data_5I29 # _model_server_result.job_id oJMLrofn2js8quNUdH5tYw _model_server_result.datetime_utc '2024-11-16 20:50:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i29 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1702}' # _entry.id 5I29 # _exptl.entry_id 5I29 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5I29 _cell.length_a 47.397 _cell.length_b 59.471 _cell.length_c 59.866 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I29 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 138 A GLU 1632 1_555 C CA CA . A CA 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc2 A O ASP 141 A ASP 1635 1_555 C CA CA . A CA 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc3 A O MET 143 A MET 1637 1_555 C CA CA . A CA 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc4 C CA CA . A CA 1702 1_555 D O HOH . A HOH 1920 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc5 C CA CA . A CA 1702 1_555 D O HOH . A HOH 1948 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc6 C CA CA . A CA 1702 1_555 D O HOH . A HOH 1968 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5I29 _atom_sites.fract_transf_matrix[1][1] 0.021098 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016815 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016704 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 67B A 1 1701 1 67B 513 . C 3 CA A 1 1702 1 CA CA . D 4 HOH A 1 1801 116 HOH HOH . D 4 HOH A 2 1802 106 HOH HOH . D 4 HOH A 3 1803 279 HOH HOH . D 4 HOH A 4 1804 1 HOH HOH . D 4 HOH A 5 1805 209 HOH HOH . D 4 HOH A 6 1806 158 HOH HOH . D 4 HOH A 7 1807 254 HOH HOH . D 4 HOH A 8 1808 262 HOH HOH . D 4 HOH A 9 1809 261 HOH HOH . D 4 HOH A 10 1810 234 HOH HOH . D 4 HOH A 11 1811 228 HOH HOH . D 4 HOH A 12 1812 218 HOH HOH . D 4 HOH A 13 1813 241 HOH HOH . D 4 HOH A 14 1814 242 HOH HOH . D 4 HOH A 15 1815 76 HOH HOH . D 4 HOH A 16 1816 211 HOH HOH . D 4 HOH A 17 1817 203 HOH HOH . D 4 HOH A 18 1818 87 HOH HOH . D 4 HOH A 19 1819 223 HOH HOH . D 4 HOH A 20 1820 27 HOH HOH . D 4 HOH A 21 1821 197 HOH HOH . D 4 HOH A 22 1822 173 HOH HOH . D 4 HOH A 23 1823 83 HOH HOH . D 4 HOH A 24 1824 115 HOH HOH . D 4 HOH A 25 1825 181 HOH HOH . D 4 HOH A 26 1826 156 HOH HOH . D 4 HOH A 27 1827 31 HOH HOH . D 4 HOH A 28 1828 8 HOH HOH . D 4 HOH A 29 1829 9 HOH HOH . D 4 HOH A 30 1830 213 HOH HOH . D 4 HOH A 31 1831 140 HOH HOH . D 4 HOH A 32 1832 2 HOH HOH . D 4 HOH A 33 1833 32 HOH HOH . D 4 HOH A 34 1834 135 HOH HOH . D 4 HOH A 35 1835 124 HOH HOH . D 4 HOH A 36 1836 58 HOH HOH . D 4 HOH A 37 1837 98 HOH HOH . D 4 HOH A 38 1838 86 HOH HOH . D 4 HOH A 39 1839 110 HOH HOH . D 4 HOH A 40 1840 127 HOH HOH . D 4 HOH A 41 1841 73 HOH HOH . D 4 HOH A 42 1842 113 HOH HOH . D 4 HOH A 43 1843 187 HOH HOH . D 4 HOH A 44 1844 63 HOH HOH . D 4 HOH A 45 1845 38 HOH HOH . D 4 HOH A 46 1846 16 HOH HOH . D 4 HOH A 47 1847 179 HOH HOH . D 4 HOH A 48 1848 202 HOH HOH . D 4 HOH A 49 1849 15 HOH HOH . D 4 HOH A 50 1850 74 HOH HOH . D 4 HOH A 51 1851 17 HOH HOH . D 4 HOH A 52 1852 46 HOH HOH . D 4 HOH A 53 1853 25 HOH HOH . D 4 HOH A 54 1854 281 HOH HOH . D 4 HOH A 55 1855 256 HOH HOH . D 4 HOH A 56 1856 57 HOH HOH . D 4 HOH A 57 1857 75 HOH HOH . D 4 HOH A 58 1858 182 HOH HOH . D 4 HOH A 59 1859 129 HOH HOH . D 4 HOH A 60 1860 13 HOH HOH . D 4 HOH A 61 1861 37 HOH HOH . D 4 HOH A 62 1862 269 HOH HOH . D 4 HOH A 63 1863 232 HOH HOH . D 4 HOH A 64 1864 224 HOH HOH . D 4 HOH A 65 1865 268 HOH HOH . D 4 HOH A 66 1866 99 HOH HOH . D 4 HOH A 67 1867 138 HOH HOH . D 4 HOH A 68 1868 97 HOH HOH . D 4 HOH A 69 1869 79 HOH HOH . D 4 HOH A 70 1870 91 HOH HOH . D 4 HOH A 71 1871 3 HOH HOH . D 4 HOH A 72 1872 28 HOH HOH . D 4 HOH A 73 1873 121 HOH HOH . D 4 HOH A 74 1874 153 HOH HOH . D 4 HOH A 75 1875 170 HOH HOH . D 4 HOH A 76 1876 227 HOH HOH . D 4 HOH A 77 1877 14 HOH HOH . D 4 HOH A 78 1878 39 HOH HOH . D 4 HOH A 79 1879 20 HOH HOH . D 4 HOH A 80 1880 40 HOH HOH . D 4 HOH A 81 1881 60 HOH HOH . D 4 HOH A 82 1882 6 HOH HOH . D 4 HOH A 83 1883 23 HOH HOH . D 4 HOH A 84 1884 260 HOH HOH . D 4 HOH A 85 1885 191 HOH HOH . D 4 HOH A 86 1886 160 HOH HOH . D 4 HOH A 87 1887 53 HOH HOH . D 4 HOH A 88 1888 103 HOH HOH . D 4 HOH A 89 1889 51 HOH HOH . D 4 HOH A 90 1890 61 HOH HOH . D 4 HOH A 91 1891 47 HOH HOH . D 4 HOH A 92 1892 188 HOH HOH . D 4 HOH A 93 1893 69 HOH HOH . D 4 HOH A 94 1894 104 HOH HOH . D 4 HOH A 95 1895 193 HOH HOH . D 4 HOH A 96 1896 62 HOH HOH . D 4 HOH A 97 1897 263 HOH HOH . D 4 HOH A 98 1898 164 HOH HOH . D 4 HOH A 99 1899 10 HOH HOH . D 4 HOH A 100 1900 18 HOH HOH . D 4 HOH A 101 1901 101 HOH HOH . D 4 HOH A 102 1902 70 HOH HOH . D 4 HOH A 103 1903 19 HOH HOH . D 4 HOH A 104 1904 151 HOH HOH . D 4 HOH A 105 1905 147 HOH HOH . D 4 HOH A 106 1906 198 HOH HOH . D 4 HOH A 107 1907 68 HOH HOH . D 4 HOH A 108 1908 196 HOH HOH . D 4 HOH A 109 1909 162 HOH HOH . D 4 HOH A 110 1910 89 HOH HOH . D 4 HOH A 111 1911 200 HOH HOH . D 4 HOH A 112 1912 146 HOH HOH . D 4 HOH A 113 1913 49 HOH HOH . D 4 HOH A 114 1914 163 HOH HOH . D 4 HOH A 115 1915 56 HOH HOH . D 4 HOH A 116 1916 122 HOH HOH . D 4 HOH A 117 1917 107 HOH HOH . D 4 HOH A 118 1918 134 HOH HOH . D 4 HOH A 119 1919 7 HOH HOH . D 4 HOH A 120 1920 280 HOH HOH . D 4 HOH A 121 1921 128 HOH HOH . D 4 HOH A 122 1922 195 HOH HOH . D 4 HOH A 123 1923 29 HOH HOH . D 4 HOH A 124 1924 114 HOH HOH . D 4 HOH A 125 1925 175 HOH HOH . D 4 HOH A 126 1926 77 HOH HOH . D 4 HOH A 127 1927 210 HOH HOH . D 4 HOH A 128 1928 50 HOH HOH . D 4 HOH A 129 1929 109 HOH HOH . D 4 HOH A 130 1930 81 HOH HOH . D 4 HOH A 131 1931 144 HOH HOH . D 4 HOH A 132 1932 24 HOH HOH . D 4 HOH A 133 1933 267 HOH HOH . D 4 HOH A 134 1934 96 HOH HOH . D 4 HOH A 135 1935 102 HOH HOH . D 4 HOH A 136 1936 64 HOH HOH . D 4 HOH A 137 1937 11 HOH HOH . D 4 HOH A 138 1938 118 HOH HOH . D 4 HOH A 139 1939 245 HOH HOH . D 4 HOH A 140 1940 33 HOH HOH . D 4 HOH A 141 1941 247 HOH HOH . D 4 HOH A 142 1942 42 HOH HOH . D 4 HOH A 143 1943 71 HOH HOH . D 4 HOH A 144 1944 180 HOH HOH . D 4 HOH A 145 1945 215 HOH HOH . D 4 HOH A 146 1946 4 HOH HOH . D 4 HOH A 147 1947 52 HOH HOH . D 4 HOH A 148 1948 273 HOH HOH . D 4 HOH A 149 1949 126 HOH HOH . D 4 HOH A 150 1950 82 HOH HOH . D 4 HOH A 151 1951 130 HOH HOH . D 4 HOH A 152 1952 12 HOH HOH . D 4 HOH A 153 1953 176 HOH HOH . D 4 HOH A 154 1954 259 HOH HOH . D 4 HOH A 155 1955 59 HOH HOH . D 4 HOH A 156 1956 172 HOH HOH . D 4 HOH A 157 1957 85 HOH HOH . D 4 HOH A 158 1958 132 HOH HOH . D 4 HOH A 159 1959 41 HOH HOH . D 4 HOH A 160 1960 157 HOH HOH . D 4 HOH A 161 1961 34 HOH HOH . D 4 HOH A 162 1962 108 HOH HOH . D 4 HOH A 163 1963 233 HOH HOH . D 4 HOH A 164 1964 125 HOH HOH . D 4 HOH A 165 1965 36 HOH HOH . D 4 HOH A 166 1966 214 HOH HOH . D 4 HOH A 167 1967 192 HOH HOH . D 4 HOH A 168 1968 274 HOH HOH . D 4 HOH A 169 1969 221 HOH HOH . D 4 HOH A 170 1970 117 HOH HOH . D 4 HOH A 171 1971 168 HOH HOH . D 4 HOH A 172 1972 205 HOH HOH . D 4 HOH A 173 1973 177 HOH HOH . D 4 HOH A 174 1974 26 HOH HOH . D 4 HOH A 175 1975 243 HOH HOH . D 4 HOH A 176 1976 246 HOH HOH . D 4 HOH A 177 1977 131 HOH HOH . D 4 HOH A 178 1978 207 HOH HOH . D 4 HOH A 179 1979 133 HOH HOH . D 4 HOH A 180 1980 148 HOH HOH . D 4 HOH A 181 1981 149 HOH HOH . D 4 HOH A 182 1982 154 HOH HOH . D 4 HOH A 183 1983 145 HOH HOH . D 4 HOH A 184 1984 252 HOH HOH . D 4 HOH A 185 1985 206 HOH HOH . D 4 HOH A 186 1986 231 HOH HOH . D 4 HOH A 187 1987 169 HOH HOH . D 4 HOH A 188 1988 248 HOH HOH . D 4 HOH A 189 1989 5 HOH HOH . D 4 HOH A 190 1990 216 HOH HOH . D 4 HOH A 191 1991 253 HOH HOH . D 4 HOH A 192 1992 171 HOH HOH . D 4 HOH A 193 1993 90 HOH HOH . D 4 HOH A 194 1994 80 HOH HOH . D 4 HOH A 195 1995 142 HOH HOH . D 4 HOH A 196 1996 100 HOH HOH . D 4 HOH A 197 1997 72 HOH HOH . D 4 HOH A 198 1998 183 HOH HOH . D 4 HOH A 199 1999 55 HOH HOH . D 4 HOH A 200 2000 54 HOH HOH . D 4 HOH A 201 2001 185 HOH HOH . D 4 HOH A 202 2002 43 HOH HOH . D 4 HOH A 203 2003 136 HOH HOH . D 4 HOH A 204 2004 257 HOH HOH . D 4 HOH A 205 2005 235 HOH HOH . D 4 HOH A 206 2006 22 HOH HOH . D 4 HOH A 207 2007 44 HOH HOH . D 4 HOH A 208 2008 189 HOH HOH . D 4 HOH A 209 2009 78 HOH HOH . D 4 HOH A 210 2010 238 HOH HOH . D 4 HOH A 211 2011 167 HOH HOH . D 4 HOH A 212 2012 178 HOH HOH . D 4 HOH A 213 2013 272 HOH HOH . D 4 HOH A 214 2014 88 HOH HOH . D 4 HOH A 215 2015 204 HOH HOH . D 4 HOH A 216 2016 264 HOH HOH . D 4 HOH A 217 2017 66 HOH HOH . D 4 HOH A 218 2018 155 HOH HOH . D 4 HOH A 219 2019 190 HOH HOH . D 4 HOH A 220 2020 220 HOH HOH . D 4 HOH A 221 2021 123 HOH HOH . D 4 HOH A 222 2022 226 HOH HOH . D 4 HOH A 223 2023 276 HOH HOH . D 4 HOH A 224 2024 84 HOH HOH . D 4 HOH A 225 2025 244 HOH HOH . D 4 HOH A 226 2026 93 HOH HOH . D 4 HOH A 227 2027 95 HOH HOH . D 4 HOH A 228 2028 105 HOH HOH . D 4 HOH A 229 2029 277 HOH HOH . D 4 HOH A 230 2030 139 HOH HOH . D 4 HOH A 231 2031 119 HOH HOH . D 4 HOH A 232 2032 120 HOH HOH . D 4 HOH A 233 2033 199 HOH HOH . D 4 HOH A 234 2034 35 HOH HOH . D 4 HOH A 235 2035 30 HOH HOH . D 4 HOH A 236 2036 201 HOH HOH . D 4 HOH A 237 2037 159 HOH HOH . D 4 HOH A 238 2038 222 HOH HOH . D 4 HOH A 239 2039 94 HOH HOH . D 4 HOH A 240 2040 251 HOH HOH . D 4 HOH A 241 2041 236 HOH HOH . D 4 HOH A 242 2042 137 HOH HOH . D 4 HOH A 243 2043 219 HOH HOH . D 4 HOH A 244 2044 141 HOH HOH . D 4 HOH A 245 2045 271 HOH HOH . D 4 HOH A 246 2046 48 HOH HOH . D 4 HOH A 247 2047 112 HOH HOH . D 4 HOH A 248 2048 230 HOH HOH . D 4 HOH A 249 2049 165 HOH HOH . D 4 HOH A 250 2050 143 HOH HOH . D 4 HOH A 251 2051 255 HOH HOH . D 4 HOH A 252 2052 152 HOH HOH . D 4 HOH A 253 2053 225 HOH HOH . D 4 HOH A 254 2054 111 HOH HOH . D 4 HOH A 255 2055 92 HOH HOH . D 4 HOH A 256 2056 21 HOH HOH . D 4 HOH A 257 2057 237 HOH HOH . D 4 HOH A 258 2058 65 HOH HOH . D 4 HOH A 259 2059 212 HOH HOH . D 4 HOH A 260 2060 275 HOH HOH . D 4 HOH A 261 2061 250 HOH HOH . D 4 HOH A 262 2062 194 HOH HOH . D 4 HOH A 263 2063 67 HOH HOH . D 4 HOH A 264 2064 208 HOH HOH . D 4 HOH A 265 2065 161 HOH HOH . D 4 HOH A 266 2066 184 HOH HOH . D 4 HOH A 267 2067 266 HOH HOH . D 4 HOH A 268 2068 166 HOH HOH . D 4 HOH A 269 2069 278 HOH HOH . D 4 HOH A 270 2070 186 HOH HOH . D 4 HOH A 271 2071 229 HOH HOH . D 4 HOH A 272 2072 258 HOH HOH . D 4 HOH A 273 2073 239 HOH HOH . D 4 HOH A 274 2074 174 HOH HOH . D 4 HOH A 275 2075 240 HOH HOH . D 4 HOH A 276 2076 150 HOH HOH . D 4 HOH A 277 2077 45 HOH HOH . D 4 HOH A 278 2078 249 HOH HOH . D 4 HOH A 279 2079 265 HOH HOH . D 4 HOH A 280 2080 217 HOH HOH . D 4 HOH A 281 2081 270 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -22.548 _atom_site.Cartn_y 0.672 _atom_site.Cartn_z 40.243 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.92 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1702 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #