 1 D,S,T,U,V,EA 4 1 E,W,X,FA 5 1 F,Y,Z,AA,GA 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 K N N ? 2 Q N N ? 2 S N N ? 2 W N N ? 2 Y N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 144 n n PA O2A FAD sing 145 n n PA O5B FAD sing 146 n n PA O3P FAD sing 147 n n O2A HOA2 FAD sing 148 n n O5B C5B FAD sing 149 n n C5B C4B FAD sing 150 n n C5B H51A FAD sing 151 n n C5B H52A FAD sing 152 n n C4B O4B FAD sing 153 n n C4B C3B FAD sing 154 n n C4B H4B FAD sing 155 n n O4B C1B FAD sing 156 n n C3B O3B FAD sing 157 n n C3B C2B FAD sing 158 n n C3B H3B FAD sing 159 n n O3B HO3A FAD sing 160 n n C2B O2B FAD sing 161 n n C2B C1B FAD sing 162 n n C2B H2B FAD sing 163 n n O2B HO2A FAD sing 164 n n C1B N9A FAD sing 165 n n C1B H1B FAD sing 166 n n N9A C8A FAD sing 167 n y N9A C4A FAD sing 168 n y C8A N7A FAD doub 169 n y C8A H8A FAD sing 170 n n N7A C5A FAD sing 171 n y C5A C6A FAD sing 172 n y C5A C4A FAD doub 173 n y C6A N6A FAD sing 174 n n C6A N1A FAD doub 175 n y N6A H61A FAD sing 176 n n N6A H62A FAD sing 177 n n N1A C2A FAD sing 178 n y C2A N3A FAD doub 179 n y C2A H2A FAD sing 180 n n N3A C4A FAD sing 181 n y N1 C2 FAD sing 182 n n N1 C10 FAD doub 183 n n C2 O2 FAD doub 184 n n C2 N3 FAD sing 185 n n N3 C4 FAD sing 186 n n N3 HN3 FAD sing 187 n n C4 O4 FAD doub 188 n n C4 C4X FAD sing 189 n n C4X N5 FAD doub 190 n n C4X C10 FAD sing 191 n n N5 C5X FAD sing 192 n n C5X C6 FAD doub 193 n y C5X C9A FAD sing 194 n y C6 C7 FAD sing 195 n y C6 H6 FAD sing 196 n n C7 C7M FAD sing 197 n n C7 C8 FAD doub 198 n y C7M HM71 FAD sing 199 n n C7M HM72 FAD sing 200 n n C7M HM73 FAD sing 201 n n C8 C8M FAD sing 202 n n C8 C9 FAD sing 203 n y C8M HM81 FAD sing 204 n n C8M HM82 FAD sing 205 n n C8M HM83 FAD sing 206 n n C9 C9A FAD doub 207 n y C9 H9 FAD sing 208 n n C9A N10 FAD sing 209 n n N10 C10 FAD sing 210 n n N10 C1' FAD sing 211 n n C1' C2' FAD sing 212 n n C1' "H1'1" FAD sing 213 n n C1' "H1'2" FAD sing 214 n n C2' O2' FAD sing 215 n n C2' C3' FAD sing 216 n n C2' H2' FAD sing 217 n n O2' HO2' FAD sing 218 n n C3' O3' FAD sing 219 n n C3' C4' FAD sing 220 n n C3' H3' FAD sing 221 n n O3' HO3' FAD sing 222 n n C4' O4' FAD sing 223 n n C4' C5' FAD sing 224 n n C4' H4' FAD sing 225 n n O4' HO4' FAD sing 226 n n C5' O5' FAD sing 227 n n C5' "H5'1" FAD sing 228 n n C5' "H5'2" FAD sing 229 n n O5' P FAD sing 230 n n P O1P FAD doub 231 n n P O2P FAD sing 232 n n P O3P FAD sing 233 n n O2P HOP2 FAD sing 234 n n # _atom_sites.entry_id 5HXW _atom_sites.fract_transf_matrix[1][1] 0.009969 _atom_sites.fract_transf_matrix[1][2] -0.005487 _atom_sites.fract_transf_matrix[1][3] -0.001216 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010915 _atom_sites.fract_transf_matrix[2][3] -0.00402 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010568 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 FAD A 1 501 500 FAD FAD . H 3 16A A 1 502 5 16A 16A . I 3 16A A 1 503 8 16A 16A . J 3 16A A 1 504 13 16A 16A . K 2 FAD B 1 501 500 FAD FAD . L 3 16A B 1 502 1 16A 16A . M 3 16A B 1 503 2 16A 16A . N 3 16A B 1 504 3 16A 16A . O 3 16A B 1 505 7 16A 16A . P 3 16A B 1 506 11 16A 16A . Q 2 FAD C 1 501 500 FAD FAD . R 3 16A C 1 502 10 16A 16A . S 2 FAD D 1 501 500 FAD FAD . T 3 16A D 1 502 4 16A 16A . U 3 16A D 1 503 6 16A 16A . V 3 16A D 1 504 15 16A 16A . W 2 FAD E 1 501 500 FAD FAD . X 3 16A E 1 502 14 16A 16A . Y 2 FAD F 1 501 500 FAD FAD . Z 3 16A F 1 502 9 16A 16A . AA 3 16A F 1 503 12 16A 16A . BA 4 HOH A 1 601 18 HOH HOH . BA 4 HOH A 2 602 90 HOH HOH . BA 4 HOH A 3 603 96 HOH HOH . BA 4 HOH A 4 604 4 HOH HOH . BA 4 HOH A 5 605 34 HOH HOH . BA 4 HOH A 6 606 51 HOH HOH . BA 4 HOH A 7 607 9 HOH HOH . BA 4 HOH A 8 608 89 HOH HOH . BA 4 HOH A 9 609 88 HOH HOH . BA 4 HOH A 10 610 69 HOH HOH . BA 4 HOH A 11 611 83 HOH HOH . BA 4 HOH A 12 612 42 HOH HOH . BA 4 HOH A 13 613 54 HOH HOH . BA 4 HOH A 14 614 104 HOH HOH . BA 4 HOH A 15 615 115 HOH HOH . BA 4 HOH A 16 616 38 HOH HOH . BA 4 HOH A 17 617 36 HOH HOH . BA 4 HOH A 18 618 50 HOH HOH . BA 4 HOH A 19 619 124 HOH HOH . BA 4 HOH A 20 620 64 HOH HOH . BA 4 HOH A 21 621 108 HOH HOH . BA 4 HOH A 22 622 21 HOH HOH . BA 4 HOH A 23 623 65 HOH HOH . BA 4 HOH A 24 624 46 HOH HOH . BA 4 HOH A 25 625 7 HOH HOH . BA 4 HOH A 26 626 40 HOH HOH . BA 4 HOH A 27 627 17 HOH HOH . BA 4 HOH A 28 628 25 HOH HOH . CA 4 HOH B 1 601 41 HOH HOH . CA 4 HOH B 2 602 84 HOH HOH . CA 4 HOH B 3 603 29 HOH HOH . CA 4 HOH B 4 604 52 HOH HOH . CA 4 HOH B 5 605 107 HOH HOH . CA 4 HOH B 6 606 26 HOH HOH . CA 4 HOH B 7 607 6 HOH HOH . CA 4 HOH B 8 608 86 HOH HOH . CA 4 HOH B 9 609 75 HOH HOH . CA 4 HOH B 10 610 31 HOH HOH . CA 4 HOH B 11 611 111 HOH HOH . CA 4 HOH B 12 612 1 HOH HOH . CA 4 HOH B 13 613 28 HOH HOH . CA 4 HOH B 14 614 101 HOH HOH . CA 4 HOH B 15 615 8 HOH HOH . CA 4 HOH B 16 616 63 HOH HOH . CA 4 HOH B 17 617 14 HOH HOH . CA 4 HOH B 18 618 70 HOH HOH . DA 4 HOH C 1 601 2 HOH HOH . DA 4 HOH C 2 602 85 HOH HOH . DA 4 HOH C 3 603 98 HOH HOH . DA 4 HOH C 4 604 87 HOH HOH . DA 4 HOH C 5 605 82 HOH HOH . DA 4 HOH C 6 606 71 HOH HOH . DA 4 HOH C 7 607 11 HOH HOH . DA 4 HOH C 8 608 24 HOH HOH . DA 4 HOH C 9 609 106 HOH HOH . DA 4 HOH C 10 610 19 HOH HOH . DA 4 HOH C 11 611 10 HOH HOH . DA 4 HOH C 12 612 20 HOH HOH . DA 4 HOH C 13 613 33 HOH HOH . DA 4 HOH C 14 614 12 HOH HOH . DA 4 HOH C 15 615 73 HOH HOH . DA 4 HOH C 16 616 39 HOH HOH . DA 4 HOH C 17 617 62 HOH HOH . DA 4 HOH C 18 618 22 HOH HOH . DA 4 HOH C 19 619 72 HOH HOH . EA 4 HOH D 1 601 49 HOH HOH . EA 4 HOH D 2 602 81 HOH HOH . EA 4 HOH D 3 603 99 HOH HOH . EA 4 HOH D 4 604 91 HOH HOH . EA 4 HOH D 5 605 47 HOH HOH . EA 4 HOH D 6 606 113 HOH HOH . EA 4 HOH D 7 607 117 HOH HOH . EA 4 HOH D 8 608 80 HOH HOH . EA 4 HOH D 9 609 61 HOH HOH . EA 4 HOH D 10 610 13 HOH HOH . EA 4 HOH D 11 611 56 HOH HOH . EA 4 HOH D 12 612 44 HOH HOH . EA 4 HOH D 13 613 66 HOH HOH . EA 4 HOH D 14 614 60 HOH HOH . EA 4 HOH D 15 615 27 HOH HOH . EA 4 HOH D 16 616 59 HOH HOH . FA 4 HOH E 1 601 76 HOH HOH . FA 4 HOH E 2 602 37 HOH HOH . FA 4 HOH E 3 603 122 HOH HOH . FA 4 HOH E 4 604 77 HOH HOH . FA 4 HOH E 5 605 93 HOH HOH . FA 4 HOH E 6 606 3 HOH HOH . FA 4 HOH E 7 607 58 HOH HOH . FA 4 HOH E 8 608 16 HOH HOH . FA 4 HOH E 9 609 53 HOH HOH . FA 4 HOH E 10 610 45 HOH HOH . FA 4 HOH E 11 611 43 HOH HOH . FA 4 HOH E 12 612 123 HOH HOH . FA 4 HOH E 13 613 67 HOH HOH . FA 4 HOH E 14 614 127 HOH HOH . FA 4 HOH E 15 615 68 HOH HOH . GA 4 HOH F 1 601 30 HOH HOH . GA 4 HOH F 2 602 79 HOH HOH . GA 4 HOH F 3 603 97 HOH HOH . GA 4 HOH F 4 604 5 HOH HOH . GA 4 HOH F 5 605 125 HOH HOH . GA 4 HOH F 6 606 32 HOH HOH . GA 4 HOH F 7 607 55 HOH HOH . GA 4 HOH F 8 608 78 HOH HOH . GA 4 HOH F 9 609 35 HOH HOH . GA 4 HOH F 10 610 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . Q 2 -22.122 23.467 -30.721 1 58.84 ? PA FAD 501 C 1 HETATM 2 O O1A FAD . . . Q 2 -22.861 24.743 -30.38 1 59.94 ? O1A FAD 501 C 1 HETATM 3 O O2A FAD . . . Q 2 -22.832 22.15 -30.565 1 60.45 ? O2A FAD 501 C 1 HETATM 4 O O5B FAD . . . Q 2 -20.768 23.399 -29.856 1 58.51 ? O5B FAD 501 C 1 HETATM 5 C C5B FAD . . . Q 2 -19.966 24.555 -29.654 1 58.07 ? C5B FAD 501 C 1 HETATM 6 C C4B FAD . . . Q 2 -19.5 24.59 -28.208 1 58.54 ? C4B FAD 501 C 1 HETATM 7 O O4B FAD . . . Q 2 -18.332 25.408 -28.095 1 58.73 ? O4B FAD 501 C 1 HETATM 8 C C3B FAD . . . Q 2 -20.546 25.194 -27.281 1 58.48 ? C3B FAD 501 C 1 HETATM 9 O O3B FAD . . . Q 2 -20.817 24.233 -26.254 1 58.03 ? O3B FAD 501 C 1 HETATM 10 C C2B FAD . . . Q 2 -19.905 26.462 -26.726 1 57.91 ? C2B FAD 501 C 1 HETATM 11 O O2B FAD . . . Q 2 -20.202 26.65 -25.346 1 58.68 ? O2B FAD 501 C 1 HETATM 12 C C1B FAD . . . Q 2 -18.417 26.211 -26.914 1 58.09 ? C1B FAD 501 C 1 HETATM 13 N N9A FAD . . . Q 2 -17.578 27.426 -27.085 1 57.53 ? N9A FAD 501 C 1 HETATM 14 C C8A FAD . . . Q 2 -17.768 28.401 -27.989 1 57.09 ? C8A FAD 501 C 1 HETATM 15 N N7A FAD . . . Q 2 -16.817 29.36 -27.903 1 57.1 ? N7A FAD 501 C 1 HETATM 16 C C5A FAD . . . Q 2 -15.982 29.003 -26.921 1 57.33 ? C5A FAD 501 C 1 HETATM 17 C C6A FAD . . . Q 2 -14.761 29.575 -26.306 1 57.86 ? C6A FAD 501 C 1 HETATM 18 N N6A FAD . . . Q 2 -14.25 30.745 -26.752 1 57.6 ? N6A FAD 501 C 1 HETATM 19 N N1A FAD . . . Q 2 -14.178 28.885 -25.294 1 58.59 ? N1A FAD 501 C 1 HETATM 20 C C2A FAD . . . Q 2 -14.682 27.714 -24.846 1 58.8 ? C2A FAD 501 C 1 HETATM 21 N N3A FAD . . . Q 2 -15.792 27.139 -25.362 1 58.27 ? N3A FAD 501 C 1 HETATM 22 C C4A FAD . . . Q 2 -16.478 27.722 -26.383 1 57.52 ? C4A FAD 501 C 1 HETATM 23 N N1 FAD . . . Q 2 -28.32 18.781 -37.522 1 76.25 ? N1 FAD 501 C 1 HETATM 24 C C2 FAD . . . Q 2 -28.674 17.597 -38.078 1 78.31 ? C2 FAD 501 C 1 HETATM 25 O O2 FAD . . . Q 2 -27.777 16.907 -38.605 1 79.03 ? O2 FAD 501 C 1 HETATM 26 N N3 FAD . . . Q 2 -29.949 17.153 -38.077 1 80.58 ? N3 FAD 501 C 1 HETATM 27 C C4 FAD . . . Q 2 -30.957 17.853 -37.525 1 80.46 ? C4 FAD 501 C 1 HETATM 28 O O4 FAD . . . Q 2 -32.126 17.408 -37.544 1 83.27 ? O4 FAD 501 C 1 HETATM 29 C C4X FAD . . . Q 2 -30.651 19.166 -36.893 1 77.54 ? C4X FAD 501 C 1 HETATM 30 N N5 FAD . . . Q 2 -31.602 19.94 -36.312 1 77.04 ? N5 FAD 501 C 1 HETATM 31 C C5X FAD . . . Q 2 -31.288 21.136 -35.746 1 74.93 ? C5X FAD 501 C 1 HETATM 32 C C6 FAD . . . Q 2 -32.29 21.906 -35.154 1 74.88 ? C6 FAD 501 C 1 HETATM 33 C C7 FAD . . . Q 2 -31.98 23.13 -34.558 1 73.19 ? C7 FAD 501 C 1 HETATM 34 C C7M FAD . . . Q 2 -33.089 23.936 -33.93 1 73.57 ? C7M FAD 501 C 1 HETATM 35 C C8 FAD . . . Q 2 -30.563 23.618 -34.561 1 71.64 ? C8 FAD 501 C 1 HETATM 36 C C8M FAD . . . Q 2 -30.164 24.928 -33.937 1 70.52 ? C8M FAD 501 C 1 HETATM 37 C C9 FAD . . . Q 2 -29.562 22.852 -35.148 1 71.25 ? C9 FAD 501 C 1 HETATM 38 C C9A FAD . . . Q 2 -29.866 21.625 -35.74 1 72.81 ? C9A FAD 501 C 1 HETATM 39 N N10 FAD . . . Q 2 -28.855 20.828 -36.335 1 73.03 ? N10 FAD 501 C 1 HETATM 40 C C10 FAD . . . Q 2 -29.225 19.597 -36.928 1 75.55 ? C10 FAD 501 C 1 HETATM 41 C C1' FAD . . . Q 2 -27.461 21.289 -36.387 1 70.8 ? C1' FAD 501 C 1 HETATM 42 C C2' FAD . . . Q 2 -26.52 20.765 -35.319 1 69.44 ? C2' FAD 501 C 1 HETATM 43 O O2' FAD . . . Q 2 -27.156 20.82 -34.036 1 70.29 ? O2' FAD 501 C 1 HETATM 44 C C3' FAD . . . Q 2 -25.28 21.658 -35.298 1 67.09 ? C3' FAD 501 C 1 HETATM 45 O O3' FAD . . . Q 2 -24.857 21.994 -36.634 1 67.65 ? O3' FAD 501 C 1 HETATM 46 C C4' FAD . . . Q 2 -24.125 21.012 -34.543 1 65.08 ? C4' FAD 501 C 1 HETATM 47 O O4' FAD . . . Q 2 -24.513 20.708 -33.195 1 65.16 ? O4' FAD 501 C 1 HETATM 48 C C5' FAD . . . Q 2 -22.935 21.952 -34.511 1 62.38 ? C5' FAD 501 C 1 HETATM 49 O O5' FAD . . . Q 2 -22.007 21.462 -33.556 1 60.5 ? O5' FAD 501 C 1 HETATM 50 P P FAD . . . Q 2 -20.833 22.406 -33.021 1 58.72 ? P FAD 501 C 1 HETATM 51 O O1P FAD . . . Q 2 -20.027 21.579 -32.053 1 58.98 ? O1P FAD 501 C 1 HETATM 52 O O2P FAD . . . Q 2 -20.159 23.021 -34.213 1 59.16 ? O2P FAD 501 C 1 HETATM 53 O O3P FAD . . . Q 2 -21.595 23.595 -32.24 1 58.92 ? O3P FAD 501 C 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 53 #