data_5I40 # _model_server_result.job_id ExL9NfIw35mpBIKEYmwYdA _model_server_result.datetime_utc '2024-10-19 03:59:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i40 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":206}' # _entry.id 5I40 # _exptl.entry_id 5I40 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 148.162 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-methyl-1,6-dihydro-7H-pyrrolo[2,3-c]pyridin-7-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 70.47 _cell.angle_beta 73.32 _cell.angle_gamma 74.52 _cell.entry_id 5I40 _cell.length_a 24.58 _cell.length_b 33.745 _cell.length_c 39.503 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I40 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H8 N2 O' _chem_comp.formula_weight 148.162 _chem_comp.id 67N _chem_comp.mon_nstd_flag . _chem_comp.name 6-methyl-1,6-dihydro-7H-pyrrolo[2,3-c]pyridin-7-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 67N sing 1 n n C3 N2 67N sing 2 n n C3 C4 67N doub 3 n n N2 C11 67N sing 4 n n C4 C5 67N sing 5 n n C11 O12 67N doub 6 n n C11 C10 67N sing 7 n n C5 C10 67N doub 8 n y C5 C6 67N sing 9 n y C10 N8 67N sing 10 n y C6 C7 67N doub 11 n y N8 C7 67N sing 12 n y C4 H1 67N sing 13 n n C6 H2 67N sing 14 n n C7 H3 67N sing 15 n n C3 H4 67N sing 16 n n C1 H5 67N sing 17 n n C1 H6 67N sing 18 n n C1 H7 67N sing 19 n n N8 H9 67N sing 20 n n # _atom_sites.entry_id 5I40 _atom_sites.fract_transf_matrix[1][1] 0.040683 _atom_sites.fract_transf_matrix[1][2] -0.011269 _atom_sites.fract_transf_matrix[1][3] -0.009416 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.03075 _atom_sites.fract_transf_matrix[2][3] -0.008938 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02752 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 201 1 EDO EDO . C 2 EDO A 1 202 2 EDO EDO . D 2 EDO A 1 203 3 EDO EDO . E 2 EDO A 1 204 4 EDO EDO . F 3 PEG A 1 205 5 PEG PEG . G 4 67N A 1 206 1 67N DRG . H 5 HOH A 1 301 66 HOH HOH . H 5 HOH A 2 302 175 HOH HOH . H 5 HOH A 3 303 78 HOH HOH . H 5 HOH A 4 304 36 HOH HOH . H 5 HOH A 5 305 72 HOH HOH . H 5 HOH A 6 306 3 HOH HOH . H 5 HOH A 7 307 54 HOH HOH . H 5 HOH A 8 308 32 HOH HOH . H 5 HOH A 9 309 19 HOH HOH . H 5 HOH A 10 310 81 HOH HOH . H 5 HOH A 11 311 63 HOH HOH . H 5 HOH A 12 312 169 HOH HOH . H 5 HOH A 13 313 43 HOH HOH . H 5 HOH A 14 314 48 HOH HOH . H 5 HOH A 15 315 151 HOH HOH . H 5 HOH A 16 316 7 HOH HOH . H 5 HOH A 17 317 152 HOH HOH . H 5 HOH A 18 318 171 HOH HOH . H 5 HOH A 19 319 160 HOH HOH . H 5 HOH A 20 320 20 HOH HOH . H 5 HOH A 21 321 27 HOH HOH . H 5 HOH A 22 322 182 HOH HOH . H 5 HOH A 23 323 191 HOH HOH . H 5 HOH A 24 324 4 HOH HOH . H 5 HOH A 25 325 156 HOH HOH . H 5 HOH A 26 326 1 HOH HOH . H 5 HOH A 27 327 172 HOH HOH . H 5 HOH A 28 328 15 HOH HOH . H 5 HOH A 29 329 65 HOH HOH . H 5 HOH A 30 330 144 HOH HOH . H 5 HOH A 31 331 24 HOH HOH . H 5 HOH A 32 332 80 HOH HOH . H 5 HOH A 33 333 12 HOH HOH . H 5 HOH A 34 334 44 HOH HOH . H 5 HOH A 35 335 38 HOH HOH . H 5 HOH A 36 336 18 HOH HOH . H 5 HOH A 37 337 41 HOH HOH . H 5 HOH A 38 338 45 HOH HOH . H 5 HOH A 39 339 16 HOH HOH . H 5 HOH A 40 340 173 HOH HOH . H 5 HOH A 41 341 5 HOH HOH . H 5 HOH A 42 342 141 HOH HOH . H 5 HOH A 43 343 150 HOH HOH . H 5 HOH A 44 344 47 HOH HOH . H 5 HOH A 45 345 60 HOH HOH . H 5 HOH A 46 346 33 HOH HOH . H 5 HOH A 47 347 17 HOH HOH . H 5 HOH A 48 348 140 HOH HOH . H 5 HOH A 49 349 30 HOH HOH . H 5 HOH A 50 350 14 HOH HOH . H 5 HOH A 51 351 49 HOH HOH . H 5 HOH A 52 352 50 HOH HOH . H 5 HOH A 53 353 146 HOH HOH . H 5 HOH A 54 354 8 HOH HOH . H 5 HOH A 55 355 21 HOH HOH . H 5 HOH A 56 356 193 HOH HOH . H 5 HOH A 57 357 153 HOH HOH . H 5 HOH A 58 358 34 HOH HOH . H 5 HOH A 59 359 86 HOH HOH . H 5 HOH A 60 360 13 HOH HOH . H 5 HOH A 61 361 6 HOH HOH . H 5 HOH A 62 362 28 HOH HOH . H 5 HOH A 63 363 31 HOH HOH . H 5 HOH A 64 364 9 HOH HOH . H 5 HOH A 65 365 159 HOH HOH . H 5 HOH A 66 366 83 HOH HOH . H 5 HOH A 67 367 154 HOH HOH . H 5 HOH A 68 368 64 HOH HOH . H 5 HOH A 69 369 61 HOH HOH . H 5 HOH A 70 370 22 HOH HOH . H 5 HOH A 71 371 89 HOH HOH . H 5 HOH A 72 372 51 HOH HOH . H 5 HOH A 73 373 143 HOH HOH . H 5 HOH A 74 374 53 HOH HOH . H 5 HOH A 75 375 165 HOH HOH . H 5 HOH A 76 376 186 HOH HOH . H 5 HOH A 77 377 11 HOH HOH . H 5 HOH A 78 378 158 HOH HOH . H 5 HOH A 79 379 167 HOH HOH . H 5 HOH A 80 380 163 HOH HOH . H 5 HOH A 81 381 178 HOH HOH . H 5 HOH A 82 382 59 HOH HOH . H 5 HOH A 83 383 2 HOH HOH . H 5 HOH A 84 384 40 HOH HOH . H 5 HOH A 85 385 155 HOH HOH . H 5 HOH A 86 386 70 HOH HOH . H 5 HOH A 87 387 25 HOH HOH . H 5 HOH A 88 388 91 HOH HOH . H 5 HOH A 89 389 190 HOH HOH . H 5 HOH A 90 390 192 HOH HOH . H 5 HOH A 91 391 145 HOH HOH . H 5 HOH A 92 392 42 HOH HOH . H 5 HOH A 93 393 94 HOH HOH . H 5 HOH A 94 394 35 HOH HOH . H 5 HOH A 95 395 77 HOH HOH . H 5 HOH A 96 396 93 HOH HOH . H 5 HOH A 97 397 139 HOH HOH . H 5 HOH A 98 398 170 HOH HOH . H 5 HOH A 99 399 82 HOH HOH . H 5 HOH A 100 400 142 HOH HOH . H 5 HOH A 101 401 110 HOH HOH . H 5 HOH A 102 402 85 HOH HOH . H 5 HOH A 103 403 76 HOH HOH . H 5 HOH A 104 404 10 HOH HOH . H 5 HOH A 105 405 84 HOH HOH . H 5 HOH A 106 406 39 HOH HOH . H 5 HOH A 107 407 189 HOH HOH . H 5 HOH A 108 408 87 HOH HOH . H 5 HOH A 109 409 116 HOH HOH . H 5 HOH A 110 410 55 HOH HOH . H 5 HOH A 111 411 26 HOH HOH . H 5 HOH A 112 412 102 HOH HOH . H 5 HOH A 113 413 181 HOH HOH . H 5 HOH A 114 414 74 HOH HOH . H 5 HOH A 115 415 101 HOH HOH . H 5 HOH A 116 416 71 HOH HOH . H 5 HOH A 117 417 176 HOH HOH . H 5 HOH A 118 418 23 HOH HOH . H 5 HOH A 119 419 90 HOH HOH . H 5 HOH A 120 420 185 HOH HOH . H 5 HOH A 121 421 179 HOH HOH . H 5 HOH A 122 422 96 HOH HOH . H 5 HOH A 123 423 67 HOH HOH . H 5 HOH A 124 424 69 HOH HOH . H 5 HOH A 125 425 98 HOH HOH . H 5 HOH A 126 426 88 HOH HOH . H 5 HOH A 127 427 133 HOH HOH . H 5 HOH A 128 428 106 HOH HOH . H 5 HOH A 129 429 177 HOH HOH . H 5 HOH A 130 430 195 HOH HOH . H 5 HOH A 131 431 75 HOH HOH . H 5 HOH A 132 432 157 HOH HOH . H 5 HOH A 133 433 29 HOH HOH . H 5 HOH A 134 434 37 HOH HOH . H 5 HOH A 135 435 58 HOH HOH . H 5 HOH A 136 436 184 HOH HOH . H 5 HOH A 137 437 56 HOH HOH . H 5 HOH A 138 438 188 HOH HOH . H 5 HOH A 139 439 147 HOH HOH . H 5 HOH A 140 440 183 HOH HOH . H 5 HOH A 141 441 79 HOH HOH . H 5 HOH A 142 442 97 HOH HOH . H 5 HOH A 143 443 62 HOH HOH . H 5 HOH A 144 444 68 HOH HOH . H 5 HOH A 145 445 92 HOH HOH . H 5 HOH A 146 446 104 HOH HOH . H 5 HOH A 147 447 162 HOH HOH . H 5 HOH A 148 448 149 HOH HOH . H 5 HOH A 149 449 57 HOH HOH . H 5 HOH A 150 450 187 HOH HOH . H 5 HOH A 151 451 46 HOH HOH . H 5 HOH A 152 452 168 HOH HOH . H 5 HOH A 153 453 109 HOH HOH . H 5 HOH A 154 454 112 HOH HOH . H 5 HOH A 155 455 148 HOH HOH . H 5 HOH A 156 456 194 HOH HOH . H 5 HOH A 157 457 100 HOH HOH . H 5 HOH A 158 458 119 HOH HOH . H 5 HOH A 159 459 117 HOH HOH . H 5 HOH A 160 460 123 HOH HOH . H 5 HOH A 161 461 174 HOH HOH . H 5 HOH A 162 462 111 HOH HOH . H 5 HOH A 163 463 108 HOH HOH . H 5 HOH A 164 464 107 HOH HOH . H 5 HOH A 165 465 180 HOH HOH . H 5 HOH A 166 466 73 HOH HOH . H 5 HOH A 167 467 120 HOH HOH . H 5 HOH A 168 468 52 HOH HOH . H 5 HOH A 169 469 164 HOH HOH . H 5 HOH A 170 470 122 HOH HOH . H 5 HOH A 171 471 113 HOH HOH . H 5 HOH A 172 472 129 HOH HOH . H 5 HOH A 173 473 126 HOH HOH . H 5 HOH A 174 474 115 HOH HOH . H 5 HOH A 175 475 99 HOH HOH . H 5 HOH A 176 476 95 HOH HOH . H 5 HOH A 177 477 130 HOH HOH . H 5 HOH A 178 478 161 HOH HOH . H 5 HOH A 179 479 124 HOH HOH . H 5 HOH A 180 480 105 HOH HOH . H 5 HOH A 181 481 114 HOH HOH . H 5 HOH A 182 482 128 HOH HOH . H 5 HOH A 183 483 131 HOH HOH . H 5 HOH A 184 484 103 HOH HOH . H 5 HOH A 185 485 118 HOH HOH . H 5 HOH A 186 486 136 HOH HOH . H 5 HOH A 187 487 127 HOH HOH . H 5 HOH A 188 488 166 HOH HOH . H 5 HOH A 189 489 138 HOH HOH . H 5 HOH A 190 490 132 HOH HOH . H 5 HOH A 191 491 121 HOH HOH . H 5 HOH A 192 492 137 HOH HOH . H 5 HOH A 193 493 135 HOH HOH . H 5 HOH A 194 494 125 HOH HOH . H 5 HOH A 195 495 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 67N . . . G 4 -16.713 6.072 9.298 1 12.23 ? C4 67N 206 A 1 HETATM 2 C C5 67N . . . G 4 -17.309 6.516 10.552 1 11.7 ? C5 67N 206 A 1 HETATM 3 C C6 67N . . . G 4 -16.858 7.27 11.658 1 12.54 ? C6 67N 206 A 1 HETATM 4 C C11 67N . . . G 4 -19.383 5.398 9.894 1 10.45 ? C11 67N 206 A 1 HETATM 5 C C7 67N . . . G 4 -17.884 7.364 12.527 1 13.45 ? C7 67N 206 A 1 HETATM 6 C C10 67N . . . G 4 -18.642 6.16 10.82 1 10.58 ? C10 67N 206 A 1 HETATM 7 N N2 67N . . . G 4 -18.774 5.029 8.751 1 10.46 ? N2 67N 206 A 1 HETATM 8 C C3 67N . . . G 4 -17.477 5.354 8.455 1 11.38 ? C3 67N 206 A 1 HETATM 9 C C1 67N . . . G 4 -19.546 4.253 7.782 1 10.66 ? C1 67N 206 A 1 HETATM 10 N N8 67N . . . G 4 -18.966 6.693 12.036 1 10.93 ? N8 67N 206 A 1 HETATM 11 O O12 67N . . . G 4 -20.555 5.074 10.118 1 10.62 ? O12 67N 206 A 1 HETATM 12 H H9 67N . . . G 4 -19.826 6.61 12.477 1 13.12 ? H9 67N 206 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #