data_5I2N # _model_server_result.job_id ke6AFaIhc7csOIzv8YWx1Q _model_server_result.datetime_utc '2024-10-11 02:22:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i2n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 5I2N # _exptl.entry_id 5I2N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5I2N _cell.length_a 56.521 _cell.length_b 89.859 _cell.length_c 120.801 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I2N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 A CYS 31 1_555 A SG CYS 57 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf2 A SG CYS 38 A CYS 38 1_555 A SG CYS 58 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf3 A SG CYS 228 A CYS 228 1_555 A SG CYS 283 A CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf4 B SG CYS 29 B CYS 29 1_555 B SG CYS 63 B CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf5 B SG CYS 45 B CYS 45 1_555 B SG CYS 64 B CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc1 C CA CA . A CA 301 1_555 I O HOH . B HOH 483 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5I2N _atom_sites.fract_transf_matrix[1][1] 0.017693 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011129 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008278 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 301 1 CA CA . D 4 GLU A 1 302 1 GLU GLU . E 5 67J A 1 303 1 67J DRG . F 6 EPE B 1 301 1 EPE EPE . G 7 GLY B 1 302 1 GLY GLY . H 8 HOH A 1 401 71 HOH HOH . H 8 HOH A 2 402 111 HOH HOH . H 8 HOH A 3 403 17 HOH HOH . H 8 HOH A 4 404 189 HOH HOH . H 8 HOH A 5 405 3 HOH HOH . H 8 HOH A 6 406 19 HOH HOH . H 8 HOH A 7 407 34 HOH HOH . H 8 HOH A 8 408 6 HOH HOH . H 8 HOH A 9 409 8 HOH HOH . H 8 HOH A 10 410 45 HOH HOH . H 8 HOH A 11 411 22 HOH HOH . H 8 HOH A 12 412 64 HOH HOH . H 8 HOH A 13 413 144 HOH HOH . H 8 HOH A 14 414 28 HOH HOH . H 8 HOH A 15 415 15 HOH HOH . H 8 HOH A 16 416 78 HOH HOH . H 8 HOH A 17 417 2 HOH HOH . H 8 HOH A 18 418 66 HOH HOH . H 8 HOH A 19 419 136 HOH HOH . H 8 HOH A 20 420 110 HOH HOH . H 8 HOH A 21 421 207 HOH HOH . H 8 HOH A 22 422 83 HOH HOH . H 8 HOH A 23 423 91 HOH HOH . H 8 HOH A 24 424 101 HOH HOH . H 8 HOH A 25 425 250 HOH HOH . H 8 HOH A 26 426 204 HOH HOH . H 8 HOH A 27 427 54 HOH HOH . H 8 HOH A 28 428 73 HOH HOH . H 8 HOH A 29 429 99 HOH HOH . H 8 HOH A 30 430 40 HOH HOH . H 8 HOH A 31 431 97 HOH HOH . H 8 HOH A 32 432 126 HOH HOH . H 8 HOH A 33 433 68 HOH HOH . H 8 HOH A 34 434 137 HOH HOH . H 8 HOH A 35 435 12 HOH HOH . H 8 HOH A 36 436 21 HOH HOH . H 8 HOH A 37 437 123 HOH HOH . H 8 HOH A 38 438 230 HOH HOH . H 8 HOH A 39 439 96 HOH HOH . H 8 HOH A 40 440 125 HOH HOH . H 8 HOH A 41 441 100 HOH HOH . H 8 HOH A 42 442 16 HOH HOH . H 8 HOH A 43 443 155 HOH HOH . H 8 HOH A 44 444 175 HOH HOH . H 8 HOH A 45 445 120 HOH HOH . H 8 HOH A 46 446 1 HOH HOH . H 8 HOH A 47 447 95 HOH HOH . H 8 HOH A 48 448 55 HOH HOH . H 8 HOH A 49 449 122 HOH HOH . H 8 HOH A 50 450 5 HOH HOH . H 8 HOH A 51 451 184 HOH HOH . H 8 HOH A 52 452 176 HOH HOH . H 8 HOH A 53 453 106 HOH HOH . H 8 HOH A 54 454 20 HOH HOH . H 8 HOH A 55 455 109 HOH HOH . H 8 HOH A 56 456 115 HOH HOH . H 8 HOH A 57 457 7 HOH HOH . H 8 HOH A 58 458 43 HOH HOH . H 8 HOH A 59 459 63 HOH HOH . H 8 HOH A 60 460 225 HOH HOH . H 8 HOH A 61 461 218 HOH HOH . H 8 HOH A 62 462 260 HOH HOH . H 8 HOH A 63 463 180 HOH HOH . H 8 HOH A 64 464 244 HOH HOH . H 8 HOH A 65 465 11 HOH HOH . H 8 HOH A 66 466 177 HOH HOH . H 8 HOH A 67 467 86 HOH HOH . H 8 HOH A 68 468 282 HOH HOH . H 8 HOH A 69 469 135 HOH HOH . H 8 HOH A 70 470 98 HOH HOH . H 8 HOH A 71 471 79 HOH HOH . H 8 HOH A 72 472 172 HOH HOH . H 8 HOH A 73 473 215 HOH HOH . H 8 HOH A 74 474 224 HOH HOH . H 8 HOH A 75 475 128 HOH HOH . H 8 HOH A 76 476 80 HOH HOH . H 8 HOH A 77 477 178 HOH HOH . H 8 HOH A 78 478 153 HOH HOH . H 8 HOH A 79 479 212 HOH HOH . H 8 HOH A 80 480 49 HOH HOH . H 8 HOH A 81 481 56 HOH HOH . H 8 HOH A 82 482 148 HOH HOH . H 8 HOH A 83 483 4 HOH HOH . H 8 HOH A 84 484 46 HOH HOH . H 8 HOH A 85 485 193 HOH HOH . H 8 HOH A 86 486 103 HOH HOH . H 8 HOH A 87 487 35 HOH HOH . H 8 HOH A 88 488 216 HOH HOH . H 8 HOH A 89 489 158 HOH HOH . H 8 HOH A 90 490 167 HOH HOH . H 8 HOH A 91 491 192 HOH HOH . H 8 HOH A 92 492 262 HOH HOH . H 8 HOH A 93 493 10 HOH HOH . H 8 HOH A 94 494 156 HOH HOH . H 8 HOH A 95 495 171 HOH HOH . H 8 HOH A 96 496 132 HOH HOH . H 8 HOH A 97 497 254 HOH HOH . H 8 HOH A 98 498 75 HOH HOH . H 8 HOH A 99 499 236 HOH HOH . H 8 HOH A 100 500 107 HOH HOH . H 8 HOH A 101 501 197 HOH HOH . H 8 HOH A 102 502 36 HOH HOH . H 8 HOH A 103 503 26 HOH HOH . H 8 HOH A 104 504 70 HOH HOH . H 8 HOH A 105 505 118 HOH HOH . H 8 HOH A 106 506 240 HOH HOH . H 8 HOH A 107 507 161 HOH HOH . H 8 HOH A 108 508 113 HOH HOH . H 8 HOH A 109 509 105 HOH HOH . H 8 HOH A 110 510 50 HOH HOH . H 8 HOH A 111 511 39 HOH HOH . H 8 HOH A 112 512 159 HOH HOH . H 8 HOH A 113 513 24 HOH HOH . H 8 HOH A 114 514 76 HOH HOH . H 8 HOH A 115 515 41 HOH HOH . H 8 HOH A 116 516 187 HOH HOH . H 8 HOH A 117 517 170 HOH HOH . H 8 HOH A 118 518 273 HOH HOH . H 8 HOH A 119 519 169 HOH HOH . H 8 HOH A 120 520 149 HOH HOH . H 8 HOH A 121 521 221 HOH HOH . H 8 HOH A 122 522 82 HOH HOH . H 8 HOH A 123 523 165 HOH HOH . H 8 HOH A 124 524 182 HOH HOH . H 8 HOH A 125 525 239 HOH HOH . H 8 HOH A 126 526 181 HOH HOH . H 8 HOH A 127 527 223 HOH HOH . H 8 HOH A 128 528 247 HOH HOH . H 8 HOH A 129 529 142 HOH HOH . H 8 HOH A 130 530 211 HOH HOH . H 8 HOH A 131 531 62 HOH HOH . H 8 HOH A 132 532 281 HOH HOH . H 8 HOH A 133 533 265 HOH HOH . H 8 HOH A 134 534 117 HOH HOH . H 8 HOH A 135 535 51 HOH HOH . H 8 HOH A 136 536 241 HOH HOH . H 8 HOH A 137 537 274 HOH HOH . H 8 HOH A 138 538 163 HOH HOH . H 8 HOH A 139 539 293 HOH HOH . H 8 HOH A 140 540 279 HOH HOH . H 8 HOH A 141 541 194 HOH HOH . H 8 HOH A 142 542 249 HOH HOH . H 8 HOH A 143 543 288 HOH HOH . H 8 HOH A 144 544 92 HOH HOH . H 8 HOH A 145 545 256 HOH HOH . H 8 HOH A 146 546 119 HOH HOH . H 8 HOH A 147 547 235 HOH HOH . H 8 HOH A 148 548 203 HOH HOH . H 8 HOH A 149 549 285 HOH HOH . H 8 HOH A 150 550 245 HOH HOH . H 8 HOH A 151 551 209 HOH HOH . H 8 HOH A 152 552 206 HOH HOH . H 8 HOH A 153 553 284 HOH HOH . H 8 HOH A 154 554 227 HOH HOH . H 8 HOH A 155 555 255 HOH HOH . H 8 HOH A 156 556 214 HOH HOH . H 8 HOH A 157 557 72 HOH HOH . H 8 HOH A 158 558 292 HOH HOH . H 8 HOH A 159 559 185 HOH HOH . H 8 HOH A 160 560 272 HOH HOH . H 8 HOH A 161 561 229 HOH HOH . H 8 HOH A 162 562 220 HOH HOH . H 8 HOH A 163 563 268 HOH HOH . H 8 HOH A 164 564 275 HOH HOH . H 8 HOH A 165 565 243 HOH HOH . I 8 HOH B 1 401 58 HOH HOH . I 8 HOH B 2 402 146 HOH HOH . I 8 HOH B 3 403 13 HOH HOH . I 8 HOH B 4 404 57 HOH HOH . I 8 HOH B 5 405 74 HOH HOH . I 8 HOH B 6 406 195 HOH HOH . I 8 HOH B 7 407 32 HOH HOH . I 8 HOH B 8 408 23 HOH HOH . I 8 HOH B 9 409 196 HOH HOH . I 8 HOH B 10 410 25 HOH HOH . I 8 HOH B 11 411 67 HOH HOH . I 8 HOH B 12 412 138 HOH HOH . I 8 HOH B 13 413 84 HOH HOH . I 8 HOH B 14 414 89 HOH HOH . I 8 HOH B 15 415 59 HOH HOH . I 8 HOH B 16 416 38 HOH HOH . I 8 HOH B 17 417 18 HOH HOH . I 8 HOH B 18 418 77 HOH HOH . I 8 HOH B 19 419 9 HOH HOH . I 8 HOH B 20 420 145 HOH HOH . I 8 HOH B 21 421 157 HOH HOH . I 8 HOH B 22 422 233 HOH HOH . I 8 HOH B 23 423 47 HOH HOH . I 8 HOH B 24 424 108 HOH HOH . I 8 HOH B 25 425 65 HOH HOH . I 8 HOH B 26 426 61 HOH HOH . I 8 HOH B 27 427 69 HOH HOH . I 8 HOH B 28 428 290 HOH HOH . I 8 HOH B 29 429 154 HOH HOH . I 8 HOH B 30 430 151 HOH HOH . I 8 HOH B 31 431 129 HOH HOH . I 8 HOH B 32 432 33 HOH HOH . I 8 HOH B 33 433 27 HOH HOH . I 8 HOH B 34 434 133 HOH HOH . I 8 HOH B 35 435 90 HOH HOH . I 8 HOH B 36 436 202 HOH HOH . I 8 HOH B 37 437 190 HOH HOH . I 8 HOH B 38 438 104 HOH HOH . I 8 HOH B 39 439 160 HOH HOH . I 8 HOH B 40 440 166 HOH HOH . I 8 HOH B 41 441 60 HOH HOH . I 8 HOH B 42 442 217 HOH HOH . I 8 HOH B 43 443 85 HOH HOH . I 8 HOH B 44 444 248 HOH HOH . I 8 HOH B 45 445 127 HOH HOH . I 8 HOH B 46 446 174 HOH HOH . I 8 HOH B 47 447 259 HOH HOH . I 8 HOH B 48 448 31 HOH HOH . I 8 HOH B 49 449 219 HOH HOH . I 8 HOH B 50 450 116 HOH HOH . I 8 HOH B 51 451 134 HOH HOH . I 8 HOH B 52 452 205 HOH HOH . I 8 HOH B 53 453 14 HOH HOH . I 8 HOH B 54 454 53 HOH HOH . I 8 HOH B 55 455 173 HOH HOH . I 8 HOH B 56 456 130 HOH HOH . I 8 HOH B 57 457 150 HOH HOH . I 8 HOH B 58 458 102 HOH HOH . I 8 HOH B 59 459 94 HOH HOH . I 8 HOH B 60 460 37 HOH HOH . I 8 HOH B 61 461 44 HOH HOH . I 8 HOH B 62 462 29 HOH HOH . I 8 HOH B 63 463 88 HOH HOH . I 8 HOH B 64 464 277 HOH HOH . I 8 HOH B 65 465 291 HOH HOH . I 8 HOH B 66 466 188 HOH HOH . I 8 HOH B 67 467 222 HOH HOH . I 8 HOH B 68 468 232 HOH HOH . I 8 HOH B 69 469 42 HOH HOH . I 8 HOH B 70 470 266 HOH HOH . I 8 HOH B 71 471 286 HOH HOH . I 8 HOH B 72 472 152 HOH HOH . I 8 HOH B 73 473 179 HOH HOH . I 8 HOH B 74 474 252 HOH HOH . I 8 HOH B 75 475 93 HOH HOH . I 8 HOH B 76 476 269 HOH HOH . I 8 HOH B 77 477 164 HOH HOH . I 8 HOH B 78 478 208 HOH HOH . I 8 HOH B 79 479 228 HOH HOH . I 8 HOH B 80 480 168 HOH HOH . I 8 HOH B 81 481 251 HOH HOH . I 8 HOH B 82 482 30 HOH HOH . I 8 HOH B 83 483 226 HOH HOH . I 8 HOH B 84 484 52 HOH HOH . I 8 HOH B 85 485 114 HOH HOH . I 8 HOH B 86 486 201 HOH HOH . I 8 HOH B 87 487 124 HOH HOH . I 8 HOH B 88 488 263 HOH HOH . I 8 HOH B 89 489 147 HOH HOH . I 8 HOH B 90 490 213 HOH HOH . I 8 HOH B 91 491 48 HOH HOH . I 8 HOH B 92 492 242 HOH HOH . I 8 HOH B 93 493 81 HOH HOH . I 8 HOH B 94 494 143 HOH HOH . I 8 HOH B 95 495 112 HOH HOH . I 8 HOH B 96 496 121 HOH HOH . I 8 HOH B 97 497 271 HOH HOH . I 8 HOH B 98 498 289 HOH HOH . I 8 HOH B 99 499 258 HOH HOH . I 8 HOH B 100 500 186 HOH HOH . I 8 HOH B 101 501 139 HOH HOH . I 8 HOH B 102 502 198 HOH HOH . I 8 HOH B 103 503 267 HOH HOH . I 8 HOH B 104 504 280 HOH HOH . I 8 HOH B 105 505 87 HOH HOH . I 8 HOH B 106 506 283 HOH HOH . I 8 HOH B 107 507 295 HOH HOH . I 8 HOH B 108 508 200 HOH HOH . I 8 HOH B 109 509 231 HOH HOH . I 8 HOH B 110 510 191 HOH HOH . I 8 HOH B 111 511 131 HOH HOH . I 8 HOH B 112 512 276 HOH HOH . I 8 HOH B 113 513 294 HOH HOH . I 8 HOH B 114 514 270 HOH HOH . I 8 HOH B 115 515 287 HOH HOH . I 8 HOH B 116 516 246 HOH HOH . I 8 HOH B 117 517 141 HOH HOH . I 8 HOH B 118 518 162 HOH HOH . I 8 HOH B 119 519 264 HOH HOH . I 8 HOH B 120 520 183 HOH HOH . I 8 HOH B 121 521 278 HOH HOH . I 8 HOH B 122 522 234 HOH HOH . I 8 HOH B 123 523 199 HOH HOH . I 8 HOH B 124 524 253 HOH HOH . I 8 HOH B 125 525 210 HOH HOH . I 8 HOH B 126 526 140 HOH HOH . I 8 HOH B 127 527 237 HOH HOH . I 8 HOH B 128 528 261 HOH HOH . I 8 HOH B 129 529 257 HOH HOH . I 8 HOH B 130 530 238 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -9.769 _atom_site.Cartn_y -3.431 _atom_site.Cartn_z 23.712 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 83.12 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #