data_5I9K # _model_server_result.job_id SJQqyhDSMQGF00zEnfJp3g _model_server_result.datetime_utc '2024-11-17 17:44:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5i9k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5I9K # _exptl.entry_id 5I9K _exptl.method 'ELECTRON CRYSTALLOGRAPHY' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5I9K _cell.length_a 81.8 _cell.length_b 81.8 _cell.length_c 100 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I9K _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 81.8 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 40.9 70.840878 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5I9K _atom_sites.fract_transf_matrix[1][1] 0.012225 _atom_sites.fract_transf_matrix[1][2] 0.007058 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014116 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GSH A 1 201 200 GSH GTT . C 3 PC1 A 1 202 300 PC1 PC2 . D 3 PC1 A 1 203 400 PC1 PC2 . E 4 PLM A 1 204 500 PLM PLM . F 4 PLM A 1 205 700 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . B 2 41.846 28.279 11.384 1 16.99 ? N1 GSH 201 A 1 HETATM 2 C CA1 GSH . . . B 2 40.902 29.035 12.25 1 18.51 ? CA1 GSH 201 A 1 HETATM 3 C C1 GSH . . . B 2 39.595 29.149 11.494 1 18.31 ? C1 GSH 201 A 1 HETATM 4 O O11 GSH . . . B 2 39.579 28.833 10.207 1 17.64 ? O11 GSH 201 A 1 HETATM 5 O O12 GSH . . . B 2 38.545 29.508 12.067 1 16.28 ? O12 GSH 201 A 1 HETATM 6 C CB1 GSH . . . B 2 41.532 30.413 12.572 1 19.26 ? CB1 GSH 201 A 1 HETATM 7 C CG1 GSH . . . B 2 40.693 31.124 13.628 1 20 ? CG1 GSH 201 A 1 HETATM 8 C CD1 GSH . . . B 2 41.397 32.303 14.258 1 20 ? CD1 GSH 201 A 1 HETATM 9 O OE1 GSH . . . B 2 42.732 32.408 14.313 1 20 ? OE1 GSH 201 A 1 HETATM 10 N N2 GSH . . . B 2 40.605 33.224 14.775 1 20 ? N2 GSH 201 A 1 HETATM 11 C CA2 GSH . . . B 2 41.113 34.524 15.212 1 20 ? CA2 GSH 201 A 1 HETATM 12 C C2 GSH . . . B 2 40.674 34.738 16.656 1 20 ? C2 GSH 201 A 1 HETATM 13 O O2 GSH . . . B 2 40.612 35.981 17.154 1 20 ? O2 GSH 201 A 1 HETATM 14 C CB2 GSH . . . B 2 40.557 35.633 14.323 1 20 ? CB2 GSH 201 A 1 HETATM 15 S SG2 GSH . . . B 2 40.78 35.354 12.57 1 20 ? SG2 GSH 201 A 1 HETATM 16 N N3 GSH . . . B 2 40.382 33.609 17.348 1 20 ? N3 GSH 201 A 1 HETATM 17 C CA3 GSH . . . B 2 39.86 33.633 18.728 1 20 ? CA3 GSH 201 A 1 HETATM 18 C C3 GSH . . . B 2 40.929 33.249 19.764 1 20 ? C3 GSH 201 A 1 HETATM 19 O O31 GSH . . . B 2 42.129 33.134 19.414 1 20 ? O31 GSH 201 A 1 HETATM 20 O O32 GSH . . . B 2 40.568 33.076 21.009 1 20 ? O32 GSH 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 26 _model_server_stats.element_count 20 #