data_5I8E # _model_server_result.job_id 6r-Huv7Rgd6OgIDKQnAT4g _model_server_result.datetime_utc '2024-11-27 01:33:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i8e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":301}' # _entry.id 5I8E # _exptl.entry_id 5I8E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5I8E _cell.length_a 114.606 _cell.length_b 114.606 _cell.length_c 174.082 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I8E _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,O,P 1 1 C,D,J,K,L,M,N,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 149 A CYS 140 1_555 A SG CYS 205 A CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 22 B CYS 23 1_555 B SG CYS 87 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? disulf ? disulf4 B SG CYS 133 B CYS 134 1_555 B SG CYS 193 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 C SG CYS 22 C CYS 22 1_555 C SG CYS 96 C CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf6 C SG CYS 149 C CYS 140 1_555 C SG CYS 205 C CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 D SG CYS 22 D CYS 23 1_555 D SG CYS 87 D CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf8 D SG CYS 133 D CYS 134 1_555 D SG CYS 193 D CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc1 A OE1 GLU 105 A GLU 100 1_555 G ZN ZN . A ZN 303 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc2 A OE2 GLU 105 A GLU 100 1_555 G ZN ZN . A ZN 303 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc3 A NE2 HIS 173 A HIS 164 1_555 H ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc4 F ZN ZN . A ZN 302 1_555 O O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.852 ? metalc ? metalc5 F ZN ZN . A ZN 302 1_555 Q O HOH . C HOH 414 4_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc6 G ZN ZN . A ZN 303 1_555 B OE2 GLU 31 B GLU 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.804 ? metalc ? metalc7 G ZN ZN . A ZN 303 3_655 B NE2 HIS 69 B HIS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.867 ? metalc ? metalc8 H ZN ZN . A ZN 304 1_555 B OD1 ASN 136 B ASN 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc9 H ZN ZN . A ZN 304 1_555 B ND2 ASN 137 B ASN 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc10 O O HOH . A HOH 403 3_655 K ZN ZN . C ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc11 O O HOH . A HOH 412 3_655 K ZN ZN . C ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc12 B N ILE 1 B ILE 2 1_555 I ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc13 C NE2 HIS 54 C HIS 53 1_555 K ZN ZN . C ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc14 C OE1 GLU 105 C GLU 100 1_555 L ZN ZN . C ZN 303 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc15 C OE2 GLU 105 C GLU 100 1_555 L ZN ZN . C ZN 303 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc16 C NE2 HIS 173 C HIS 164 1_555 M ZN ZN . C ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc17 K ZN ZN . C ZN 302 1_555 Q O HOH . C HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc18 L ZN ZN . C ZN 303 1_555 D OE2 GLU 31 D GLU 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc19 L ZN ZN . C ZN 303 4_565 D NE2 HIS 69 D HIS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? metalc ? metalc20 M ZN ZN . C ZN 304 1_555 D ND2 ASN 136 D ASN 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc21 M ZN ZN . C ZN 304 1_555 D OD1 ASN 137 D ASN 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5I8E _atom_sites.fract_transf_matrix[1][1] 0.008726 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008726 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005744 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 301 1 ZN ZN . F 3 ZN A 1 302 2 ZN ZN . G 3 ZN A 1 303 3 ZN ZN . H 3 ZN A 1 304 4 ZN ZN . I 3 ZN B 1 301 9 ZN ZN . J 3 ZN C 1 301 5 ZN ZN . K 3 ZN C 1 302 6 ZN ZN . L 3 ZN C 1 303 7 ZN ZN . M 3 ZN C 1 304 8 ZN ZN . N 3 ZN D 1 301 10 ZN ZN . O 4 HOH A 1 401 60 HOH HOH . O 4 HOH A 2 402 43 HOH HOH . O 4 HOH A 3 403 38 HOH HOH . O 4 HOH A 4 404 81 HOH HOH . O 4 HOH A 5 405 13 HOH HOH . O 4 HOH A 6 406 12 HOH HOH . O 4 HOH A 7 407 15 HOH HOH . O 4 HOH A 8 408 99 HOH HOH . O 4 HOH A 9 409 119 HOH HOH . O 4 HOH A 10 410 22 HOH HOH . O 4 HOH A 11 411 91 HOH HOH . O 4 HOH A 12 412 32 HOH HOH . O 4 HOH A 13 413 7 HOH HOH . O 4 HOH A 14 414 33 HOH HOH . O 4 HOH A 15 415 85 HOH HOH . O 4 HOH A 16 416 87 HOH HOH . O 4 HOH A 17 417 63 HOH HOH . O 4 HOH A 18 418 28 HOH HOH . O 4 HOH A 19 419 129 HOH HOH . O 4 HOH A 20 420 86 HOH HOH . O 4 HOH A 21 421 23 HOH HOH . O 4 HOH A 22 422 36 HOH HOH . O 4 HOH A 23 423 93 HOH HOH . O 4 HOH A 24 424 82 HOH HOH . O 4 HOH A 25 425 79 HOH HOH . O 4 HOH A 26 426 70 HOH HOH . O 4 HOH A 27 427 80 HOH HOH . O 4 HOH A 28 428 118 HOH HOH . O 4 HOH A 29 429 94 HOH HOH . O 4 HOH A 30 430 128 HOH HOH . O 4 HOH A 31 431 95 HOH HOH . O 4 HOH A 32 432 120 HOH HOH . O 4 HOH A 33 433 78 HOH HOH . P 4 HOH B 1 401 48 HOH HOH . P 4 HOH B 2 402 11 HOH HOH . P 4 HOH B 3 403 17 HOH HOH . P 4 HOH B 4 404 98 HOH HOH . P 4 HOH B 5 405 5 HOH HOH . P 4 HOH B 6 406 8 HOH HOH . P 4 HOH B 7 407 83 HOH HOH . P 4 HOH B 8 408 35 HOH HOH . P 4 HOH B 9 409 51 HOH HOH . P 4 HOH B 10 410 71 HOH HOH . P 4 HOH B 11 411 84 HOH HOH . P 4 HOH B 12 412 96 HOH HOH . P 4 HOH B 13 413 53 HOH HOH . P 4 HOH B 14 414 6 HOH HOH . P 4 HOH B 15 415 21 HOH HOH . P 4 HOH B 16 416 66 HOH HOH . P 4 HOH B 17 417 49 HOH HOH . P 4 HOH B 18 418 34 HOH HOH . P 4 HOH B 19 419 9 HOH HOH . P 4 HOH B 20 420 122 HOH HOH . P 4 HOH B 21 421 121 HOH HOH . P 4 HOH B 22 422 14 HOH HOH . P 4 HOH B 23 423 88 HOH HOH . P 4 HOH B 24 424 124 HOH HOH . P 4 HOH B 25 425 42 HOH HOH . P 4 HOH B 26 426 20 HOH HOH . P 4 HOH B 27 427 97 HOH HOH . P 4 HOH B 28 428 61 HOH HOH . P 4 HOH B 29 429 125 HOH HOH . P 4 HOH B 30 430 29 HOH HOH . P 4 HOH B 31 431 126 HOH HOH . Q 4 HOH C 1 401 45 HOH HOH . Q 4 HOH C 2 402 55 HOH HOH . Q 4 HOH C 3 403 67 HOH HOH . Q 4 HOH C 4 404 65 HOH HOH . Q 4 HOH C 5 405 40 HOH HOH . Q 4 HOH C 6 406 103 HOH HOH . Q 4 HOH C 7 407 19 HOH HOH . Q 4 HOH C 8 408 100 HOH HOH . Q 4 HOH C 9 409 105 HOH HOH . Q 4 HOH C 10 410 74 HOH HOH . Q 4 HOH C 11 411 26 HOH HOH . Q 4 HOH C 12 412 133 HOH HOH . Q 4 HOH C 13 413 57 HOH HOH . Q 4 HOH C 14 414 50 HOH HOH . Q 4 HOH C 15 415 25 HOH HOH . Q 4 HOH C 16 416 52 HOH HOH . Q 4 HOH C 17 417 101 HOH HOH . Q 4 HOH C 18 418 16 HOH HOH . Q 4 HOH C 19 419 117 HOH HOH . Q 4 HOH C 20 420 90 HOH HOH . Q 4 HOH C 21 421 106 HOH HOH . Q 4 HOH C 22 422 54 HOH HOH . Q 4 HOH C 23 423 89 HOH HOH . Q 4 HOH C 24 424 31 HOH HOH . Q 4 HOH C 25 425 108 HOH HOH . Q 4 HOH C 26 426 64 HOH HOH . Q 4 HOH C 27 427 27 HOH HOH . Q 4 HOH C 28 428 127 HOH HOH . Q 4 HOH C 29 429 58 HOH HOH . Q 4 HOH C 30 430 109 HOH HOH . Q 4 HOH C 31 431 102 HOH HOH . R 4 HOH D 1 401 2 HOH HOH . R 4 HOH D 2 402 1 HOH HOH . R 4 HOH D 3 403 68 HOH HOH . R 4 HOH D 4 404 30 HOH HOH . R 4 HOH D 5 405 111 HOH HOH . R 4 HOH D 6 406 47 HOH HOH . R 4 HOH D 7 407 56 HOH HOH . R 4 HOH D 8 408 4 HOH HOH . R 4 HOH D 9 409 24 HOH HOH . R 4 HOH D 10 410 10 HOH HOH . R 4 HOH D 11 411 3 HOH HOH . R 4 HOH D 12 412 18 HOH HOH . R 4 HOH D 13 413 92 HOH HOH . R 4 HOH D 14 414 113 HOH HOH . R 4 HOH D 15 415 112 HOH HOH . R 4 HOH D 16 416 130 HOH HOH . R 4 HOH D 17 417 123 HOH HOH . R 4 HOH D 18 418 75 HOH HOH . R 4 HOH D 19 419 41 HOH HOH . R 4 HOH D 20 420 110 HOH HOH . R 4 HOH D 21 421 62 HOH HOH . R 4 HOH D 22 422 131 HOH HOH . R 4 HOH D 23 423 107 HOH HOH . R 4 HOH D 24 424 72 HOH HOH . R 4 HOH D 25 425 116 HOH HOH . R 4 HOH D 26 426 115 HOH HOH . R 4 HOH D 27 427 73 HOH HOH . R 4 HOH D 28 428 39 HOH HOH . R 4 HOH D 29 429 114 HOH HOH . R 4 HOH D 30 430 132 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 3 _atom_site.Cartn_x 37.687 _atom_site.Cartn_y 68.343 _atom_site.Cartn_z 20.296 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 94.89 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #