data_5I6C # _model_server_result.job_id g-GtGxnsMx-rYdA3jj4ZLA _model_server_result.datetime_utc '2025-02-27 13:50:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i6c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 5I6C # _exptl.entry_id 5I6C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 152.111 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description XANTHINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.11 _cell.angle_gamma 90 _cell.entry_id 5I6C _cell.length_a 75.09 _cell.length_b 173.83 _cell.length_c 82.39 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I6C _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 174 A CYS 174 1_555 A SG CYS 185 A CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 B SG CYS 174 B CYS 174 1_555 B SG CYS 185 B CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'C5 H4 N4 O2' _chem_comp.formula_weight 152.111 _chem_comp.id XAN _chem_comp.mon_nstd_flag . _chem_comp.name XANTHINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N9 C4 XAN sing 456 n y N9 C8 XAN sing 457 n y N9 HN9 XAN sing 458 n n C4 N3 XAN sing 459 n y C4 C5 XAN doub 460 n y N3 C2 XAN sing 461 n y N3 HN3 XAN sing 462 n n C2 O2 XAN doub 463 n n C2 N1 XAN sing 464 n y N1 C6 XAN sing 465 n y N1 HN1 XAN sing 466 n n C6 O6 XAN doub 467 n n C6 C5 XAN sing 468 n y C5 N7 XAN sing 469 n y N7 C8 XAN doub 470 n y C8 H8 XAN sing 471 n n # _atom_sites.entry_id 5I6C _atom_sites.fract_transf_matrix[1][1] 0.013317 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005141 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005753 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013011 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XAN A 1 1001 1001 XAN XAN . D 3 LMT A 1 1002 1002 LMT LMT . E 3 LMT A 1 1003 1003 LMT LMT . F 2 XAN B 1 1001 1001 XAN XAN . G 3 LMT B 1 1002 1002 LMT LMT . H 3 LMT B 1 1003 1003 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N9 XAN . . . C 2 -64.447 -17.312 7.182 1 120 ? N9 XAN 1001 A 1 HETATM 2 C C4 XAN . . . C 2 -64.695 -17.799 8.423 1 119.63 ? C4 XAN 1001 A 1 HETATM 3 N N3 XAN . . . C 2 -64.469 -17.299 9.669 1 119.99 ? N3 XAN 1001 A 1 HETATM 4 C C2 XAN . . . C 2 -64.834 -18.026 10.766 1 129.87 ? C2 XAN 1001 A 1 HETATM 5 O O2 XAN . . . C 2 -64.634 -17.583 11.879 1 129.81 ? O2 XAN 1001 A 1 HETATM 6 N N1 XAN . . . C 2 -65.424 -19.251 10.62 1 119.21 ? N1 XAN 1001 A 1 HETATM 7 C C6 XAN . . . C 2 -65.644 -19.745 9.39 1 126.47 ? C6 XAN 1001 A 1 HETATM 8 O O6 XAN . . . C 2 -66.175 -20.833 9.26 1 126.36 ? O6 XAN 1001 A 1 HETATM 9 C C5 XAN . . . C 2 -65.271 -19.004 8.278 1 119.06 ? C5 XAN 1001 A 1 HETATM 10 N N7 XAN . . . C 2 -65.372 -19.252 6.951 1 119.09 ? N7 XAN 1001 A 1 HETATM 11 C C8 XAN . . . C 2 -64.866 -18.215 6.269 1 119.68 ? C8 XAN 1001 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 11 #