data_5HZO # _model_server_result.job_id b9kouvgk5oqZDhJHBYGPGw _model_server_result.datetime_utc '2024-11-14 06:56:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hzo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 5HZO # _exptl.entry_id 5HZO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 496.589 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description UNDECYL-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HZO _cell.length_a 66.031 _cell.length_b 96.284 _cell.length_c 151.591 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HZO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PHE 64 A PHE 64 1_555 A N1 GYS 65 A GYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.362 ? covale ? covale2 A C3 GYS 65 A GYS 66 1_555 A N VAL 66 A VAL 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.421 ? covale ? covale3 B C PHE 64 B PHE 64 1_555 B N1 GYS 65 B GYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale4 B C3 GYS 65 B GYS 66 1_555 B N VAL 66 B VAL 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? # _chem_comp.formula 'C23 H44 O11' _chem_comp.formula_weight 496.589 _chem_comp.id UMQ _chem_comp.mon_nstd_flag . _chem_comp.name UNDECYL-MALTOSIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms UNDECYL-BETA-D-MALTOPYRANOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 O2 UMQ sing 410 n n C2 C1 UMQ sing 411 n n C2 C3 UMQ sing 412 n n C2 H21 UMQ sing 413 n n C4 C5 UMQ sing 414 n n C4 O4 UMQ sing 415 n n C4 C3 UMQ sing 416 n n C4 H41 UMQ sing 417 n n C5 C6 UMQ sing 418 n n C5 O5 UMQ sing 419 n n C5 H51 UMQ sing 420 n n C6 O6 UMQ sing 421 n n C6 H61 UMQ sing 422 n n C6 H62 UMQ sing 423 n n O2 HO21 UMQ sing 424 n n O4 HO41 UMQ sing 425 n n C1 O1 UMQ sing 426 n n C1 O5 UMQ sing 427 n n C1 H11 UMQ sing 428 n n C3 O3 UMQ sing 429 n n C3 H31 UMQ sing 430 n n O1 C4' UMQ sing 431 n n O3 HO31 UMQ sing 432 n n O6 HO61 UMQ sing 433 n n C1' C2' UMQ sing 434 n n C1' O1' UMQ sing 435 n n C1' O5' UMQ sing 436 n n C1' "H1'1" UMQ sing 437 n n C2' C3' UMQ sing 438 n n C2' O2' UMQ sing 439 n n C2' "H2'1" UMQ sing 440 n n C3' C4' UMQ sing 441 n n C3' O3' UMQ sing 442 n n C3' "H3'1" UMQ sing 443 n n C4' C5' UMQ sing 444 n n C4' "H4'1" UMQ sing 445 n n C5' C6' UMQ sing 446 n n C5' O5' UMQ sing 447 n n C5' "H5'1" UMQ sing 448 n n C6' O6' UMQ sing 449 n n C6' "H6'1" UMQ sing 450 n n C6' "H6'2" UMQ sing 451 n n O1' CA UMQ sing 452 n n O3' HO3' UMQ sing 453 n n O6' HO6' UMQ sing 454 n n O2' HO2' UMQ sing 455 n n CA CB UMQ sing 456 n n CA HA1 UMQ sing 457 n n CA HA2 UMQ sing 458 n n CB CC UMQ sing 459 n n CB HB1 UMQ sing 460 n n CB HB2 UMQ sing 461 n n CC CD UMQ sing 462 n n CC HC1 UMQ sing 463 n n CC HC2 UMQ sing 464 n n CD CF UMQ sing 465 n n CD HD1 UMQ sing 466 n n CD HD2 UMQ sing 467 n n CF CG UMQ sing 468 n n CF HF1 UMQ sing 469 n n CF HF2 UMQ sing 470 n n CG CH UMQ sing 471 n n CG HG1 UMQ sing 472 n n CG HG2 UMQ sing 473 n n CH CI UMQ sing 474 n n CH HH1 UMQ sing 475 n n CH HH2 UMQ sing 476 n n CI CJ UMQ sing 477 n n CI HI1 UMQ sing 478 n n CI HI2 UMQ sing 479 n n CJ CK UMQ sing 480 n n CJ HJ1 UMQ sing 481 n n CJ HJ2 UMQ sing 482 n n CK CL UMQ sing 483 n n CK HK1 UMQ sing 484 n n CK HK2 UMQ sing 485 n n CL HL1 UMQ sing 486 n n CL HL2 UMQ sing 487 n n CL HL3 UMQ sing 488 n n # _atom_sites.entry_id 5HZO _atom_sites.fract_transf_matrix[1][1] 0.015144 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010386 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006597 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MLT A 1 301 301 MLT MLT . D 3 UMQ B 1 301 1 UMQ UMQ . E 2 MLT B 1 302 301 MLT MLT . F 4 HOH A 1 401 57 HOH HOH . F 4 HOH A 2 402 93 HOH HOH . F 4 HOH A 3 403 13 HOH HOH . F 4 HOH A 4 404 7 HOH HOH . F 4 HOH A 5 405 94 HOH HOH . F 4 HOH A 6 406 10 HOH HOH . F 4 HOH A 7 407 4 HOH HOH . F 4 HOH A 8 408 2 HOH HOH . F 4 HOH A 9 409 3 HOH HOH . F 4 HOH A 10 410 73 HOH HOH . F 4 HOH A 11 411 5 HOH HOH . F 4 HOH A 12 412 8 HOH HOH . F 4 HOH A 13 413 50 HOH HOH . F 4 HOH A 14 414 23 HOH HOH . F 4 HOH A 15 415 96 HOH HOH . F 4 HOH A 16 416 26 HOH HOH . F 4 HOH A 17 417 6 HOH HOH . F 4 HOH A 18 418 97 HOH HOH . F 4 HOH A 19 419 11 HOH HOH . F 4 HOH A 20 420 72 HOH HOH . F 4 HOH A 21 421 113 HOH HOH . F 4 HOH A 22 422 120 HOH HOH . F 4 HOH A 23 423 64 HOH HOH . F 4 HOH A 24 424 45 HOH HOH . F 4 HOH A 25 425 38 HOH HOH . F 4 HOH A 26 426 60 HOH HOH . F 4 HOH A 27 427 103 HOH HOH . F 4 HOH A 28 428 123 HOH HOH . F 4 HOH A 29 429 111 HOH HOH . F 4 HOH A 30 430 110 HOH HOH . F 4 HOH A 31 431 122 HOH HOH . F 4 HOH A 32 432 98 HOH HOH . F 4 HOH A 33 433 62 HOH HOH . F 4 HOH A 34 434 116 HOH HOH . F 4 HOH A 35 435 12 HOH HOH . F 4 HOH A 36 436 106 HOH HOH . F 4 HOH A 37 437 52 HOH HOH . F 4 HOH A 38 438 24 HOH HOH . F 4 HOH A 39 439 129 HOH HOH . F 4 HOH A 40 440 17 HOH HOH . F 4 HOH A 41 441 107 HOH HOH . F 4 HOH A 42 442 53 HOH HOH . F 4 HOH A 43 443 35 HOH HOH . F 4 HOH A 44 444 58 HOH HOH . F 4 HOH A 45 445 30 HOH HOH . F 4 HOH A 46 446 117 HOH HOH . F 4 HOH A 47 447 65 HOH HOH . F 4 HOH A 48 448 51 HOH HOH . G 4 HOH B 1 401 100 HOH HOH . G 4 HOH B 2 402 47 HOH HOH . G 4 HOH B 3 403 77 HOH HOH . G 4 HOH B 4 404 92 HOH HOH . G 4 HOH B 5 405 115 HOH HOH . G 4 HOH B 6 406 126 HOH HOH . G 4 HOH B 7 407 76 HOH HOH . G 4 HOH B 8 408 102 HOH HOH . G 4 HOH B 9 409 118 HOH HOH . G 4 HOH B 10 410 40 HOH HOH . G 4 HOH B 11 411 67 HOH HOH . G 4 HOH B 12 412 91 HOH HOH . G 4 HOH B 13 413 121 HOH HOH . G 4 HOH B 14 414 124 HOH HOH . G 4 HOH B 15 415 78 HOH HOH . G 4 HOH B 16 416 42 HOH HOH . G 4 HOH B 17 417 29 HOH HOH . G 4 HOH B 18 418 32 HOH HOH . G 4 HOH B 19 419 127 HOH HOH . G 4 HOH B 20 420 15 HOH HOH . G 4 HOH B 21 421 95 HOH HOH . G 4 HOH B 22 422 1 HOH HOH . G 4 HOH B 23 423 74 HOH HOH . G 4 HOH B 24 424 14 HOH HOH . G 4 HOH B 25 425 31 HOH HOH . G 4 HOH B 26 426 27 HOH HOH . G 4 HOH B 27 427 128 HOH HOH . G 4 HOH B 28 428 37 HOH HOH . G 4 HOH B 29 429 68 HOH HOH . G 4 HOH B 30 430 81 HOH HOH . G 4 HOH B 31 431 109 HOH HOH . G 4 HOH B 32 432 25 HOH HOH . G 4 HOH B 33 433 43 HOH HOH . G 4 HOH B 34 434 41 HOH HOH . G 4 HOH B 35 435 59 HOH HOH . G 4 HOH B 36 436 28 HOH HOH . G 4 HOH B 37 437 125 HOH HOH . G 4 HOH B 38 438 18 HOH HOH . G 4 HOH B 39 439 101 HOH HOH . G 4 HOH B 40 440 20 HOH HOH . G 4 HOH B 41 441 69 HOH HOH . G 4 HOH B 42 442 104 HOH HOH . G 4 HOH B 43 443 112 HOH HOH . G 4 HOH B 44 444 36 HOH HOH . G 4 HOH B 45 445 63 HOH HOH . G 4 HOH B 46 446 119 HOH HOH . G 4 HOH B 47 447 48 HOH HOH . G 4 HOH B 48 448 49 HOH HOH . G 4 HOH B 49 449 130 HOH HOH . G 4 HOH B 50 450 9 HOH HOH . G 4 HOH B 51 451 21 HOH HOH . G 4 HOH B 52 452 34 HOH HOH . G 4 HOH B 53 453 79 HOH HOH . G 4 HOH B 54 454 19 HOH HOH . G 4 HOH B 55 455 22 HOH HOH . G 4 HOH B 56 456 16 HOH HOH . G 4 HOH B 57 457 108 HOH HOH . G 4 HOH B 58 458 46 HOH HOH . G 4 HOH B 59 459 105 HOH HOH . G 4 HOH B 60 460 75 HOH HOH . G 4 HOH B 61 461 80 HOH HOH . G 4 HOH B 62 462 33 HOH HOH . G 4 HOH B 63 463 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 UMQ . . . D 3 27.604 30.384 69.275 1 60.81 ? C2 UMQ 301 B 1 HETATM 2 C C4 UMQ . . . D 3 29.759 30.601 70.666 1 63.75 ? C4 UMQ 301 B 1 HETATM 3 C C5 UMQ . . . D 3 29.016 31.489 71.623 1 59.49 ? C5 UMQ 301 B 1 HETATM 4 C C6 UMQ . . . D 3 29.961 32.532 72.132 1 57.44 ? C6 UMQ 301 B 1 HETATM 5 O O2 UMQ . . . D 3 26.709 29.478 68.585 1 53.55 ? O2 UMQ 301 B 1 HETATM 6 O O4 UMQ . . . D 3 30.912 29.973 71.379 1 58.43 ? O4 UMQ 301 B 1 HETATM 7 C C1 UMQ . . . D 3 26.868 31.318 70.312 1 67.73 ? C1 UMQ 301 B 1 HETATM 8 C C3 UMQ . . . D 3 28.722 29.601 69.993 1 62.48 ? C3 UMQ 301 B 1 HETATM 9 O O1 UMQ . . . D 3 25.968 30.618 71.383 1 76.74 ? O1 UMQ 301 B 1 HETATM 10 O O3 UMQ . . . D 3 29.334 28.746 69.056 1 59.53 ? O3 UMQ 301 B 1 HETATM 11 O O5 UMQ . . . D 3 27.934 32.187 70.901 1 62.95 ? O5 UMQ 301 B 1 HETATM 12 O O6 UMQ . . . D 3 30.355 32.162 73.452 1 58.84 ? O6 UMQ 301 B 1 HETATM 13 C C1' UMQ . . . D 3 22.44 32.306 73.343 1 80.19 ? C1' UMQ 301 B 1 HETATM 14 C C2' UMQ . . . D 3 22.147 31.091 72.435 1 71.6 ? C2' UMQ 301 B 1 HETATM 15 C C3' UMQ . . . D 3 23.459 30.288 72.192 1 72.43 ? C3' UMQ 301 B 1 HETATM 16 C C4' UMQ . . . D 3 24.635 31.249 71.756 1 72.62 ? C4' UMQ 301 B 1 HETATM 17 C C5' UMQ . . . D 3 24.778 32.145 72.938 1 68.93 ? C5' UMQ 301 B 1 HETATM 18 C C6' UMQ . . . D 3 25.968 33.018 72.827 1 62.4 ? C6' UMQ 301 B 1 HETATM 19 O O1' UMQ . . . D 3 21.393 33.359 73.326 1 82.09 ? O1' UMQ 301 B 1 HETATM 20 O O3' UMQ . . . D 3 23.201 29.308 71.213 1 76.35 ? O3' UMQ 301 B 1 HETATM 21 O O5' UMQ . . . D 3 23.655 32.988 72.925 1 75.26 ? O5' UMQ 301 B 1 HETATM 22 O O6' UMQ . . . D 3 26.932 32.165 73.407 1 61.01 ? O6' UMQ 301 B 1 HETATM 23 O O2' UMQ . . . D 3 21.155 30.257 73.055 1 63.26 ? O2' UMQ 301 B 1 HETATM 24 C CA UMQ . . . D 3 21.447 34.2 74.519 1 84.45 ? CA UMQ 301 B 1 HETATM 25 C CB UMQ . . . D 3 22.708 35.117 74.518 1 82.11 ? CB UMQ 301 B 1 HETATM 26 C CC UMQ . . . D 3 23.917 34.44 75.206 1 79.18 ? CC UMQ 301 B 1 HETATM 27 C CD UMQ . . . D 3 25.034 35.489 75.299 1 76.79 ? CD UMQ 301 B 1 HETATM 28 C CF UMQ . . . D 3 26.142 35.052 76.273 1 73.29 ? CF UMQ 301 B 1 HETATM 29 C CG UMQ . . . D 3 27.02 33.92 75.76 1 69.46 ? CG UMQ 301 B 1 HETATM 30 C CH UMQ . . . D 3 28.182 33.788 76.788 1 65.15 ? CH UMQ 301 B 1 HETATM 31 C CI UMQ . . . D 3 28.851 32.414 76.608 1 61.78 ? CI UMQ 301 B 1 HETATM 32 C CJ UMQ . . . D 3 29.535 32.068 77.909 1 53.5 ? CJ UMQ 301 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 32 #