data_5I4J # _model_server_result.job_id zF25vmVM0K2B6AVT6XkYng _model_server_result.datetime_utc '2025-03-04 08:29:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i4j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":202}' # _entry.id 5I4J # _exptl.entry_id 5I4J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5I4J _cell.length_a 100.92 _cell.length_b 100.92 _cell.length_c 144.27 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_445 -y-1,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -50.46 -87.399284 0 3 'crystal symmetry operation' 3_545 -x+y,-x-1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 50.46 -87.399284 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 46 A HIS 51 1_555 G ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc2 A NE2 HIS 73 A HIS 78 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc3 A OE1 GLU 77 A GLU 82 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc4 E ZN ZN . A ZN 201 1_555 B NE2 HIS 46 B HIS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc5 G ZN ZN . A ZN 203 1_555 B NE2 HIS 73 B HIS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc6 G ZN ZN . A ZN 203 1_555 B OE2 GLU 77 B GLU 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc7 C NE2 HIS 46 C HIS 51 1_555 I ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc8 C NE2 HIS 73 C HIS 78 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc9 C OE2 GLU 77 C GLU 82 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc10 H ZN ZN . C ZN 201 1_555 D NE2 HIS 46 D HIS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc11 I ZN ZN . C ZN 202 1_555 D NE2 HIS 73 D HIS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5I4J _atom_sites.fract_transf_matrix[1][1] 0.009909 _atom_sites.fract_transf_matrix[1][2] 0.005721 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011442 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006931 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 201 1 ZN ZN . F 3 EPE A 1 202 252 EPE EPE . G 2 ZN A 1 203 1 ZN ZN . H 2 ZN C 1 201 1 ZN ZN . I 2 ZN C 1 202 1 ZN ZN . J 4 HOH A 1 301 45 HOH HOH . J 4 HOH A 2 302 29 HOH HOH . J 4 HOH A 3 303 56 HOH HOH . J 4 HOH A 4 304 18 HOH HOH . J 4 HOH A 5 305 47 HOH HOH . J 4 HOH A 6 306 46 HOH HOH . J 4 HOH A 7 307 6 HOH HOH . J 4 HOH A 8 308 32 HOH HOH . J 4 HOH A 9 309 73 HOH HOH . J 4 HOH A 10 310 30 HOH HOH . J 4 HOH A 11 311 9 HOH HOH . J 4 HOH A 12 312 37 HOH HOH . J 4 HOH A 13 313 68 HOH HOH . J 4 HOH A 14 314 36 HOH HOH . J 4 HOH A 15 315 66 HOH HOH . J 4 HOH A 16 316 31 HOH HOH . J 4 HOH A 17 317 24 HOH HOH . J 4 HOH A 18 318 27 HOH HOH . J 4 HOH A 19 319 38 HOH HOH . J 4 HOH A 20 320 13 HOH HOH . J 4 HOH A 21 321 67 HOH HOH . J 4 HOH A 22 322 76 HOH HOH . J 4 HOH A 23 323 40 HOH HOH . J 4 HOH A 24 324 41 HOH HOH . K 4 HOH B 1 301 17 HOH HOH . K 4 HOH B 2 302 71 HOH HOH . K 4 HOH B 3 303 70 HOH HOH . K 4 HOH B 4 304 12 HOH HOH . K 4 HOH B 5 305 72 HOH HOH . K 4 HOH B 6 306 25 HOH HOH . K 4 HOH B 7 307 77 HOH HOH . K 4 HOH B 8 308 33 HOH HOH . K 4 HOH B 9 309 20 HOH HOH . K 4 HOH B 10 310 55 HOH HOH . K 4 HOH B 11 311 19 HOH HOH . K 4 HOH B 12 312 2 HOH HOH . K 4 HOH B 13 313 59 HOH HOH . K 4 HOH B 14 314 4 HOH HOH . K 4 HOH B 15 315 54 HOH HOH . K 4 HOH B 16 316 53 HOH HOH . K 4 HOH B 17 317 57 HOH HOH . K 4 HOH B 18 318 14 HOH HOH . K 4 HOH B 19 319 79 HOH HOH . K 4 HOH B 20 320 78 HOH HOH . K 4 HOH B 21 321 50 HOH HOH . K 4 HOH B 22 322 58 HOH HOH . L 4 HOH C 1 301 8 HOH HOH . L 4 HOH C 2 302 62 HOH HOH . L 4 HOH C 3 303 5 HOH HOH . L 4 HOH C 4 304 81 HOH HOH . L 4 HOH C 5 305 34 HOH HOH . L 4 HOH C 6 306 82 HOH HOH . L 4 HOH C 7 307 84 HOH HOH . L 4 HOH C 8 308 80 HOH HOH . M 4 HOH D 1 301 15 HOH HOH . M 4 HOH D 2 302 3 HOH HOH . M 4 HOH D 3 303 61 HOH HOH . M 4 HOH D 4 304 11 HOH HOH . M 4 HOH D 5 305 10 HOH HOH . M 4 HOH D 6 306 22 HOH HOH . M 4 HOH D 7 307 74 HOH HOH . M 4 HOH D 8 308 7 HOH HOH . M 4 HOH D 9 309 48 HOH HOH . M 4 HOH D 10 310 83 HOH HOH . M 4 HOH D 11 311 26 HOH HOH . M 4 HOH D 12 312 60 HOH HOH . M 4 HOH D 13 313 35 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x -16.026 _atom_site.Cartn_y -56.141 _atom_site.Cartn_z 16.856 _atom_site.occupancy 0.69 _atom_site.B_iso_or_equiv 77.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 202 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #