data_5I74 # _model_server_result.job_id SZlqGBVMWf5DPKCJuh5y0g _model_server_result.datetime_utc '2024-11-24 12:08:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":702}' # _entry.id 5I74 # _exptl.entry_id 5I74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5I74 _cell.length_a 129.59 _cell.length_b 164 _cell.length_c 140.17 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I 1 1 B,C 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 129.59 0 70.085 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 127 A CYS 200 1_555 A SG CYS 136 A CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 B SG CYS 22 B CYS 41 1_555 B SG CYS 96 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 134 B CYS 153 1_555 C SG CYS 214 C CYS 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 146 B CYS 165 1_555 B SG CYS 201 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 C SG CYS 23 C CYS 43 1_555 C SG CYS 88 C CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 C SG CYS 134 C CYS 154 1_555 C SG CYS 194 C CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A ND2 ASN 135 A ASN 208 1_555 E C1 NAG . A NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale2 A ND2 ASN 144 A ASN 217 1_555 I C1 NAG . A NAG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 117 n n C1 C10 CLR sing 118 n n C1 H11 CLR sing 119 n n C1 H12 CLR sing 120 n n C2 C3 CLR sing 121 n n C2 H21 CLR sing 122 n n C2 H22 CLR sing 123 n n C3 C4 CLR sing 124 n n C3 O1 CLR sing 125 n n C3 H3 CLR sing 126 n n C4 C5 CLR sing 127 n n C4 H41 CLR sing 128 n n C4 H42 CLR sing 129 n n C5 C6 CLR doub 130 n n C5 C10 CLR sing 131 n n C6 C7 CLR sing 132 n n C6 H6 CLR sing 133 n n C7 C8 CLR sing 134 n n C7 H71 CLR sing 135 n n C7 H72 CLR sing 136 n n C8 C9 CLR sing 137 n n C8 C14 CLR sing 138 n n C8 H8 CLR sing 139 n n C9 C10 CLR sing 140 n n C9 C11 CLR sing 141 n n C9 H9 CLR sing 142 n n C10 C19 CLR sing 143 n n C11 C12 CLR sing 144 n n C11 H111 CLR sing 145 n n C11 H112 CLR sing 146 n n C12 C13 CLR sing 147 n n C12 H121 CLR sing 148 n n C12 H122 CLR sing 149 n n C13 C14 CLR sing 150 n n C13 C17 CLR sing 151 n n C13 C18 CLR sing 152 n n C14 C15 CLR sing 153 n n C14 H14 CLR sing 154 n n C15 C16 CLR sing 155 n n C15 H151 CLR sing 156 n n C15 H152 CLR sing 157 n n C16 C17 CLR sing 158 n n C16 H161 CLR sing 159 n n C16 H162 CLR sing 160 n n C17 C20 CLR sing 161 n n C17 H17 CLR sing 162 n n C18 H181 CLR sing 163 n n C18 H182 CLR sing 164 n n C18 H183 CLR sing 165 n n C19 H191 CLR sing 166 n n C19 H192 CLR sing 167 n n C19 H193 CLR sing 168 n n C20 C21 CLR sing 169 n n C20 C22 CLR sing 170 n n C20 H20 CLR sing 171 n n C21 H211 CLR sing 172 n n C21 H212 CLR sing 173 n n C21 H213 CLR sing 174 n n C22 C23 CLR sing 175 n n C22 H221 CLR sing 176 n n C22 H222 CLR sing 177 n n C23 C24 CLR sing 178 n n C23 H231 CLR sing 179 n n C23 H232 CLR sing 180 n n C24 C25 CLR sing 181 n n C24 H241 CLR sing 182 n n C24 H242 CLR sing 183 n n C25 C26 CLR sing 184 n n C25 C27 CLR sing 185 n n C25 H25 CLR sing 186 n n C26 H261 CLR sing 187 n n C26 H262 CLR sing 188 n n C26 H263 CLR sing 189 n n C27 H271 CLR sing 190 n n C27 H272 CLR sing 191 n n C27 H273 CLR sing 192 n n O1 H1 CLR sing 193 n n # _atom_sites.entry_id 5I74 _atom_sites.fract_transf_matrix[1][1] 0.007717 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006098 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007134 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 69D A 1 700 700 69D BCI . E 5 NAG A 1 701 701 NAG NAG . F 6 CLR A 1 702 702 CLR CLR . G 7 D12 A 1 703 703 D12 D12 . H 8 HEX A 1 704 704 HEX HEX . I 5 NAG A 1 705 705 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . F 6 37.505 160.056 16.698 1 216.93 ? C1 CLR 702 A 1 HETATM 2 C C2 CLR . . . F 6 37.977 159.701 18.1 1 211.07 ? C2 CLR 702 A 1 HETATM 3 C C3 CLR . . . F 6 38.296 160.988 18.843 1 213.8 ? C3 CLR 702 A 1 HETATM 4 C C4 CLR . . . F 6 37.06 161.869 18.936 1 215.2 ? C4 CLR 702 A 1 HETATM 5 C C5 CLR . . . F 6 36.36 161.997 17.608 1 208.01 ? C5 CLR 702 A 1 HETATM 6 C C6 CLR . . . F 6 35.887 163.188 17.234 1 216.08 ? C6 CLR 702 A 1 HETATM 7 C C7 CLR . . . F 6 35.465 163.474 15.816 1 218.77 ? C7 CLR 702 A 1 HETATM 8 C C8 CLR . . . F 6 34.735 162.265 15.285 1 222.57 ? C8 CLR 702 A 1 HETATM 9 C C9 CLR . . . F 6 35.679 161.077 15.32 1 215.85 ? C9 CLR 702 A 1 HETATM 10 C C10 CLR . . . F 6 36.172 160.774 16.745 1 217.97 ? C10 CLR 702 A 1 HETATM 11 C C11 CLR . . . F 6 35.046 159.858 14.633 1 223.3 ? C11 CLR 702 A 1 HETATM 12 C C12 CLR . . . F 6 34.385 160.166 13.282 1 229.18 ? C12 CLR 702 A 1 HETATM 13 C C13 CLR . . . F 6 33.4 161.303 13.43 1 230.9 ? C13 CLR 702 A 1 HETATM 14 C C14 CLR . . . F 6 34.223 162.483 13.881 1 227.09 ? C14 CLR 702 A 1 HETATM 15 C C15 CLR . . . F 6 33.34 163.693 13.675 1 222.22 ? C15 CLR 702 A 1 HETATM 16 C C16 CLR . . . F 6 32.529 163.335 12.439 1 218.03 ? C16 CLR 702 A 1 HETATM 17 C C17 CLR . . . F 6 32.712 161.846 12.181 1 213.73 ? C17 CLR 702 A 1 HETATM 18 C C18 CLR . . . F 6 32.371 160.895 14.476 1 239.35 ? C18 CLR 702 A 1 HETATM 19 C C19 CLR . . . F 6 35.195 159.881 17.482 1 224.8 ? C19 CLR 702 A 1 HETATM 20 C C20 CLR . . . F 6 31.363 161.231 11.83 1 199.01 ? C20 CLR 702 A 1 HETATM 21 C C21 CLR . . . F 6 31.522 159.776 11.428 1 198.72 ? C21 CLR 702 A 1 HETATM 22 C C22 CLR . . . F 6 30.647 162.023 10.744 1 189.15 ? C22 CLR 702 A 1 HETATM 23 C C23 CLR . . . F 6 29.5 162.833 11.344 1 206.22 ? C23 CLR 702 A 1 HETATM 24 C C24 CLR . . . F 6 29.284 164.16 10.619 1 214.65 ? C24 CLR 702 A 1 HETATM 25 C C25 CLR . . . F 6 27.829 164.62 10.672 1 188.77 ? C25 CLR 702 A 1 HETATM 26 C C26 CLR . . . F 6 27.734 166.14 10.633 1 177.14 ? C26 CLR 702 A 1 HETATM 27 C C27 CLR . . . F 6 27.014 164.008 9.543 1 166.65 ? C27 CLR 702 A 1 HETATM 28 O O1 CLR . . . F 6 38.733 160.669 20.165 1 211.64 ? O1 CLR 702 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #