data_5I0Y # _model_server_result.job_id HRQ0lm4v8NuoeoTF6lgGcA _model_server_result.datetime_utc '2024-11-04 20:18:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i0y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 5I0Y # _exptl.entry_id 5I0Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.52 _cell.angle_gamma 90 _cell.entry_id 5I0Y _cell.length_a 83.16 _cell.length_b 36.54 _cell.length_c 101 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I0Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 44 A HIS 44 1_555 C CU CU . A CU 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.196 ? metalc ? metalc2 A NE2 HIS 44 A HIS 44 1_555 C CU CU . A CU 201 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.101 ? metalc ? metalc3 A SD MET 90 A MET 90 1_555 C CU CU . A CU 201 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.531 ? metalc ? metalc4 A NE2 HIS 97 A HIS 97 1_555 C CU CU . A CU 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.29 ? metalc ? metalc5 A NE2 HIS 97 A HIS 97 1_555 C CU CU . A CU 201 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.838 ? metalc ? metalc6 A NE2 HIS 127 A HIS 127 1_555 D CU CU . A CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc7 C CU CU . A CU 201 1_555 B NE2 HIS 127 B HIS 127 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc8 C CU CU . A CU 201 1_555 B NE2 HIS 127 B HIS 127 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc9 D CU CU . A CU 202 1_555 B NE2 HIS 44 B HIS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc10 D CU CU . A CU 202 1_555 B SD MET 90 B MET 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc11 D CU CU . A CU 202 1_555 B NE2 HIS 97 B HIS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5I0Y _atom_sites.fract_transf_matrix[1][1] 0.012025 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003567 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027367 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010327 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CU A 1 201 201 CU CU . D 2 CU A 1 202 201 CU CU . E 3 HOH A 1 301 363 HOH HOH . E 3 HOH A 2 302 330 HOH HOH . E 3 HOH A 3 303 304 HOH HOH . E 3 HOH A 4 304 339 HOH HOH . E 3 HOH A 5 305 349 HOH HOH . E 3 HOH A 6 306 343 HOH HOH . E 3 HOH A 7 307 370 HOH HOH . E 3 HOH A 8 308 324 HOH HOH . E 3 HOH A 9 309 316 HOH HOH . E 3 HOH A 10 310 412 HOH HOH . E 3 HOH A 11 311 385 HOH HOH . E 3 HOH A 12 312 303 HOH HOH . E 3 HOH A 13 313 436 HOH HOH . E 3 HOH A 14 314 341 HOH HOH . E 3 HOH A 15 315 388 HOH HOH . E 3 HOH A 16 316 400 HOH HOH . E 3 HOH A 17 317 386 HOH HOH . E 3 HOH A 18 318 301 HOH HOH . E 3 HOH A 19 319 430 HOH HOH . E 3 HOH A 20 320 338 HOH HOH . E 3 HOH A 21 321 408 HOH HOH . E 3 HOH A 22 322 317 HOH HOH . E 3 HOH A 23 323 394 HOH HOH . E 3 HOH A 24 324 418 HOH HOH . E 3 HOH A 25 325 358 HOH HOH . E 3 HOH A 26 326 364 HOH HOH . E 3 HOH A 27 327 306 HOH HOH . E 3 HOH A 28 328 395 HOH HOH . E 3 HOH A 29 329 398 HOH HOH . E 3 HOH A 30 330 408 HOH HOH . E 3 HOH A 31 331 333 HOH HOH . E 3 HOH A 32 332 362 HOH HOH . E 3 HOH A 33 333 377 HOH HOH . E 3 HOH A 34 334 381 HOH HOH . E 3 HOH A 35 335 366 HOH HOH . E 3 HOH A 36 336 373 HOH HOH . E 3 HOH A 37 337 337 HOH HOH . E 3 HOH A 38 338 376 HOH HOH . E 3 HOH A 39 339 355 HOH HOH . E 3 HOH A 40 340 307 HOH HOH . E 3 HOH A 41 341 313 HOH HOH . E 3 HOH A 42 342 405 HOH HOH . E 3 HOH A 43 343 420 HOH HOH . E 3 HOH A 44 344 359 HOH HOH . E 3 HOH A 45 345 326 HOH HOH . E 3 HOH A 46 346 350 HOH HOH . E 3 HOH A 47 347 305 HOH HOH . E 3 HOH A 48 348 361 HOH HOH . E 3 HOH A 49 349 428 HOH HOH . E 3 HOH A 50 350 346 HOH HOH . E 3 HOH A 51 351 389 HOH HOH . E 3 HOH A 52 352 375 HOH HOH . E 3 HOH A 53 353 315 HOH HOH . E 3 HOH A 54 354 384 HOH HOH . E 3 HOH A 55 355 329 HOH HOH . E 3 HOH A 56 356 401 HOH HOH . E 3 HOH A 57 357 380 HOH HOH . E 3 HOH A 58 358 402 HOH HOH . E 3 HOH A 59 359 423 HOH HOH . E 3 HOH A 60 360 314 HOH HOH . E 3 HOH A 61 361 328 HOH HOH . E 3 HOH A 62 362 312 HOH HOH . E 3 HOH A 63 363 419 HOH HOH . E 3 HOH A 64 364 353 HOH HOH . E 3 HOH A 65 365 382 HOH HOH . E 3 HOH A 66 366 429 HOH HOH . E 3 HOH A 67 367 369 HOH HOH . E 3 HOH A 68 368 318 HOH HOH . E 3 HOH A 69 369 319 HOH HOH . E 3 HOH A 70 370 302 HOH HOH . E 3 HOH A 71 371 334 HOH HOH . E 3 HOH A 72 372 387 HOH HOH . E 3 HOH A 73 373 403 HOH HOH . E 3 HOH A 74 374 391 HOH HOH . E 3 HOH A 75 375 335 HOH HOH . E 3 HOH A 76 376 325 HOH HOH . E 3 HOH A 77 377 342 HOH HOH . E 3 HOH A 78 378 425 HOH HOH . E 3 HOH A 79 379 309 HOH HOH . E 3 HOH A 80 380 367 HOH HOH . E 3 HOH A 81 381 372 HOH HOH . E 3 HOH A 82 382 322 HOH HOH . E 3 HOH A 83 383 332 HOH HOH . E 3 HOH A 84 384 390 HOH HOH . E 3 HOH A 85 385 321 HOH HOH . E 3 HOH A 86 386 378 HOH HOH . E 3 HOH A 87 387 407 HOH HOH . E 3 HOH A 88 388 311 HOH HOH . E 3 HOH A 89 389 308 HOH HOH . E 3 HOH A 90 390 360 HOH HOH . E 3 HOH A 91 391 356 HOH HOH . E 3 HOH A 92 392 354 HOH HOH . E 3 HOH A 93 393 415 HOH HOH . E 3 HOH A 94 394 417 HOH HOH . E 3 HOH A 95 395 435 HOH HOH . E 3 HOH A 96 396 404 HOH HOH . E 3 HOH A 97 397 371 HOH HOH . E 3 HOH A 98 398 426 HOH HOH . E 3 HOH A 99 399 392 HOH HOH . E 3 HOH A 100 400 348 HOH HOH . E 3 HOH A 101 401 411 HOH HOH . E 3 HOH A 102 402 424 HOH HOH . E 3 HOH A 103 403 357 HOH HOH . E 3 HOH A 104 404 327 HOH HOH . E 3 HOH A 105 405 351 HOH HOH . E 3 HOH A 106 406 374 HOH HOH . E 3 HOH A 107 407 340 HOH HOH . E 3 HOH A 108 408 310 HOH HOH . E 3 HOH A 109 409 320 HOH HOH . E 3 HOH A 110 410 345 HOH HOH . E 3 HOH A 111 411 336 HOH HOH . E 3 HOH A 112 412 421 HOH HOH . E 3 HOH A 113 413 379 HOH HOH . E 3 HOH A 114 414 368 HOH HOH . E 3 HOH A 115 415 323 HOH HOH . E 3 HOH A 116 416 406 HOH HOH . E 3 HOH A 117 417 365 HOH HOH . E 3 HOH A 118 418 344 HOH HOH . E 3 HOH A 119 419 433 HOH HOH . E 3 HOH A 120 420 409 HOH HOH . E 3 HOH A 121 421 397 HOH HOH . E 3 HOH A 122 422 352 HOH HOH . E 3 HOH A 123 423 347 HOH HOH . E 3 HOH A 124 424 396 HOH HOH . E 3 HOH A 125 425 399 HOH HOH . E 3 HOH A 126 426 393 HOH HOH . E 3 HOH A 127 427 414 HOH HOH . E 3 HOH A 128 428 335 HOH HOH . E 3 HOH A 129 429 349 HOH HOH . E 3 HOH A 130 430 432 HOH HOH . E 3 HOH A 131 431 331 HOH HOH . E 3 HOH A 132 432 427 HOH HOH . E 3 HOH A 133 433 434 HOH HOH . E 3 HOH A 134 434 410 HOH HOH . E 3 HOH A 135 435 383 HOH HOH . E 3 HOH A 136 436 422 HOH HOH . E 3 HOH A 137 437 431 HOH HOH . E 3 HOH A 138 438 416 HOH HOH . E 3 HOH A 139 439 413 HOH HOH . F 3 HOH B 1 301 388 HOH HOH . F 3 HOH B 2 302 387 HOH HOH . F 3 HOH B 3 303 339 HOH HOH . F 3 HOH B 4 304 378 HOH HOH . F 3 HOH B 5 305 320 HOH HOH . F 3 HOH B 6 306 321 HOH HOH . F 3 HOH B 7 307 381 HOH HOH . F 3 HOH B 8 308 359 HOH HOH . F 3 HOH B 9 309 412 HOH HOH . F 3 HOH B 10 310 366 HOH HOH . F 3 HOH B 11 311 328 HOH HOH . F 3 HOH B 12 312 302 HOH HOH . F 3 HOH B 13 313 350 HOH HOH . F 3 HOH B 14 314 304 HOH HOH . F 3 HOH B 15 315 353 HOH HOH . F 3 HOH B 16 316 336 HOH HOH . F 3 HOH B 17 317 434 HOH HOH . F 3 HOH B 18 318 301 HOH HOH . F 3 HOH B 19 319 358 HOH HOH . F 3 HOH B 20 320 398 HOH HOH . F 3 HOH B 21 321 376 HOH HOH . F 3 HOH B 22 322 402 HOH HOH . F 3 HOH B 23 323 373 HOH HOH . F 3 HOH B 24 324 322 HOH HOH . F 3 HOH B 25 325 357 HOH HOH . F 3 HOH B 26 326 337 HOH HOH . F 3 HOH B 27 327 325 HOH HOH . F 3 HOH B 28 328 363 HOH HOH . F 3 HOH B 29 329 399 HOH HOH . F 3 HOH B 30 330 323 HOH HOH . F 3 HOH B 31 331 386 HOH HOH . F 3 HOH B 32 332 312 HOH HOH . F 3 HOH B 33 333 409 HOH HOH . F 3 HOH B 34 334 314 HOH HOH . F 3 HOH B 35 335 365 HOH HOH . F 3 HOH B 36 336 316 HOH HOH . F 3 HOH B 37 337 347 HOH HOH . F 3 HOH B 38 338 364 HOH HOH . F 3 HOH B 39 339 397 HOH HOH . F 3 HOH B 40 340 332 HOH HOH . F 3 HOH B 41 341 394 HOH HOH . F 3 HOH B 42 342 390 HOH HOH . F 3 HOH B 43 343 415 HOH HOH . F 3 HOH B 44 344 369 HOH HOH . F 3 HOH B 45 345 307 HOH HOH . F 3 HOH B 46 346 361 HOH HOH . F 3 HOH B 47 347 340 HOH HOH . F 3 HOH B 48 348 317 HOH HOH . F 3 HOH B 49 349 370 HOH HOH . F 3 HOH B 50 350 305 HOH HOH . F 3 HOH B 51 351 428 HOH HOH . F 3 HOH B 52 352 421 HOH HOH . F 3 HOH B 53 353 420 HOH HOH . F 3 HOH B 54 354 429 HOH HOH . F 3 HOH B 55 355 419 HOH HOH . F 3 HOH B 56 356 404 HOH HOH . F 3 HOH B 57 357 341 HOH HOH . F 3 HOH B 58 358 308 HOH HOH . F 3 HOH B 59 359 313 HOH HOH . F 3 HOH B 60 360 382 HOH HOH . F 3 HOH B 61 361 303 HOH HOH . F 3 HOH B 62 362 407 HOH HOH . F 3 HOH B 63 363 375 HOH HOH . F 3 HOH B 64 364 345 HOH HOH . F 3 HOH B 65 365 385 HOH HOH . F 3 HOH B 66 366 319 HOH HOH . F 3 HOH B 67 367 391 HOH HOH . F 3 HOH B 68 368 360 HOH HOH . F 3 HOH B 69 369 371 HOH HOH . F 3 HOH B 70 370 431 HOH HOH . F 3 HOH B 71 371 393 HOH HOH . F 3 HOH B 72 372 383 HOH HOH . F 3 HOH B 73 373 392 HOH HOH . F 3 HOH B 74 374 384 HOH HOH . F 3 HOH B 75 375 372 HOH HOH . F 3 HOH B 76 376 413 HOH HOH . F 3 HOH B 77 377 436 HOH HOH . F 3 HOH B 78 378 346 HOH HOH . F 3 HOH B 79 379 315 HOH HOH . F 3 HOH B 80 380 309 HOH HOH . F 3 HOH B 81 381 403 HOH HOH . F 3 HOH B 82 382 367 HOH HOH . F 3 HOH B 83 383 425 HOH HOH . F 3 HOH B 84 384 400 HOH HOH . F 3 HOH B 85 385 351 HOH HOH . F 3 HOH B 86 386 330 HOH HOH . F 3 HOH B 87 387 379 HOH HOH . F 3 HOH B 88 388 354 HOH HOH . F 3 HOH B 89 389 324 HOH HOH . F 3 HOH B 90 390 424 HOH HOH . F 3 HOH B 91 391 338 HOH HOH . F 3 HOH B 92 392 430 HOH HOH . F 3 HOH B 93 393 380 HOH HOH . F 3 HOH B 94 394 374 HOH HOH . F 3 HOH B 95 395 333 HOH HOH . F 3 HOH B 96 396 318 HOH HOH . F 3 HOH B 97 397 342 HOH HOH . F 3 HOH B 98 398 432 HOH HOH . F 3 HOH B 99 399 389 HOH HOH . F 3 HOH B 100 400 331 HOH HOH . F 3 HOH B 101 401 344 HOH HOH . F 3 HOH B 102 402 311 HOH HOH . F 3 HOH B 103 403 426 HOH HOH . F 3 HOH B 104 404 355 HOH HOH . F 3 HOH B 105 405 405 HOH HOH . F 3 HOH B 106 406 306 HOH HOH . F 3 HOH B 107 407 423 HOH HOH . F 3 HOH B 108 408 410 HOH HOH . F 3 HOH B 109 409 343 HOH HOH . F 3 HOH B 110 410 334 HOH HOH . F 3 HOH B 111 411 377 HOH HOH . F 3 HOH B 112 412 356 HOH HOH . F 3 HOH B 113 413 329 HOH HOH . F 3 HOH B 114 414 422 HOH HOH . F 3 HOH B 115 415 406 HOH HOH . F 3 HOH B 116 416 411 HOH HOH . F 3 HOH B 117 417 433 HOH HOH . F 3 HOH B 118 418 352 HOH HOH . F 3 HOH B 119 419 362 HOH HOH . F 3 HOH B 120 420 310 HOH HOH . F 3 HOH B 121 421 396 HOH HOH . F 3 HOH B 122 422 401 HOH HOH . F 3 HOH B 123 423 417 HOH HOH . F 3 HOH B 124 424 427 HOH HOH . F 3 HOH B 125 425 395 HOH HOH . F 3 HOH B 126 426 437 HOH HOH . F 3 HOH B 127 427 326 HOH HOH . F 3 HOH B 128 428 368 HOH HOH . F 3 HOH B 129 429 416 HOH HOH . F 3 HOH B 130 430 435 HOH HOH . F 3 HOH B 131 431 438 HOH HOH . F 3 HOH B 132 432 327 HOH HOH . F 3 HOH B 133 433 414 HOH HOH . F 3 HOH B 134 434 348 HOH HOH . F 3 HOH B 135 435 418 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CU CU CU . A . C 2 24.35 -2.851 18.384 0.5 8.05 ? CU CU 201 A 1 HETATM 2 CU CU CU . B . C 2 24.74 -2.255 18.48 0.5 8.16 ? CU CU 201 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 2 #