data_5HZT # _model_server_result.job_id FpPM434O1Pn2tHnrKLWgZA _model_server_result.datetime_utc '2024-10-18 21:21:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hzt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":302}' # _entry.id 5HZT # _exptl.entry_id 5HZT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 24 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 115.89 _cell.angle_beta 107.68 _cell.angle_gamma 94.12 _cell.entry_id 5HZT _cell.length_a 72.268 _cell.length_b 105.961 _cell.length_c 108.03 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HZT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 PISA monomeric 1 author_and_software_defined_assembly 7 PISA monomeric 1 author_and_software_defined_assembly 8 PISA monomeric 1 author_and_software_defined_assembly 9 PISA monomeric 1 author_and_software_defined_assembly 10 PISA monomeric 1 author_and_software_defined_assembly 11 PISA monomeric 1 author_and_software_defined_assembly 12 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,M,N,KA 1 1 B,O,P,LA 2 1 C,Q,R,MA 3 1 D,S,T,NA 4 1 E,U,V,OA 5 1 F,W,X,PA 6 1 G,Y,Z,QA 7 1 H,AA,BA,RA 8 1 I,CA,DA,SA 9 1 J,EA,FA,TA 10 1 K,GA,HA,UA 11 1 L,IA,JA,VA 12 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N ? 2 BA N N ? 2 CA N N ? 2 DA N N ? 2 EA N N ? 2 FA N N ? 2 GA N N ? 2 HA N N ? 2 IA N N ? 2 JA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PHE 60 A PHE 61 1_555 A N1 GYS 61 A GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.276 ? covale ? covale2 A C3 GYS 61 A GYS 62 1_555 A N ASN 62 A ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.283 ? covale ? covale3 B O GLY 47 B GLY 48 1_555 L NE ARG 132 L ARG 135 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 1.478 ? covale ? covale4 B C PHE 60 B PHE 61 1_555 B N1 GYS 61 B GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.283 ? covale ? covale5 B C3 GYS 61 B GYS 62 1_555 B N ASN 62 B ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.274 ? covale ? covale6 C C PHE 60 C PHE 61 1_555 C N1 GYS 61 C GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.283 ? covale ? covale7 C C3 GYS 61 C GYS 62 1_555 C N ASN 62 C ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.274 ? covale ? covale8 D C PHE 60 D PHE 61 1_555 D N1 GYS 61 D GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.281 ? covale ? covale9 D C3 GYS 61 D GYS 62 1_555 D N ASN 62 D ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.277 ? covale ? covale10 E C PHE 60 E PHE 61 1_555 E N1 GYS 61 E GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.285 ? covale ? covale11 E C3 GYS 61 E GYS 62 1_555 E N ASN 62 E ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.29 ? covale ? covale12 F C PHE 60 F PHE 61 1_555 F N1 GYS 61 F GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.291 ? covale ? covale13 F C3 GYS 61 F GYS 62 1_555 F N ASN 62 F ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.273 ? covale ? covale14 G C PHE 60 G PHE 61 1_555 G N1 GYS 61 G GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.287 ? covale ? covale15 G C3 GYS 61 G GYS 62 1_555 G N ASN 62 G ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.281 ? covale ? covale16 H C PHE 60 H PHE 61 1_555 H N1 GYS 61 H GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.272 ? covale ? covale17 H C3 GYS 61 H GYS 62 1_555 H N ASN 62 H ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.305 ? covale ? covale18 I C PHE 60 I PHE 61 1_555 I N1 GYS 61 I GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.273 ? covale ? covale19 I C3 GYS 61 I GYS 62 1_555 I N ASN 62 I ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.278 ? covale ? covale20 J C PHE 60 J PHE 61 1_555 J N1 GYS 61 J GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.264 ? covale ? covale21 J C3 GYS 61 J GYS 62 1_555 J N ASN 62 J ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.272 ? covale ? covale22 K C PHE 60 K PHE 61 1_555 K N1 GYS 61 K GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.29 ? covale ? covale23 K C3 GYS 61 K GYS 62 1_555 K N ASN 62 K ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.279 ? covale ? covale24 L C PHE 60 L PHE 61 1_555 L N1 GYS 61 L GYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.268 ? covale ? covale25 L C3 GYS 61 L GYS 62 1_555 L N ASN 62 L ASN 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.283 ? metalc ? metalc1 A NE2 HIS 197 A HIS 200 1_555 N CU CU . A CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc2 A NE2 HIS 207 A HIS 210 1_555 M CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc3 A NE2 HIS 209 A HIS 212 1_555 M CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc4 B NE2 HIS 197 B HIS 200 1_555 P CU CU . B CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc5 C NE2 HIS 197 C HIS 200 1_555 R CU CU . C CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc6 C NE2 HIS 207 C HIS 210 1_555 Q CU CU . C CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc7 C NE2 HIS 209 C HIS 212 1_555 Q CU CU . C CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc8 Q CU CU . C CU 301 1_555 MA O HOH . C HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc9 D NE2 HIS 197 D HIS 200 1_555 T CU CU . D CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? metalc ? metalc10 D NE2 HIS 207 D HIS 210 1_555 S CU CU . D CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc11 D NE2 HIS 209 D HIS 212 1_555 S CU CU . D CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc12 E NE2 HIS 197 E HIS 200 1_555 V CU CU . E CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc13 E NE2 HIS 207 E HIS 210 1_555 U CU CU . E CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc14 E NE2 HIS 209 E HIS 212 1_555 U CU CU . E CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc15 U CU CU . E CU 301 1_555 OA O HOH . E HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc16 F NE2 HIS 197 F HIS 200 1_555 X CU CU . F CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc17 F NE2 HIS 207 F HIS 210 1_555 W CU CU . F CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc18 F NE2 HIS 209 F HIS 212 1_555 W CU CU . F CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc19 G NE2 HIS 197 G HIS 200 1_555 Z CU CU . G CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc20 G NE2 HIS 207 G HIS 210 1_555 Y CU CU . G CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc21 H NE2 HIS 197 H HIS 200 1_555 BA CU CU . H CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc22 H NE2 HIS 207 H HIS 210 1_555 AA CU CU . H CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc23 H NE2 HIS 209 H HIS 212 1_555 AA CU CU . H CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc24 AA CU CU . H CU 301 1_555 RA O HOH . H HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc25 I NE2 HIS 197 I HIS 200 1_555 DA CU CU . I CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc26 I NE2 HIS 207 I HIS 210 1_555 CA CU CU . I CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc27 J NE2 HIS 197 J HIS 200 1_555 FA CU CU . J CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc28 J NE2 HIS 209 J HIS 212 1_555 EA CU CU . J CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? metalc ? metalc29 K NE2 HIS 197 K HIS 200 1_555 HA CU CU . K CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc30 K NE2 HIS 207 K HIS 210 1_555 GA CU CU . K CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc31 L NE2 HIS 197 L HIS 200 1_555 JA CU CU . L CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? metalc ? metalc32 L NE2 HIS 207 L HIS 210 1_555 IA CU CU . L CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc33 L NE2 HIS 209 L HIS 212 1_555 IA CU CU . L CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5HZT _atom_sites.fract_transf_matrix[1][1] 0.013837 _atom_sites.fract_transf_matrix[1][2] 0.000996 _atom_sites.fract_transf_matrix[1][3] 0.005585 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009462 _atom_sites.fract_transf_matrix[2][3] 0.005212 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011092 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 CU A 1 301 1 CU CU . N 2 CU A 1 302 13 CU CU . O 2 CU B 1 301 2 CU CU . P 2 CU B 1 302 24 CU CU . Q 2 CU C 1 301 3 CU CU . R 2 CU C 1 302 14 CU CU . S 2 CU D 1 301 4 CU CU . T 2 CU D 1 302 15 CU CU . U 2 CU E 1 301 5 CU CU . V 2 CU E 1 302 16 CU CU . W 2 CU F 1 301 6 CU CU . X 2 CU F 1 302 17 CU CU . Y 2 CU G 1 301 7 CU CU . Z 2 CU G 1 302 18 CU CU . AA 2 CU H 1 301 8 CU CU . BA 2 CU H 1 302 19 CU CU . CA 2 CU I 1 301 9 CU CU . DA 2 CU I 1 302 20 CU CU . EA 2 CU J 1 301 10 CU CU . FA 2 CU J 1 302 21 CU CU . GA 2 CU K 1 301 12 CU CU . HA 2 CU K 1 302 22 CU CU . IA 2 CU L 1 301 11 CU CU . JA 2 CU L 1 302 23 CU CU . KA 3 HOH A 1 401 26 HOH HOH . KA 3 HOH A 2 402 13 HOH HOH . KA 3 HOH A 3 403 55 HOH HOH . KA 3 HOH A 4 404 22 HOH HOH . KA 3 HOH A 5 405 35 HOH HOH . KA 3 HOH A 6 406 60 HOH HOH . KA 3 HOH A 7 407 12 HOH HOH . KA 3 HOH A 8 408 59 HOH HOH . KA 3 HOH A 9 409 61 HOH HOH . KA 3 HOH A 10 410 56 HOH HOH . KA 3 HOH A 11 411 58 HOH HOH . KA 3 HOH A 12 412 57 HOH HOH . LA 3 HOH B 1 401 24 HOH HOH . LA 3 HOH B 2 402 8 HOH HOH . LA 3 HOH B 3 403 25 HOH HOH . MA 3 HOH C 1 401 27 HOH HOH . MA 3 HOH C 2 402 10 HOH HOH . MA 3 HOH C 3 403 11 HOH HOH . NA 3 HOH D 1 401 28 HOH HOH . NA 3 HOH D 2 402 14 HOH HOH . NA 3 HOH D 3 403 1 HOH HOH . OA 3 HOH E 1 401 9 HOH HOH . OA 3 HOH E 2 402 46 HOH HOH . OA 3 HOH E 3 403 47 HOH HOH . OA 3 HOH E 4 404 15 HOH HOH . OA 3 HOH E 5 405 49 HOH HOH . OA 3 HOH E 6 406 45 HOH HOH . PA 3 HOH F 1 401 29 HOH HOH . PA 3 HOH F 2 402 2 HOH HOH . QA 3 HOH G 1 401 30 HOH HOH . QA 3 HOH G 2 402 16 HOH HOH . QA 3 HOH G 3 403 17 HOH HOH . RA 3 HOH H 1 401 7 HOH HOH . RA 3 HOH H 2 402 18 HOH HOH . RA 3 HOH H 3 403 3 HOH HOH . RA 3 HOH H 4 404 52 HOH HOH . RA 3 HOH H 5 405 53 HOH HOH . RA 3 HOH H 6 406 54 HOH HOH . RA 3 HOH H 7 407 19 HOH HOH . SA 3 HOH I 1 401 50 HOH HOH . SA 3 HOH I 2 402 31 HOH HOH . SA 3 HOH I 3 403 20 HOH HOH . SA 3 HOH I 4 404 4 HOH HOH . SA 3 HOH I 5 405 48 HOH HOH . TA 3 HOH J 1 401 32 HOH HOH . TA 3 HOH J 2 402 21 HOH HOH . TA 3 HOH J 3 403 5 HOH HOH . UA 3 HOH K 1 401 33 HOH HOH . UA 3 HOH K 2 402 44 HOH HOH . UA 3 HOH K 3 403 37 HOH HOH . UA 3 HOH K 4 404 51 HOH HOH . UA 3 HOH K 5 405 40 HOH HOH . UA 3 HOH K 6 406 43 HOH HOH . UA 3 HOH K 7 407 41 HOH HOH . UA 3 HOH K 8 408 42 HOH HOH . UA 3 HOH K 9 409 62 HOH HOH . UA 3 HOH K 10 410 63 HOH HOH . VA 3 HOH L 1 401 34 HOH HOH . VA 3 HOH L 2 402 6 HOH HOH . VA 3 HOH L 3 403 23 HOH HOH . VA 3 HOH L 4 404 36 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id P _atom_site.label_entity_id 2 _atom_site.Cartn_x -13.883 _atom_site.Cartn_y 39.761 _atom_site.Cartn_z 14.838 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 108.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 302 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #