data_5I74 # _model_server_result.job_id 0aXCI8Cd-JWpv7_N3c12_A _model_server_result.datetime_utc '2024-10-13 21:13:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":702}' # _entry.id 5I74 # _exptl.entry_id 5I74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5I74 _cell.length_a 129.59 _cell.length_b 164 _cell.length_c 140.17 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I 1 1 B,C 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 129.59 0 70.085 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 127 A CYS 200 1_555 A SG CYS 136 A CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 B SG CYS 22 B CYS 41 1_555 B SG CYS 96 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 134 B CYS 153 1_555 C SG CYS 214 C CYS 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 146 B CYS 165 1_555 B SG CYS 201 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 C SG CYS 23 C CYS 43 1_555 C SG CYS 88 C CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 C SG CYS 134 C CYS 154 1_555 C SG CYS 194 C CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A ND2 ASN 135 A ASN 208 1_555 E C1 NAG . A NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale2 A ND2 ASN 144 A ASN 217 1_555 I C1 NAG . A NAG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5I74 _atom_sites.fract_transf_matrix[1][1] 0.007717 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006098 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007134 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 69D A 1 700 700 69D BCI . E 5 NAG A 1 701 701 NAG NAG . F 6 CLR A 1 702 702 CLR CLR . G 7 D12 A 1 703 703 D12 D12 . H 8 HEX A 1 704 704 HEX HEX . I 5 NAG A 1 705 705 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . F 6 37.505 160.056 16.698 1 216.93 ? C1 CLR 702 A 1 HETATM 2 C C2 CLR . . . F 6 37.977 159.701 18.1 1 211.07 ? C2 CLR 702 A 1 HETATM 3 C C3 CLR . . . F 6 38.296 160.988 18.843 1 213.8 ? C3 CLR 702 A 1 HETATM 4 C C4 CLR . . . F 6 37.06 161.869 18.936 1 215.2 ? C4 CLR 702 A 1 HETATM 5 C C5 CLR . . . F 6 36.36 161.997 17.608 1 208.01 ? C5 CLR 702 A 1 HETATM 6 C C6 CLR . . . F 6 35.887 163.188 17.234 1 216.08 ? C6 CLR 702 A 1 HETATM 7 C C7 CLR . . . F 6 35.465 163.474 15.816 1 218.77 ? C7 CLR 702 A 1 HETATM 8 C C8 CLR . . . F 6 34.735 162.265 15.285 1 222.57 ? C8 CLR 702 A 1 HETATM 9 C C9 CLR . . . F 6 35.679 161.077 15.32 1 215.85 ? C9 CLR 702 A 1 HETATM 10 C C10 CLR . . . F 6 36.172 160.774 16.745 1 217.97 ? C10 CLR 702 A 1 HETATM 11 C C11 CLR . . . F 6 35.046 159.858 14.633 1 223.3 ? C11 CLR 702 A 1 HETATM 12 C C12 CLR . . . F 6 34.385 160.166 13.282 1 229.18 ? C12 CLR 702 A 1 HETATM 13 C C13 CLR . . . F 6 33.4 161.303 13.43 1 230.9 ? C13 CLR 702 A 1 HETATM 14 C C14 CLR . . . F 6 34.223 162.483 13.881 1 227.09 ? C14 CLR 702 A 1 HETATM 15 C C15 CLR . . . F 6 33.34 163.693 13.675 1 222.22 ? C15 CLR 702 A 1 HETATM 16 C C16 CLR . . . F 6 32.529 163.335 12.439 1 218.03 ? C16 CLR 702 A 1 HETATM 17 C C17 CLR . . . F 6 32.712 161.846 12.181 1 213.73 ? C17 CLR 702 A 1 HETATM 18 C C18 CLR . . . F 6 32.371 160.895 14.476 1 239.35 ? C18 CLR 702 A 1 HETATM 19 C C19 CLR . . . F 6 35.195 159.881 17.482 1 224.8 ? C19 CLR 702 A 1 HETATM 20 C C20 CLR . . . F 6 31.363 161.231 11.83 1 199.01 ? C20 CLR 702 A 1 HETATM 21 C C21 CLR . . . F 6 31.522 159.776 11.428 1 198.72 ? C21 CLR 702 A 1 HETATM 22 C C22 CLR . . . F 6 30.647 162.023 10.744 1 189.15 ? C22 CLR 702 A 1 HETATM 23 C C23 CLR . . . F 6 29.5 162.833 11.344 1 206.22 ? C23 CLR 702 A 1 HETATM 24 C C24 CLR . . . F 6 29.284 164.16 10.619 1 214.65 ? C24 CLR 702 A 1 HETATM 25 C C25 CLR . . . F 6 27.829 164.62 10.672 1 188.77 ? C25 CLR 702 A 1 HETATM 26 C C26 CLR . . . F 6 27.734 166.14 10.633 1 177.14 ? C26 CLR 702 A 1 HETATM 27 C C27 CLR . . . F 6 27.014 164.008 9.543 1 166.65 ? C27 CLR 702 A 1 HETATM 28 O O1 CLR . . . F 6 38.733 160.669 20.165 1 211.64 ? O1 CLR 702 A 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 28 #