data_5I2K
#
_model_server_result.job_id            XeDdNJcEPFSxRqZcRtctQQ 
_model_server_result.datetime_utc      '2024-11-08 04:12:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5i2k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    5I2K 
#
_exptl.entry_id    5I2K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              147.129 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'GLUTAMIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5I2K 
_cell.length_a            55.655 
_cell.length_b            89.329 
_cell.length_c            119.447 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5I2K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 31 A CYS 31 1_555 A SG CYS 57 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf2 A SG CYS 38 A CYS 38 1_555 A SG CYS 58 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 A SG CYS 228 A CYS 228 1_555 A SG CYS 283 A CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf4 B SG CYS 29 B CYS 29 1_555 B SG CYS 63 B CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf5 B SG CYS 45 B CYS 45 1_555 B SG CYS 64 B CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf6 B SG CYS 237 B CYS 237 1_555 B SG CYS 291 B CYS 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
#
_chem_comp.formula           'C5 H9 N O4' 
_chem_comp.formula_weight    147.129 
_chem_comp.id                GLU 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              'GLUTAMIC ACID' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA GLU sing 149 n n 
N H GLU sing 150 n n 
N H2 GLU sing 151 n n 
CA C GLU sing 152 n n 
CA CB GLU sing 153 n n 
CA HA GLU sing 154 n n 
C O GLU doub 155 n n 
C OXT GLU sing 156 n n 
CB CG GLU sing 157 n n 
CB HB2 GLU sing 158 n n 
CB HB3 GLU sing 159 n n 
CG CD GLU sing 160 n n 
CG HG2 GLU sing 161 n n 
CG HG3 GLU sing 162 n n 
CD OE1 GLU doub 163 n n 
CD OE2 GLU sing 164 n n 
OE2 HE2 GLU sing 165 n n 
OXT HXT GLU sing 166 n n 
#
_atom_sites.entry_id                     5I2K 
_atom_sites.fract_transf_matrix[1][1]    0.017968 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011195 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008372 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GLU A 1 301 1 GLU GLU . 
D 4 GLY B 1 301 1 GLY GLY . 
E 5 67H B 1 302 1 67H DRG . 
F 6 HOH A 1 401 11 HOH HOH . 
F 6 HOH A 2 402 3 HOH HOH . 
F 6 HOH A 3 403 31 HOH HOH . 
F 6 HOH A 4 404 7 HOH HOH . 
F 6 HOH A 5 405 21 HOH HOH . 
F 6 HOH A 6 406 12 HOH HOH . 
F 6 HOH A 7 407 5 HOH HOH . 
F 6 HOH A 8 408 33 HOH HOH . 
F 6 HOH A 9 409 23 HOH HOH . 
F 6 HOH A 10 410 47 HOH HOH . 
F 6 HOH A 11 411 24 HOH HOH . 
F 6 HOH A 12 412 50 HOH HOH . 
F 6 HOH A 13 413 51 HOH HOH . 
F 6 HOH A 14 414 14 HOH HOH . 
F 6 HOH A 15 415 32 HOH HOH . 
F 6 HOH A 16 416 9 HOH HOH . 
F 6 HOH A 17 417 46 HOH HOH . 
F 6 HOH A 18 418 1 HOH HOH . 
F 6 HOH A 19 419 52 HOH HOH . 
F 6 HOH A 20 420 45 HOH HOH . 
F 6 HOH A 21 421 18 HOH HOH . 
F 6 HOH A 22 422 19 HOH HOH . 
F 6 HOH A 23 423 49 HOH HOH . 
F 6 HOH A 24 424 13 HOH HOH . 
F 6 HOH A 25 425 53 HOH HOH . 
F 6 HOH A 26 426 17 HOH HOH . 
F 6 HOH A 27 427 38 HOH HOH . 
F 6 HOH A 28 428 35 HOH HOH . 
F 6 HOH A 29 429 26 HOH HOH . 
G 6 HOH B 1 401 6 HOH HOH . 
G 6 HOH B 2 402 16 HOH HOH . 
G 6 HOH B 3 403 10 HOH HOH . 
G 6 HOH B 4 404 20 HOH HOH . 
G 6 HOH B 5 405 44 HOH HOH . 
G 6 HOH B 6 406 8 HOH HOH . 
G 6 HOH B 7 407 4 HOH HOH . 
G 6 HOH B 8 408 30 HOH HOH . 
G 6 HOH B 9 409 34 HOH HOH . 
G 6 HOH B 10 410 25 HOH HOH . 
G 6 HOH B 11 411 15 HOH HOH . 
G 6 HOH B 12 412 48 HOH HOH . 
G 6 HOH B 13 413 42 HOH HOH . 
G 6 HOH B 14 414 2 HOH HOH . 
G 6 HOH B 15 415 29 HOH HOH . 
G 6 HOH B 16 416 27 HOH HOH . 
G 6 HOH B 17 417 36 HOH HOH . 
G 6 HOH B 18 418 40 HOH HOH . 
G 6 HOH B 19 419 43 HOH HOH . 
G 6 HOH B 20 420 54 HOH HOH . 
G 6 HOH B 21 421 22 HOH HOH . 
G 6 HOH B 22 422 55 HOH HOH . 
G 6 HOH B 23 423 41 HOH HOH . 
G 6 HOH B 24 424 39 HOH HOH . 
G 6 HOH B 25 425 37 HOH HOH . 
G 6 HOH B 26 426 28 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N GLU . . . C 3 -21.778 -17.543 13.01 1 32.63 ? N GLU 301 A 1 
HETATM 2 C CA GLU . . . C 3 -20.945 -18.26 12.038 1 32.54 ? CA GLU 301 A 1 
HETATM 3 C C GLU . . . C 3 -19.995 -17.325 11.298 1 30.48 ? C GLU 301 A 1 
HETATM 4 O O GLU . . . C 3 -19.246 -17.804 10.424 1 31.23 ? O GLU 301 A 1 
HETATM 5 C CB GLU . . . C 3 -21.822 -19.058 11.053 1 33.83 ? CB GLU 301 A 1 
HETATM 6 C CG GLU . . . C 3 -22.383 -20.354 11.619 1 38.31 ? CG GLU 301 A 1 
HETATM 7 C CD GLU . . . C 3 -21.471 -21.566 11.72 1 49.27 ? CD GLU 301 A 1 
HETATM 8 O OE1 GLU . . . C 3 -20.539 -21.708 10.894 1 37.87 ? OE1 GLU 301 A 1 
HETATM 9 O OE2 GLU . . . C 3 -21.746 -22.422 12.589 1 37.28 ? OE2 GLU 301 A 1 
HETATM 10 O OXT GLU . . . C 3 -19.988 -16.111 11.596 1 40.07 ? OXT GLU 301 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           10 
#