data_5I5C # _model_server_result.job_id Ijd8AO26qy3BE-cH_RDOaw _model_server_result.datetime_utc '2024-12-04 08:38:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i5c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 5I5C # _exptl.entry_id 5I5C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.02 _cell.angle_gamma 90 _cell.entry_id 5I5C _cell.length_a 30.743 _cell.length_b 46.229 _cell.length_c 40.064 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I5C _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 35 A CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf2 A SG CYS 12 A CYS 12 1_555 A SG CYS 28 A CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf3 A SG CYS 17 A CYS 17 1_555 A SG CYS 32 A CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 3 B CYS 3 1_555 B SG CYS 35 B CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf5 B SG CYS 12 B CYS 12 1_555 B SG CYS 28 B CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf6 B SG CYS 17 B CYS 17 1_555 B SG CYS 32 B CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf7 C SG CYS 3 C CYS 3 1_555 C SG CYS 35 C CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? disulf ? disulf8 C SG CYS 12 C CYS 12 1_555 C SG CYS 28 C CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf9 C SG CYS 17 C CYS 17 1_555 C SG CYS 32 C CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? covale ? covale1 A C LYS 30 A LYS 30 1_555 A N ALO 31 A ALO 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 ? covale ? covale2 A C ALO 31 A ALO 31 1_555 A N CYS 32 A CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.388 ? covale ? covale3 B C LYS 30 B LYS 30 1_555 B N ALO 31 B ALO 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.296 ? covale ? covale4 B C ALO 31 B ALO 31 1_555 B N CYS 32 B CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? covale ? covale5 C C LYS 30 C LYS 30 1_555 C N ALO 31 C ALO 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale6 C C ALO 31 C ALO 31 1_555 C N CYS 32 C CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.392 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 285 n n S O2 SO4 doub 286 n n S O3 SO4 sing 287 n n S O4 SO4 sing 288 n n # _atom_sites.entry_id 5I5C _atom_sites.fract_transf_matrix[1][1] 0.032528 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010583 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021631 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026248 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 101 9 SO4 SO4 . E 2 SO4 A 1 102 11 SO4 SO4 . F 2 SO4 A 1 103 12 SO4 SO4 . G 3 LI B 1 101 1 LI LI . H 2 SO4 C 1 101 2 SO4 SO4 . I 4 GOL C 1 102 1 GOL GOL . J 3 LI C 1 103 1 LI LI . K 5 HOH A 1 201 170 HOH HOH . K 5 HOH A 2 202 141 HOH HOH . K 5 HOH A 3 203 4 HOH HOH . K 5 HOH A 4 204 98 HOH HOH . K 5 HOH A 5 205 75 HOH HOH . K 5 HOH A 6 206 131 HOH HOH . K 5 HOH A 7 207 23 HOH HOH . K 5 HOH A 8 208 41 HOH HOH . K 5 HOH A 9 209 19 HOH HOH . K 5 HOH A 10 210 29 HOH HOH . K 5 HOH A 11 211 44 HOH HOH . K 5 HOH A 12 212 6 HOH HOH . K 5 HOH A 13 213 138 HOH HOH . K 5 HOH A 14 214 28 HOH HOH . K 5 HOH A 15 215 125 HOH HOH . K 5 HOH A 16 216 17 HOH HOH . K 5 HOH A 17 217 10 HOH HOH . K 5 HOH A 18 218 56 HOH HOH . K 5 HOH A 19 219 54 HOH HOH . K 5 HOH A 20 220 117 HOH HOH . K 5 HOH A 21 221 16 HOH HOH . K 5 HOH A 22 222 2 HOH HOH . K 5 HOH A 23 223 99 HOH HOH . K 5 HOH A 24 224 130 HOH HOH . K 5 HOH A 25 225 111 HOH HOH . K 5 HOH A 26 226 71 HOH HOH . K 5 HOH A 27 227 8 HOH HOH . K 5 HOH A 28 228 165 HOH HOH . K 5 HOH A 29 229 20 HOH HOH . K 5 HOH A 30 230 46 HOH HOH . K 5 HOH A 31 231 49 HOH HOH . K 5 HOH A 32 232 50 HOH HOH . K 5 HOH A 33 233 51 HOH HOH . K 5 HOH A 34 234 33 HOH HOH . K 5 HOH A 35 235 145 HOH HOH . K 5 HOH A 36 236 53 HOH HOH . K 5 HOH A 37 237 87 HOH HOH . K 5 HOH A 38 238 127 HOH HOH . K 5 HOH A 39 239 140 HOH HOH . K 5 HOH A 40 240 97 HOH HOH . K 5 HOH A 41 241 76 HOH HOH . K 5 HOH A 42 242 45 HOH HOH . K 5 HOH A 43 243 34 HOH HOH . K 5 HOH A 44 244 169 HOH HOH . K 5 HOH A 45 245 94 HOH HOH . K 5 HOH A 46 246 55 HOH HOH . K 5 HOH A 47 247 123 HOH HOH . K 5 HOH A 48 248 74 HOH HOH . K 5 HOH A 49 249 73 HOH HOH . K 5 HOH A 50 250 88 HOH HOH . K 5 HOH A 51 251 86 HOH HOH . K 5 HOH A 52 252 36 HOH HOH . K 5 HOH A 53 253 126 HOH HOH . K 5 HOH A 54 254 84 HOH HOH . K 5 HOH A 55 255 167 HOH HOH . K 5 HOH A 56 256 52 HOH HOH . K 5 HOH A 57 257 104 HOH HOH . K 5 HOH A 58 258 102 HOH HOH . K 5 HOH A 59 259 116 HOH HOH . K 5 HOH A 60 260 115 HOH HOH . K 5 HOH A 61 261 110 HOH HOH . K 5 HOH A 62 262 82 HOH HOH . K 5 HOH A 63 263 108 HOH HOH . L 5 HOH B 1 201 163 HOH HOH . L 5 HOH B 2 202 85 HOH HOH . L 5 HOH B 3 203 83 HOH HOH . L 5 HOH B 4 204 22 HOH HOH . L 5 HOH B 5 205 65 HOH HOH . L 5 HOH B 6 206 11 HOH HOH . L 5 HOH B 7 207 13 HOH HOH . L 5 HOH B 8 208 149 HOH HOH . L 5 HOH B 9 209 61 HOH HOH . L 5 HOH B 10 210 26 HOH HOH . L 5 HOH B 11 211 63 HOH HOH . L 5 HOH B 12 212 14 HOH HOH . L 5 HOH B 13 213 58 HOH HOH . L 5 HOH B 14 214 21 HOH HOH . L 5 HOH B 15 215 31 HOH HOH . L 5 HOH B 16 216 132 HOH HOH . L 5 HOH B 17 217 107 HOH HOH . L 5 HOH B 18 218 119 HOH HOH . L 5 HOH B 19 219 151 HOH HOH . L 5 HOH B 20 220 3 HOH HOH . L 5 HOH B 21 221 139 HOH HOH . L 5 HOH B 22 222 129 HOH HOH . L 5 HOH B 23 223 64 HOH HOH . L 5 HOH B 24 224 40 HOH HOH . L 5 HOH B 25 225 37 HOH HOH . L 5 HOH B 26 226 77 HOH HOH . L 5 HOH B 27 227 68 HOH HOH . L 5 HOH B 28 228 25 HOH HOH . L 5 HOH B 29 229 150 HOH HOH . L 5 HOH B 30 230 30 HOH HOH . L 5 HOH B 31 231 157 HOH HOH . L 5 HOH B 32 232 112 HOH HOH . L 5 HOH B 33 233 66 HOH HOH . L 5 HOH B 34 234 81 HOH HOH . L 5 HOH B 35 235 156 HOH HOH . L 5 HOH B 36 236 118 HOH HOH . L 5 HOH B 37 237 158 HOH HOH . L 5 HOH B 38 238 60 HOH HOH . L 5 HOH B 39 239 164 HOH HOH . L 5 HOH B 40 240 57 HOH HOH . L 5 HOH B 41 241 105 HOH HOH . L 5 HOH B 42 242 122 HOH HOH . L 5 HOH B 43 243 155 HOH HOH . L 5 HOH B 44 244 38 HOH HOH . L 5 HOH B 45 245 172 HOH HOH . L 5 HOH B 46 246 101 HOH HOH . L 5 HOH B 47 247 59 HOH HOH . L 5 HOH B 48 248 43 HOH HOH . L 5 HOH B 49 249 67 HOH HOH . L 5 HOH B 50 250 135 HOH HOH . L 5 HOH B 51 251 171 HOH HOH . L 5 HOH B 52 252 128 HOH HOH . L 5 HOH B 53 253 106 HOH HOH . L 5 HOH B 54 254 62 HOH HOH . M 5 HOH C 1 201 100 HOH HOH . M 5 HOH C 2 202 48 HOH HOH . M 5 HOH C 3 203 147 HOH HOH . M 5 HOH C 4 204 168 HOH HOH . M 5 HOH C 5 205 166 HOH HOH . M 5 HOH C 6 206 120 HOH HOH . M 5 HOH C 7 207 9 HOH HOH . M 5 HOH C 8 208 18 HOH HOH . M 5 HOH C 9 209 109 HOH HOH . M 5 HOH C 10 210 42 HOH HOH . M 5 HOH C 11 211 1 HOH HOH . M 5 HOH C 12 212 93 HOH HOH . M 5 HOH C 13 213 35 HOH HOH . M 5 HOH C 14 214 92 HOH HOH . M 5 HOH C 15 215 69 HOH HOH . M 5 HOH C 16 216 124 HOH HOH . M 5 HOH C 17 217 5 HOH HOH . M 5 HOH C 18 218 27 HOH HOH . M 5 HOH C 19 219 142 HOH HOH . M 5 HOH C 20 220 39 HOH HOH . M 5 HOH C 21 221 144 HOH HOH . M 5 HOH C 22 222 153 HOH HOH . M 5 HOH C 23 223 133 HOH HOH . M 5 HOH C 24 224 15 HOH HOH . M 5 HOH C 25 225 7 HOH HOH . M 5 HOH C 26 226 134 HOH HOH . M 5 HOH C 27 227 24 HOH HOH . M 5 HOH C 28 228 91 HOH HOH . M 5 HOH C 29 229 12 HOH HOH . M 5 HOH C 30 230 160 HOH HOH . M 5 HOH C 31 231 173 HOH HOH . M 5 HOH C 32 232 114 HOH HOH . M 5 HOH C 33 233 72 HOH HOH . M 5 HOH C 34 234 159 HOH HOH . M 5 HOH C 35 235 70 HOH HOH . M 5 HOH C 36 236 96 HOH HOH . M 5 HOH C 37 237 47 HOH HOH . M 5 HOH C 38 238 90 HOH HOH . M 5 HOH C 39 239 161 HOH HOH . M 5 HOH C 40 240 136 HOH HOH . M 5 HOH C 41 241 154 HOH HOH . M 5 HOH C 42 242 162 HOH HOH . M 5 HOH C 43 243 143 HOH HOH . M 5 HOH C 44 244 80 HOH HOH . M 5 HOH C 45 245 113 HOH HOH . M 5 HOH C 46 246 103 HOH HOH . M 5 HOH C 47 247 32 HOH HOH . M 5 HOH C 48 248 152 HOH HOH . M 5 HOH C 49 249 121 HOH HOH . M 5 HOH C 50 250 79 HOH HOH . M 5 HOH C 51 251 89 HOH HOH . M 5 HOH C 52 252 95 HOH HOH . M 5 HOH C 53 253 148 HOH HOH . M 5 HOH C 54 254 137 HOH HOH . M 5 HOH C 55 255 78 HOH HOH . M 5 HOH C 56 256 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 -1.421 -7.941 -4.24 1 25.47 ? S SO4 101 A 1 HETATM 2 O O1 SO4 . . . D 2 -0.78 -6.662 -4.82 1 16.88 ? O1 SO4 101 A 1 HETATM 3 O O2 SO4 . . . D 2 -2.74 -8.198 -4.888 1 38.18 ? O2 SO4 101 A 1 HETATM 4 O O3 SO4 . . . D 2 -0.664 -9.196 -4.516 1 44.81 ? O3 SO4 101 A 1 HETATM 5 O O4 SO4 . . . D 2 -1.613 -7.758 -2.74 1 25.03 ? O4 SO4 101 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 63 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #