data_5I73 # _model_server_result.job_id 4FRPELcRO8a0wmMyqUsGrA _model_server_result.datetime_utc '2024-11-03 19:24:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i73 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":704}' # _entry.id 5I73 # _exptl.entry_id 5I73 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 198.388 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TETRADECANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5I73 _cell.length_a 129.85 _cell.length_b 163.21 _cell.length_c 140.47 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I73 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,J,K,L,M 1 1 B,C 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 129.85 0 70.235 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 127 A CYS 200 1_555 A SG CYS 136 A CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? disulf ? disulf2 B SG CYS 22 B CYS 41 1_555 B SG CYS 96 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 134 B CYS 153 1_555 C SG CYS 214 C CYS 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 146 B CYS 165 1_555 B SG CYS 201 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 C SG CYS 23 C CYS 43 1_555 C SG CYS 88 C CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 C SG CYS 134 C CYS 154 1_555 C SG CYS 194 C CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A ND2 ASN 135 A ASN 208 1_555 E C1 NAG . A NAG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale2 A ND2 ASN 144 A ASN 217 1_555 I C1 NAG . A NAG 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? metalc ? metalc1 A O GLY 21 A GLY 94 1_555 K NA NA . A NA 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc2 A O ALA 23 A ALA 96 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc3 A O VAL 24 A VAL 97 1_555 K NA NA . A NA 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc4 A OD1 ASN 28 A ASN 101 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc5 A O SER 263 A SER 336 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc6 A OG SER 263 A SER 336 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc7 A OD1 ASN 295 A ASN 368 1_555 J NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? metalc ? metalc8 A O LEU 361 A LEU 434 1_555 K NA NA . A NA 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc9 A OD1 ASP 364 A ASP 437 1_555 K NA NA . A NA 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc10 A OG SER 365 A SER 438 1_555 K NA NA . A NA 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc11 K NA NA . A NA 708 1_555 M O HOH . A HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? # _chem_comp.formula 'C14 H30' _chem_comp.formula_weight 198.388 _chem_comp.id C14 _chem_comp.mon_nstd_flag . _chem_comp.name TETRADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 C14 sing 138 n n C01 H011 C14 sing 139 n n C01 H012 C14 sing 140 n n C01 H013 C14 sing 141 n n C02 C03 C14 sing 142 n n C02 H021 C14 sing 143 n n C02 H022 C14 sing 144 n n C03 C04 C14 sing 145 n n C03 H031 C14 sing 146 n n C03 H032 C14 sing 147 n n C04 C05 C14 sing 148 n n C04 H041 C14 sing 149 n n C04 H042 C14 sing 150 n n C05 C06 C14 sing 151 n n C05 H051 C14 sing 152 n n C05 H052 C14 sing 153 n n C06 C07 C14 sing 154 n n C06 H061 C14 sing 155 n n C06 H062 C14 sing 156 n n C07 C08 C14 sing 157 n n C07 H071 C14 sing 158 n n C07 H072 C14 sing 159 n n C08 C09 C14 sing 160 n n C08 H081 C14 sing 161 n n C08 H082 C14 sing 162 n n C09 C10 C14 sing 163 n n C09 H091 C14 sing 164 n n C09 H092 C14 sing 165 n n C10 C11 C14 sing 166 n n C10 H101 C14 sing 167 n n C10 H102 C14 sing 168 n n C11 C12 C14 sing 169 n n C11 H111 C14 sing 170 n n C11 H112 C14 sing 171 n n C12 C13 C14 sing 172 n n C12 H121 C14 sing 173 n n C12 H122 C14 sing 174 n n C13 C14 C14 sing 175 n n C13 H131 C14 sing 176 n n C13 H132 C14 sing 177 n n C14 H141 C14 sing 178 n n C14 H142 C14 sing 179 n n C14 H143 C14 sing 180 n n # _atom_sites.entry_id 5I73 _atom_sites.fract_transf_matrix[1][1] 0.007701 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006127 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007119 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 68P A 1 701 700 68P LIG . E 5 NAG A 1 702 701 NAG NAG . F 6 CLR A 1 703 702 CLR CLR . G 7 C14 A 1 704 704 C14 C14 . H 4 68P A 1 705 705 68P LIG . I 5 NAG A 1 706 706 NAG NAG . J 8 NA A 1 707 802 NA NA . K 8 NA A 1 708 803 NA NA . L 9 ACA A 1 709 901 ACA ACA . M 10 HOH A 1 1001 1001 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 C14 . . . G 7 32.294 165.905 -5.295 0.5 106.71 ? C01 C14 704 A 1 HETATM 2 C C02 C14 . . . G 7 33.543 165.376 -4.638 0.5 104.04 ? C02 C14 704 A 1 HETATM 3 C C03 C14 . . . G 7 33.334 165.22 -3.144 0.5 108.4 ? C03 C14 704 A 1 HETATM 4 C C04 C14 . . . G 7 34.467 165.88 -2.385 0.5 109.89 ? C04 C14 704 A 1 HETATM 5 C C05 C14 . . . G 7 34.037 166.2 -0.965 0.5 103.71 ? C05 C14 704 A 1 HETATM 6 C C06 C14 . . . G 7 34.474 165.1 -0.014 0.5 103.4 ? C06 C14 704 A 1 HETATM 7 C C07 C14 . . . G 7 34.108 163.724 -0.548 0.5 104.44 ? C07 C14 704 A 1 HETATM 8 C C08 C14 . . . G 7 34.114 162.681 0.565 0.5 104.36 ? C08 C14 704 A 1 HETATM 9 C C09 C14 . . . G 7 34.476 161.305 0.027 0.5 103.32 ? C09 C14 704 A 1 HETATM 10 C C10 C14 . . . G 7 34.033 160.203 0.972 0.5 103.45 ? C10 C14 704 A 1 HETATM 11 C C11 C14 . . . G 7 34.46 160.515 2.394 0.5 109.85 ? C11 C14 704 A 1 HETATM 12 C C12 C14 . . . G 7 33.339 161.204 3.144 0.5 108.37 ? C12 C14 704 A 1 HETATM 13 C C13 C14 . . . G 7 33.54 161.058 4.64 0.5 103.33 ? C13 C14 704 A 1 HETATM 14 C C14 C14 . . . G 7 32.299 160.5 5.288 0.5 106.83 ? C14 C14 704 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 217 _model_server_stats.create_model_time_ms 146 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #