data_5I6X # _model_server_result.job_id nuStC8zgETDYzcDc7x5Ovw _model_server_result.datetime_utc '2024-10-13 19:20:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i6x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":702}' # _entry.id 5I6X # _exptl.entry_id 5I6X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5I6X _cell.length_a 129.15 _cell.length_b 162.83 _cell.length_c 140.41 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I6X _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,J,K 1 1 B,C 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -129.15 0 70.205 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 127 A CYS 200 1_555 A SG CYS 136 A CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 22 B CYS 41 1_555 B SG CYS 96 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 134 B CYS 153 1_555 C SG CYS 214 C CYS 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 146 B CYS 165 1_555 B SG CYS 201 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 C SG CYS 23 C CYS 43 1_555 C SG CYS 88 C CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 C SG CYS 134 C CYS 154 1_555 C SG CYS 194 C CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A ND2 ASN 135 A ASN 208 1_555 D C1 NAG . A NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale2 A ND2 ASN 144 A ASN 217 1_555 G C1 NAG . A NAG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.398 ? metalc ? metalc1 A O ALA 23 A ALA 96 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc2 A OD1 ASN 28 A ASN 101 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc3 A O SER 263 A SER 336 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc4 A OG SER 263 A SER 336 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc5 A OD1 ASN 295 A ASN 368 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5I6X _atom_sites.fract_transf_matrix[1][1] 0.007743 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006141 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007122 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG A 1 701 700 NAG NAG . E 5 CLR A 1 702 702 CLR CLR . F 6 LMT A 1 703 705 LMT LMT . G 4 NAG A 1 704 706 NAG NAG . H 7 8PR A 1 705 800 8PR 8PR . I 8 CL A 1 706 901 CL CL . J 9 NA A 1 707 902 NA NA . K 10 HOH A 1 1001 1001 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . E 5 -37.25 4.065 16.765 1 199.34 ? C1 CLR 702 A 1 HETATM 2 C C2 CLR . . . E 5 -37.731 4.431 18.16 1 203.2 ? C2 CLR 702 A 1 HETATM 3 C C3 CLR . . . E 5 -38.057 3.15 18.911 1 209.2 ? C3 CLR 702 A 1 HETATM 4 C C4 CLR . . . E 5 -36.823 2.268 19.017 1 204.76 ? C4 CLR 702 A 1 HETATM 5 C C5 CLR . . . E 5 -36.114 2.129 17.695 1 198.76 ? C5 CLR 702 A 1 HETATM 6 C C6 CLR . . . E 5 -35.641 0.935 17.332 1 199.29 ? C6 CLR 702 A 1 HETATM 7 C C7 CLR . . . E 5 -35.212 0.638 15.919 1 198.51 ? C7 CLR 702 A 1 HETATM 8 C C8 CLR . . . E 5 -34.476 1.842 15.384 1 191.57 ? C8 CLR 702 A 1 HETATM 9 C C9 CLR . . . E 5 -35.418 3.032 15.405 1 200.85 ? C9 CLR 702 A 1 HETATM 10 C C10 CLR . . . E 5 -35.919 3.345 16.825 1 199.58 ? C10 CLR 702 A 1 HETATM 11 C C11 CLR . . . E 5 -34.778 4.244 14.713 1 202.61 ? C11 CLR 702 A 1 HETATM 12 C C12 CLR . . . E 5 -34.109 3.926 13.369 1 200.99 ? C12 CLR 702 A 1 HETATM 13 C C13 CLR . . . E 5 -33.127 2.788 13.531 1 190.3 ? C13 CLR 702 A 1 HETATM 14 C C14 CLR . . . E 5 -33.955 1.613 13.985 1 187.31 ? C14 CLR 702 A 1 HETATM 15 C C15 CLR . . . E 5 -33.074 0.4 13.792 1 185.68 ? C15 CLR 702 A 1 HETATM 16 C C16 CLR . . . E 5 -32.254 0.748 12.56 1 184.8 ? C16 CLR 702 A 1 HETATM 17 C C17 CLR . . . E 5 -32.432 2.236 12.29 1 186.1 ? C17 CLR 702 A 1 HETATM 18 C C18 CLR . . . E 5 -32.104 3.202 14.58 1 190.02 ? C18 CLR 702 A 1 HETATM 19 C C19 CLR . . . E 5 -34.945 4.241 17.562 1 198.34 ? C19 CLR 702 A 1 HETATM 20 C C20 CLR . . . E 5 -31.08 2.846 11.944 1 189.78 ? C20 CLR 702 A 1 HETATM 21 C C21 CLR . . . E 5 -31.233 4.298 11.531 1 200.81 ? C21 CLR 702 A 1 HETATM 22 C C22 CLR . . . E 5 -30.358 2.045 10.868 1 189.95 ? C22 CLR 702 A 1 HETATM 23 C C23 CLR . . . E 5 -29.217 1.237 11.48 1 197.82 ? C23 CLR 702 A 1 HETATM 24 C C24 CLR . . . E 5 -28.999 -0.096 10.766 1 202.85 ? C24 CLR 702 A 1 HETATM 25 C C25 CLR . . . E 5 -27.545 -0.558 10.832 1 202.35 ? C25 CLR 702 A 1 HETATM 26 C C26 CLR . . . E 5 -27.452 -2.079 10.804 1 201.6 ? C26 CLR 702 A 1 HETATM 27 C C27 CLR . . . E 5 -26.722 0.045 9.703 1 201.39 ? C27 CLR 702 A 1 HETATM 28 O O1 CLR . . . E 5 -38.501 3.478 20.228 1 208.18 ? O1 CLR 702 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 28 #