data_5I7V # _model_server_result.job_id avaRassfF9DryMFtzwEhRg _model_server_result.datetime_utc '2024-12-02 12:37:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i7v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":302}' # _entry.id 5I7V # _exptl.entry_id 5I7V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.286 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-phenoxy-5-propyl-phenol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5I7V _cell.length_a 69.62 _cell.length_b 111.95 _cell.length_c 262.75 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I7V _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,J,K 1 1,2 C,H,I,L 2 1,3,4,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_465 -x-1,-y+1,z -1 0 0 0 -1 0 0 0 1 -69.62 111.95 0 3 'crystal symmetry operation' 2_365 -x-2,-y+1,z -1 0 0 0 -1 0 0 0 1 -139.24 111.95 0 4 'crystal symmetry operation' 3_355 -x-2,y,-z -1 0 0 0 1 0 0 0 -1 -139.24 0 0 5 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 111.95 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 I N N # _chem_comp.formula 'C15 H16 O2' _chem_comp.formula_weight 228.286 _chem_comp.id PV4 _chem_comp.mon_nstd_flag . _chem_comp.name 2-phenoxy-5-propyl-phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O17 C6 PV4 sing 352 n n C6 C5 PV4 sing 353 n y C6 C1 PV4 doub 354 n y C5 O7 PV4 sing 355 n n C5 C4 PV4 doub 356 n y O7 C8 PV4 sing 357 n n C8 C13 PV4 sing 358 n y C8 C9 PV4 doub 359 n y C13 C12 PV4 doub 360 n y C12 C11 PV4 sing 361 n y C11 C10 PV4 doub 362 n y C10 C9 PV4 sing 363 n y C4 C3 PV4 sing 364 n y C3 C2 PV4 doub 365 n y C2 C1 PV4 sing 366 n y C2 C14 PV4 sing 367 n n C14 C15 PV4 sing 368 n n C15 C16 PV4 sing 369 n n O17 H17 PV4 sing 370 n n C1 H1 PV4 sing 371 n n C4 H4 PV4 sing 372 n n C13 H13 PV4 sing 373 n n C9 H9 PV4 sing 374 n n C12 H12 PV4 sing 375 n n C11 H11 PV4 sing 376 n n C10 H10 PV4 sing 377 n n C3 H3 PV4 sing 378 n n C14 H141 PV4 sing 379 n n C14 H142 PV4 sing 380 n n C15 H151 PV4 sing 381 n n C15 H152 PV4 sing 382 n n C16 H161 PV4 sing 383 n n C16 H162 PV4 sing 384 n n C16 H163 PV4 sing 385 n n # _atom_sites.entry_id 5I7V _atom_sites.fract_transf_matrix[1][1] 0.014364 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008933 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 NAD A 1 301 1 NAD NAD . E 3 PV4 A 1 302 1 PV4 3PP . F 2 NAD B 1 301 1 NAD NAD . G 3 PV4 B 1 302 1 PV4 3PP . H 2 NAD C 1 301 1 NAD NAD . I 3 PV4 C 1 302 1 PV4 3PP . J 4 HOH A 1 401 47 HOH HOH . J 4 HOH A 2 402 87 HOH HOH . J 4 HOH A 3 403 83 HOH HOH . J 4 HOH A 4 404 70 HOH HOH . J 4 HOH A 5 405 30 HOH HOH . J 4 HOH A 6 406 58 HOH HOH . J 4 HOH A 7 407 98 HOH HOH . J 4 HOH A 8 408 107 HOH HOH . J 4 HOH A 9 409 36 HOH HOH . J 4 HOH A 10 410 21 HOH HOH . J 4 HOH A 11 411 46 HOH HOH . J 4 HOH A 12 412 29 HOH HOH . J 4 HOH A 13 413 4 HOH HOH . J 4 HOH A 14 414 1 HOH HOH . J 4 HOH A 15 415 94 HOH HOH . J 4 HOH A 16 416 32 HOH HOH . J 4 HOH A 17 417 38 HOH HOH . J 4 HOH A 18 418 60 HOH HOH . J 4 HOH A 19 419 37 HOH HOH . J 4 HOH A 20 420 63 HOH HOH . J 4 HOH A 21 421 111 HOH HOH . J 4 HOH A 22 422 2 HOH HOH . J 4 HOH A 23 423 5 HOH HOH . J 4 HOH A 24 424 9 HOH HOH . J 4 HOH A 25 425 12 HOH HOH . J 4 HOH A 26 426 93 HOH HOH . J 4 HOH A 27 427 52 HOH HOH . J 4 HOH A 28 428 41 HOH HOH . J 4 HOH A 29 429 3 HOH HOH . J 4 HOH A 30 430 48 HOH HOH . J 4 HOH A 31 431 18 HOH HOH . J 4 HOH A 32 432 13 HOH HOH . J 4 HOH A 33 433 40 HOH HOH . J 4 HOH A 34 434 54 HOH HOH . J 4 HOH A 35 435 81 HOH HOH . J 4 HOH A 36 436 118 HOH HOH . J 4 HOH A 37 437 82 HOH HOH . J 4 HOH A 38 438 76 HOH HOH . J 4 HOH A 39 439 101 HOH HOH . J 4 HOH A 40 440 85 HOH HOH . J 4 HOH A 41 441 57 HOH HOH . J 4 HOH A 42 442 77 HOH HOH . J 4 HOH A 43 443 106 HOH HOH . J 4 HOH A 44 444 75 HOH HOH . J 4 HOH A 45 445 113 HOH HOH . K 4 HOH B 1 401 59 HOH HOH . K 4 HOH B 2 402 31 HOH HOH . K 4 HOH B 3 403 27 HOH HOH . K 4 HOH B 4 404 42 HOH HOH . K 4 HOH B 5 405 11 HOH HOH . K 4 HOH B 6 406 65 HOH HOH . K 4 HOH B 7 407 56 HOH HOH . K 4 HOH B 8 408 74 HOH HOH . K 4 HOH B 9 409 26 HOH HOH . K 4 HOH B 10 410 86 HOH HOH . K 4 HOH B 11 411 22 HOH HOH . K 4 HOH B 12 412 115 HOH HOH . K 4 HOH B 13 413 28 HOH HOH . K 4 HOH B 14 414 103 HOH HOH . K 4 HOH B 15 415 72 HOH HOH . K 4 HOH B 16 416 69 HOH HOH . K 4 HOH B 17 417 25 HOH HOH . K 4 HOH B 18 418 114 HOH HOH . K 4 HOH B 19 419 80 HOH HOH . K 4 HOH B 20 420 24 HOH HOH . K 4 HOH B 21 421 44 HOH HOH . K 4 HOH B 22 422 67 HOH HOH . K 4 HOH B 23 423 8 HOH HOH . K 4 HOH B 24 424 116 HOH HOH . K 4 HOH B 25 425 64 HOH HOH . K 4 HOH B 26 426 104 HOH HOH . K 4 HOH B 27 427 105 HOH HOH . K 4 HOH B 28 428 17 HOH HOH . K 4 HOH B 29 429 88 HOH HOH . K 4 HOH B 30 430 117 HOH HOH . K 4 HOH B 31 431 61 HOH HOH . K 4 HOH B 32 432 102 HOH HOH . K 4 HOH B 33 433 110 HOH HOH . K 4 HOH B 34 434 51 HOH HOH . L 4 HOH C 1 401 16 HOH HOH . L 4 HOH C 2 402 34 HOH HOH . L 4 HOH C 3 403 33 HOH HOH . L 4 HOH C 4 404 84 HOH HOH . L 4 HOH C 5 405 19 HOH HOH . L 4 HOH C 6 406 20 HOH HOH . L 4 HOH C 7 407 14 HOH HOH . L 4 HOH C 8 408 108 HOH HOH . L 4 HOH C 9 409 99 HOH HOH . L 4 HOH C 10 410 43 HOH HOH . L 4 HOH C 11 411 109 HOH HOH . L 4 HOH C 12 412 62 HOH HOH . L 4 HOH C 13 413 96 HOH HOH . L 4 HOH C 14 414 35 HOH HOH . L 4 HOH C 15 415 90 HOH HOH . L 4 HOH C 16 416 6 HOH HOH . L 4 HOH C 17 417 50 HOH HOH . L 4 HOH C 18 418 10 HOH HOH . L 4 HOH C 19 419 15 HOH HOH . L 4 HOH C 20 420 53 HOH HOH . L 4 HOH C 21 421 100 HOH HOH . L 4 HOH C 22 422 112 HOH HOH . L 4 HOH C 23 423 79 HOH HOH . L 4 HOH C 24 424 49 HOH HOH . L 4 HOH C 25 425 45 HOH HOH . L 4 HOH C 26 426 71 HOH HOH . L 4 HOH C 27 427 23 HOH HOH . L 4 HOH C 28 428 66 HOH HOH . L 4 HOH C 29 429 78 HOH HOH . L 4 HOH C 30 430 55 HOH HOH . L 4 HOH C 31 431 7 HOH HOH . L 4 HOH C 32 432 68 HOH HOH . L 4 HOH C 33 433 73 HOH HOH . L 4 HOH C 34 434 95 HOH HOH . L 4 HOH C 35 435 89 HOH HOH . L 4 HOH C 36 436 91 HOH HOH . L 4 HOH C 37 437 39 HOH HOH . L 4 HOH C 38 438 92 HOH HOH . L 4 HOH C 39 439 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O17 PV4 . . . I 3 -59.063 41.315 9.292 1 64.2 ? O17 PV4 302 C 1 HETATM 2 C C6 PV4 . . . I 3 -57.821 41.619 9.805 1 91.7 ? C6 PV4 302 C 1 HETATM 3 C C5 PV4 . . . I 3 -57.204 40.775 10.733 1 104.69 ? C5 PV4 302 C 1 HETATM 4 O O7 PV4 . . . I 3 -57.833 39.651 11.214 1 64.9 ? O7 PV4 302 C 1 HETATM 5 C C8 PV4 . . . I 3 -57.999 38.689 10.244 1 91.8 ? C8 PV4 302 C 1 HETATM 6 C C13 PV4 . . . I 3 -57.652 38.931 8.918 1 48.98 ? C13 PV4 302 C 1 HETATM 7 C C12 PV4 . . . I 3 -57.822 37.959 7.954 1 37.68 ? C12 PV4 302 C 1 HETATM 8 C C11 PV4 . . . I 3 -58.351 36.734 8.335 1 13.75 ? C11 PV4 302 C 1 HETATM 9 C C10 PV4 . . . I 3 -58.7 36.469 9.652 1 20.85 ? C10 PV4 302 C 1 HETATM 10 C C9 PV4 . . . I 3 -58.525 37.451 10.611 1 34.2 ? C9 PV4 302 C 1 HETATM 11 C C4 PV4 . . . I 3 -55.949 41.092 11.241 1 111.32 ? C4 PV4 302 C 1 HETATM 12 C C3 PV4 . . . I 3 -55.318 42.241 10.808 1 93.76 ? C3 PV4 302 C 1 HETATM 13 C C2 PV4 . . . I 3 -55.936 43.063 9.887 1 77.51 ? C2 PV4 302 C 1 HETATM 14 C C1 PV4 . . . I 3 -57.186 42.769 9.368 1 91.69 ? C1 PV4 302 C 1 HETATM 15 C C14 PV4 . . . I 3 -55.258 44.318 9.47 1 37.43 ? C14 PV4 302 C 1 HETATM 16 C C15 PV4 . . . I 3 -54.385 44.043 8.298 1 68.18 ? C15 PV4 302 C 1 HETATM 17 C C16 PV4 . . . I 3 -55.211 44.119 7.063 1 40.25 ? C16 PV4 302 C 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #