data_5I7Y # _model_server_result.job_id 9jEiRMN_e5ByxNC54V3q4A _model_server_result.datetime_utc '2024-11-24 20:41:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i7y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5I7Y # _exptl.entry_id 5I7Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 335.4 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-{6-[(2E)-but-2-en-1-yl]-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-4-yl}-N,N-dimethylbenzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 66.86 _cell.angle_beta 74.85 _cell.angle_gamma 73.56 _cell.entry_id 5I7Y _cell.length_a 24.636 _cell.length_b 33.955 _cell.length_c 39.489 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I7Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H21 N3 O2' _chem_comp.formula_weight 335.4 _chem_comp.id 69G _chem_comp.mon_nstd_flag . _chem_comp.name 3-{6-[(2E)-but-2-en-1-yl]-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-4-yl}-N,N-dimethylbenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 N24 69G sing 1 n n N24 C26 69G sing 2 n n N24 C22 69G sing 3 n n O23 C22 69G doub 4 n n C22 C20 69G sing 5 n n C10 N11 69G sing 6 n y C10 C9 69G doub 7 n y N11 C13 69G sing 8 n y C9 C8 69G sing 9 n y C21 C20 69G doub 10 n y C21 C16 69G sing 11 n y C20 C19 69G sing 12 n y C13 C8 69G doub 13 n y C13 C14 69G sing 14 n n C8 C7 69G sing 15 n n O15 C14 69G doub 16 n n C14 N5 69G sing 17 n n C7 C16 69G sing 18 n n C7 C6 69G doub 19 n n C16 C17 69G doub 20 n y C19 C18 69G doub 21 n y N5 C6 69G sing 22 n n N5 C4 69G sing 23 n n C17 C18 69G sing 24 n y C4 C3 69G sing 25 n n C3 C2 69G doub 26 e n C2 C1 69G sing 27 n n C4 H1 69G sing 28 n n C4 H2 69G sing 29 n n C6 H3 69G sing 30 n n C9 H4 69G sing 31 n n C10 H5 69G sing 32 n n C3 H6 69G sing 33 n n C1 H7 69G sing 34 n n C1 H8 69G sing 35 n n C1 H9 69G sing 36 n n C2 H10 69G sing 37 n n N11 H12 69G sing 38 n n C17 H11 69G sing 39 n n C18 H13 69G sing 40 n n C19 H14 69G sing 41 n n C21 H15 69G sing 42 n n C25 H16 69G sing 43 n n C25 H17 69G sing 44 n n C25 H18 69G sing 45 n n C26 H19 69G sing 46 n n C26 H20 69G sing 47 n n C26 H21 69G sing 48 n n # _atom_sites.entry_id 5I7Y _atom_sites.fract_transf_matrix[1][1] 0.040591 _atom_sites.fract_transf_matrix[1][2] -0.011981 _atom_sites.fract_transf_matrix[1][3] -0.007308 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.030707 _atom_sites.fract_transf_matrix[2][3] -0.011274 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 69G A 1 201 1 69G DRG . C 3 HOH A 1 301 29 HOH HOH . C 3 HOH A 2 302 11 HOH HOH . C 3 HOH A 3 303 113 HOH HOH . C 3 HOH A 4 304 85 HOH HOH . C 3 HOH A 5 305 32 HOH HOH . C 3 HOH A 6 306 44 HOH HOH . C 3 HOH A 7 307 108 HOH HOH . C 3 HOH A 8 308 23 HOH HOH . C 3 HOH A 9 309 13 HOH HOH . C 3 HOH A 10 310 104 HOH HOH . C 3 HOH A 11 311 72 HOH HOH . C 3 HOH A 12 312 17 HOH HOH . C 3 HOH A 13 313 2 HOH HOH . C 3 HOH A 14 314 105 HOH HOH . C 3 HOH A 15 315 6 HOH HOH . C 3 HOH A 16 316 12 HOH HOH . C 3 HOH A 17 317 83 HOH HOH . C 3 HOH A 18 318 5 HOH HOH . C 3 HOH A 19 319 19 HOH HOH . C 3 HOH A 20 320 114 HOH HOH . C 3 HOH A 21 321 81 HOH HOH . C 3 HOH A 22 322 8 HOH HOH . C 3 HOH A 23 323 15 HOH HOH . C 3 HOH A 24 324 98 HOH HOH . C 3 HOH A 25 325 101 HOH HOH . C 3 HOH A 26 326 79 HOH HOH . C 3 HOH A 27 327 47 HOH HOH . C 3 HOH A 28 328 18 HOH HOH . C 3 HOH A 29 329 22 HOH HOH . C 3 HOH A 30 330 35 HOH HOH . C 3 HOH A 31 331 84 HOH HOH . C 3 HOH A 32 332 99 HOH HOH . C 3 HOH A 33 333 76 HOH HOH . C 3 HOH A 34 334 77 HOH HOH . C 3 HOH A 35 335 1 HOH HOH . C 3 HOH A 36 336 34 HOH HOH . C 3 HOH A 37 337 111 HOH HOH . C 3 HOH A 38 338 14 HOH HOH . C 3 HOH A 39 339 93 HOH HOH . C 3 HOH A 40 340 75 HOH HOH . C 3 HOH A 41 341 110 HOH HOH . C 3 HOH A 42 342 7 HOH HOH . C 3 HOH A 43 343 10 HOH HOH . C 3 HOH A 44 344 48 HOH HOH . C 3 HOH A 45 345 73 HOH HOH . C 3 HOH A 46 346 36 HOH HOH . C 3 HOH A 47 347 74 HOH HOH . C 3 HOH A 48 348 89 HOH HOH . C 3 HOH A 49 349 88 HOH HOH . C 3 HOH A 50 350 26 HOH HOH . C 3 HOH A 51 351 90 HOH HOH . C 3 HOH A 52 352 109 HOH HOH . C 3 HOH A 53 353 9 HOH HOH . C 3 HOH A 54 354 46 HOH HOH . C 3 HOH A 55 355 3 HOH HOH . C 3 HOH A 56 356 24 HOH HOH . C 3 HOH A 57 357 38 HOH HOH . C 3 HOH A 58 358 49 HOH HOH . C 3 HOH A 59 359 4 HOH HOH . C 3 HOH A 60 360 80 HOH HOH . C 3 HOH A 61 361 33 HOH HOH . C 3 HOH A 62 362 31 HOH HOH . C 3 HOH A 63 363 21 HOH HOH . C 3 HOH A 64 364 39 HOH HOH . C 3 HOH A 65 365 25 HOH HOH . C 3 HOH A 66 366 87 HOH HOH . C 3 HOH A 67 367 20 HOH HOH . C 3 HOH A 68 368 30 HOH HOH . C 3 HOH A 69 369 94 HOH HOH . C 3 HOH A 70 370 100 HOH HOH . C 3 HOH A 71 371 92 HOH HOH . C 3 HOH A 72 372 97 HOH HOH . C 3 HOH A 73 373 95 HOH HOH . C 3 HOH A 74 374 42 HOH HOH . C 3 HOH A 75 375 103 HOH HOH . C 3 HOH A 76 376 28 HOH HOH . C 3 HOH A 77 377 102 HOH HOH . C 3 HOH A 78 378 86 HOH HOH . C 3 HOH A 79 379 51 HOH HOH . C 3 HOH A 80 380 41 HOH HOH . C 3 HOH A 81 381 40 HOH HOH . C 3 HOH A 82 382 91 HOH HOH . C 3 HOH A 83 383 96 HOH HOH . C 3 HOH A 84 384 37 HOH HOH . C 3 HOH A 85 385 45 HOH HOH . C 3 HOH A 86 386 56 HOH HOH . C 3 HOH A 87 387 106 HOH HOH . C 3 HOH A 88 388 54 HOH HOH . C 3 HOH A 89 389 82 HOH HOH . C 3 HOH A 90 390 112 HOH HOH . C 3 HOH A 91 391 78 HOH HOH . C 3 HOH A 92 392 27 HOH HOH . C 3 HOH A 93 393 43 HOH HOH . C 3 HOH A 94 394 16 HOH HOH . C 3 HOH A 95 395 61 HOH HOH . C 3 HOH A 96 396 107 HOH HOH . C 3 HOH A 97 397 50 HOH HOH . C 3 HOH A 98 398 55 HOH HOH . C 3 HOH A 99 399 62 HOH HOH . C 3 HOH A 100 400 59 HOH HOH . C 3 HOH A 101 401 52 HOH HOH . C 3 HOH A 102 402 70 HOH HOH . C 3 HOH A 103 403 66 HOH HOH . C 3 HOH A 104 404 53 HOH HOH . C 3 HOH A 105 405 68 HOH HOH . C 3 HOH A 106 406 63 HOH HOH . C 3 HOH A 107 407 64 HOH HOH . C 3 HOH A 108 408 57 HOH HOH . C 3 HOH A 109 409 58 HOH HOH . C 3 HOH A 110 410 67 HOH HOH . C 3 HOH A 111 411 69 HOH HOH . C 3 HOH A 112 412 65 HOH HOH . C 3 HOH A 113 413 71 HOH HOH . C 3 HOH A 114 414 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 69G . . . B 2 -19.242 3.235 9.725 1 26.67 ? C4 69G 201 A 1 HETATM 2 C C14 69G . . . B 2 -19.104 4.713 11.639 1 25.17 ? C14 69G 201 A 1 HETATM 3 C C6 69G . . . B 2 -17.319 4.693 10.065 1 25.47 ? C6 69G 201 A 1 HETATM 4 C C7 69G . . . B 2 -16.593 5.624 10.741 1 25.47 ? C7 69G 201 A 1 HETATM 5 C C8 69G . . . B 2 -17.171 6.158 11.986 1 22.98 ? C8 69G 201 A 1 HETATM 6 C C9 69G . . . B 2 -16.753 7.108 12.938 1 32.09 ? C9 69G 201 A 1 HETATM 7 C C10 69G . . . B 2 -17.721 7.188 13.875 1 30.5 ? C10 69G 201 A 1 HETATM 8 C C13 69G . . . B 2 -18.429 5.684 12.4 1 24.92 ? C13 69G 201 A 1 HETATM 9 C C3 69G . . . B 2 -20.112 3.894 8.68 1 27.02 ? C3 69G 201 A 1 HETATM 10 C C1 69G . . . B 2 -21.129 5.834 7.598 1 27.19 ? C1 69G 201 A 1 HETATM 11 C C2 69G . . . B 2 -20.253 5.196 8.644 1 25.49 ? C2 69G 201 A 1 HETATM 12 N N5 69G . . . B 2 -18.532 4.244 10.509 1 24.85 ? N5 69G 201 A 1 HETATM 13 N N11 69G . . . B 2 -18.738 6.337 13.57 1 24.72 ? N11 69G 201 A 1 HETATM 14 O O15 69G . . . B 2 -20.197 4.291 12.002 1 24.21 ? O15 69G 201 A 1 HETATM 15 C C16 69G . . . B 2 -15.28 6.105 10.216 1 26.6 ? C16 69G 201 A 1 HETATM 16 C C17 69G . . . B 2 -14.373 5.196 9.667 1 31.36 ? C17 69G 201 A 1 HETATM 17 C C18 69G . . . B 2 -13.156 5.644 9.177 1 31.67 ? C18 69G 201 A 1 HETATM 18 C C19 69G . . . B 2 -12.834 6.987 9.206 1 38.44 ? C19 69G 201 A 1 HETATM 19 C C20 69G . . . B 2 -13.726 7.913 9.749 1 43 ? C20 69G 201 A 1 HETATM 20 C C21 69G . . . B 2 -14.955 7.462 10.24 1 28.2 ? C21 69G 201 A 1 HETATM 21 C C22 69G . . . B 2 -13.375 9.357 9.797 1 59.15 ? C22 69G 201 A 1 HETATM 22 O O23 69G . . . B 2 -13.168 9.983 8.776 1 42.28 ? O23 69G 201 A 1 HETATM 23 N N24 69G . . . B 2 -13.257 9.997 10.981 1 44.29 ? N24 69G 201 A 1 HETATM 24 C C25 69G . . . B 2 -12.901 11.417 11 1 58.12 ? C25 69G 201 A 1 HETATM 25 C C26 69G . . . B 2 -13.479 9.297 12.25 1 38.99 ? C26 69G 201 A 1 HETATM 26 H H12 69G . . . B 2 -19.547 6.212 14.091 1 29.67 ? H12 69G 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #