data_5IA4 # _model_server_result.job_id Fc8yYbnBPkEbhvizG9OG6A _model_server_result.datetime_utc '2024-11-24 04:05:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ia4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 5IA4 # _exptl.entry_id 5IA4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'Ligand ID 88Z: foretinib' _entity.formula_weight 632.654 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description "N-(3-fluoro-4-{[6-methoxy-7-(3-morpholin-4-ylpropoxy)quinolin-4-yl]oxy}phenyl)-N'-(4-fluorophenyl)cyclopropane-1,1-dicarboxamide" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec 2.7.10.1 # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5IA4 _cell.length_a 80.769 _cell.length_b 104.482 _cell.length_c 34.536 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IA4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C34 H34 F2 N4 O6' _chem_comp.formula_weight 632.654 _chem_comp.id 88Z _chem_comp.mon_nstd_flag . _chem_comp.name "N-(3-fluoro-4-{[6-methoxy-7-(3-morpholin-4-ylpropoxy)quinolin-4-yl]oxy}phenyl)-N'-(4-fluorophenyl)cyclopropane-1,1-dicarboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 88Z doub 1 n y C1 C6 88Z sing 2 n y C1 O11 88Z sing 3 n n C3 C2 88Z sing 4 n y O13 C2 88Z sing 5 n n C3 C4 88Z doub 6 n y C3 H3 88Z sing 7 n n N7 C4 88Z sing 8 n y C4 C5 88Z sing 9 n y C5 C10 88Z sing 10 n y C5 C6 88Z doub 11 n y C6 H6 88Z sing 12 n n C8 N7 88Z doub 13 n y C8 C9 88Z sing 14 n y C8 H8 88Z sing 15 n n C9 C10 88Z doub 16 n y C9 H9 88Z sing 17 n n C10 O14 88Z sing 18 n n O11 C12 88Z sing 19 n n C12 H12 88Z sing 20 n n C12 H12A 88Z sing 21 n n C12 H12B 88Z sing 22 n n O13 C23 88Z sing 23 n n C15 O14 88Z sing 24 n n C16 C15 88Z doub 25 n y C15 C20 88Z sing 26 n y C17 C16 88Z sing 27 n y C16 H16 88Z sing 28 n n C17 C18 88Z doub 29 n y C17 H17 88Z sing 30 n n N22 C18 88Z sing 31 n n C18 C19 88Z sing 32 n y C19 C20 88Z doub 33 n y C19 H19 88Z sing 34 n n C20 F21 88Z sing 35 n n N22 C32 88Z sing 36 n n N22 HN22 88Z sing 37 n n C23 C24 88Z sing 38 n n C23 H23 88Z sing 39 n n C23 H23A 88Z sing 40 n n C25 C24 88Z sing 41 n n C24 H24 88Z sing 42 n n C24 H24A 88Z sing 43 n n N26 C25 88Z sing 44 n n C25 H25 88Z sing 45 n n C25 H25A 88Z sing 46 n n C27 N26 88Z sing 47 n n N26 C31 88Z sing 48 n n C28 C27 88Z sing 49 n n C27 H27 88Z sing 50 n n C27 H27A 88Z sing 51 n n C28 O29 88Z sing 52 n n C28 H28 88Z sing 53 n n C28 H28A 88Z sing 54 n n O29 C30 88Z sing 55 n n C30 C31 88Z sing 56 n n C30 H30 88Z sing 57 n n C30 H30A 88Z sing 58 n n C31 H31 88Z sing 59 n n C31 H31A 88Z sing 60 n n C33 C32 88Z sing 61 n n C32 O36 88Z doub 62 n n C34 C33 88Z sing 63 n n C33 C45 88Z sing 64 n n C33 C46 88Z sing 65 n n N35 C34 88Z sing 66 n n O37 C34 88Z doub 67 n n C38 N35 88Z sing 68 n n N35 HN35 88Z sing 69 n n C43 C38 88Z doub 70 n y C39 C38 88Z sing 71 n y C40 C39 88Z doub 72 n y C39 H39 88Z sing 73 n n C41 C40 88Z sing 74 n y C40 H40 88Z sing 75 n n F44 C41 88Z sing 76 n n C41 C42 88Z doub 77 n y C42 C43 88Z sing 78 n y C42 H42 88Z sing 79 n n C43 H43 88Z sing 80 n n C45 C46 88Z sing 81 n n C45 H45 88Z sing 82 n n C45 H45A 88Z sing 83 n n C46 H46 88Z sing 84 n n C46 H46A 88Z sing 85 n n # _atom_sites.entry_id 5IA4 _atom_sites.fract_transf_matrix[1][1] 0.012381 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009571 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028955 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 88Z A 1 1001 1001 88Z 88Z . C 3 EDO A 1 1002 2001 EDO EDO . D 4 HOH A 1 1101 87 HOH HOH . D 4 HOH A 2 1102 98 HOH HOH . D 4 HOH A 3 1103 94 HOH HOH . D 4 HOH A 4 1104 32 HOH HOH . D 4 HOH A 5 1105 3 HOH HOH . D 4 HOH A 6 1106 129 HOH HOH . D 4 HOH A 7 1107 69 HOH HOH . D 4 HOH A 8 1108 25 HOH HOH . D 4 HOH A 9 1109 53 HOH HOH . D 4 HOH A 10 1110 23 HOH HOH . D 4 HOH A 11 1111 77 HOH HOH . D 4 HOH A 12 1112 70 HOH HOH . D 4 HOH A 13 1113 42 HOH HOH . D 4 HOH A 14 1114 39 HOH HOH . D 4 HOH A 15 1115 99 HOH HOH . D 4 HOH A 16 1116 73 HOH HOH . D 4 HOH A 17 1117 2 HOH HOH . D 4 HOH A 18 1118 34 HOH HOH . D 4 HOH A 19 1119 29 HOH HOH . D 4 HOH A 20 1120 84 HOH HOH . D 4 HOH A 21 1121 27 HOH HOH . D 4 HOH A 22 1122 24 HOH HOH . D 4 HOH A 23 1123 131 HOH HOH . D 4 HOH A 24 1124 33 HOH HOH . D 4 HOH A 25 1125 28 HOH HOH . D 4 HOH A 26 1126 21 HOH HOH . D 4 HOH A 27 1127 30 HOH HOH . D 4 HOH A 28 1128 14 HOH HOH . D 4 HOH A 29 1129 26 HOH HOH . D 4 HOH A 30 1130 121 HOH HOH . D 4 HOH A 31 1131 58 HOH HOH . D 4 HOH A 32 1132 13 HOH HOH . D 4 HOH A 33 1133 19 HOH HOH . D 4 HOH A 34 1134 44 HOH HOH . D 4 HOH A 35 1135 31 HOH HOH . D 4 HOH A 36 1136 90 HOH HOH . D 4 HOH A 37 1137 97 HOH HOH . D 4 HOH A 38 1138 7 HOH HOH . D 4 HOH A 39 1139 50 HOH HOH . D 4 HOH A 40 1140 43 HOH HOH . D 4 HOH A 41 1141 5 HOH HOH . D 4 HOH A 42 1142 8 HOH HOH . D 4 HOH A 43 1143 40 HOH HOH . D 4 HOH A 44 1144 35 HOH HOH . D 4 HOH A 45 1145 11 HOH HOH . D 4 HOH A 46 1146 45 HOH HOH . D 4 HOH A 47 1147 82 HOH HOH . D 4 HOH A 48 1148 17 HOH HOH . D 4 HOH A 49 1149 130 HOH HOH . D 4 HOH A 50 1150 60 HOH HOH . D 4 HOH A 51 1151 4 HOH HOH . D 4 HOH A 52 1152 1 HOH HOH . D 4 HOH A 53 1153 36 HOH HOH . D 4 HOH A 54 1154 46 HOH HOH . D 4 HOH A 55 1155 93 HOH HOH . D 4 HOH A 56 1156 22 HOH HOH . D 4 HOH A 57 1157 59 HOH HOH . D 4 HOH A 58 1158 12 HOH HOH . D 4 HOH A 59 1159 66 HOH HOH . D 4 HOH A 60 1160 64 HOH HOH . D 4 HOH A 61 1161 100 HOH HOH . D 4 HOH A 62 1162 20 HOH HOH . D 4 HOH A 63 1163 86 HOH HOH . D 4 HOH A 64 1164 9 HOH HOH . D 4 HOH A 65 1165 47 HOH HOH . D 4 HOH A 66 1166 89 HOH HOH . D 4 HOH A 67 1167 85 HOH HOH . D 4 HOH A 68 1168 16 HOH HOH . D 4 HOH A 69 1169 10 HOH HOH . D 4 HOH A 70 1170 61 HOH HOH . D 4 HOH A 71 1171 56 HOH HOH . D 4 HOH A 72 1172 79 HOH HOH . D 4 HOH A 73 1173 96 HOH HOH . D 4 HOH A 74 1174 15 HOH HOH . D 4 HOH A 75 1175 6 HOH HOH . D 4 HOH A 76 1176 54 HOH HOH . D 4 HOH A 77 1177 81 HOH HOH . D 4 HOH A 78 1178 68 HOH HOH . D 4 HOH A 79 1179 57 HOH HOH . D 4 HOH A 80 1180 105 HOH HOH . D 4 HOH A 81 1181 88 HOH HOH . D 4 HOH A 82 1182 49 HOH HOH . D 4 HOH A 83 1183 113 HOH HOH . D 4 HOH A 84 1184 37 HOH HOH . D 4 HOH A 85 1185 51 HOH HOH . D 4 HOH A 86 1186 78 HOH HOH . D 4 HOH A 87 1187 118 HOH HOH . D 4 HOH A 88 1188 63 HOH HOH . D 4 HOH A 89 1189 123 HOH HOH . D 4 HOH A 90 1190 101 HOH HOH . D 4 HOH A 91 1191 41 HOH HOH . D 4 HOH A 92 1192 95 HOH HOH . D 4 HOH A 93 1193 62 HOH HOH . D 4 HOH A 94 1194 126 HOH HOH . D 4 HOH A 95 1195 106 HOH HOH . D 4 HOH A 96 1196 48 HOH HOH . D 4 HOH A 97 1197 71 HOH HOH . D 4 HOH A 98 1198 52 HOH HOH . D 4 HOH A 99 1199 117 HOH HOH . D 4 HOH A 100 1200 67 HOH HOH . D 4 HOH A 101 1201 76 HOH HOH . D 4 HOH A 102 1202 107 HOH HOH . D 4 HOH A 103 1203 72 HOH HOH . D 4 HOH A 104 1204 104 HOH HOH . D 4 HOH A 105 1205 111 HOH HOH . D 4 HOH A 106 1206 74 HOH HOH . D 4 HOH A 107 1207 109 HOH HOH . D 4 HOH A 108 1208 122 HOH HOH . D 4 HOH A 109 1209 80 HOH HOH . D 4 HOH A 110 1210 18 HOH HOH . D 4 HOH A 111 1211 124 HOH HOH . D 4 HOH A 112 1212 55 HOH HOH . D 4 HOH A 113 1213 38 HOH HOH . D 4 HOH A 114 1214 103 HOH HOH . D 4 HOH A 115 1215 65 HOH HOH . D 4 HOH A 116 1216 102 HOH HOH . D 4 HOH A 117 1217 91 HOH HOH . D 4 HOH A 118 1218 83 HOH HOH . D 4 HOH A 119 1219 112 HOH HOH . D 4 HOH A 120 1220 108 HOH HOH . D 4 HOH A 121 1221 114 HOH HOH . D 4 HOH A 122 1222 119 HOH HOH . D 4 HOH A 123 1223 125 HOH HOH . D 4 HOH A 124 1224 120 HOH HOH . D 4 HOH A 125 1225 116 HOH HOH . D 4 HOH A 126 1226 75 HOH HOH . D 4 HOH A 127 1227 115 HOH HOH . D 4 HOH A 128 1228 92 HOH HOH . D 4 HOH A 129 1229 127 HOH HOH . D 4 HOH A 130 1230 110 HOH HOH . D 4 HOH A 131 1231 128 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 88Z . . . B 2 15.184 -4.989 99.978 1 30.34 ? C1 88Z 1001 A 1 HETATM 2 C C2 88Z . . . B 2 13.828 -4.768 100.159 1 31.87 ? C2 88Z 1001 A 1 HETATM 3 C C3 88Z . . . B 2 13.168 -5.176 101.312 1 28.56 ? C3 88Z 1001 A 1 HETATM 4 C C4 88Z . . . B 2 13.92 -5.826 102.292 1 30.07 ? C4 88Z 1001 A 1 HETATM 5 C C5 88Z . . . B 2 15.296 -6.046 102.129 1 26.71 ? C5 88Z 1001 A 1 HETATM 6 C C6 88Z . . . B 2 15.947 -5.635 100.957 1 25.77 ? C6 88Z 1001 A 1 HETATM 7 N N7 88Z . . . B 2 13.279 -6.221 103.397 1 25.27 ? N7 88Z 1001 A 1 HETATM 8 C C8 88Z . . . B 2 13.991 -6.868 104.417 1 28.43 ? C8 88Z 1001 A 1 HETATM 9 C C9 88Z . . . B 2 15.364 -7.108 104.299 1 24.66 ? C9 88Z 1001 A 1 HETATM 10 C C10 88Z . . . B 2 16.027 -6.69 103.144 1 26.56 ? C10 88Z 1001 A 1 HETATM 11 O O11 88Z . . . B 2 15.665 -4.534 98.792 1 33.41 ? O11 88Z 1001 A 1 HETATM 12 C C12 88Z . . . B 2 17.046 -4.779 98.501 1 31.97 ? C12 88Z 1001 A 1 HETATM 13 O O13 88Z . . . B 2 13.215 -4.125 99.13 1 33.89 ? O13 88Z 1001 A 1 HETATM 14 O O14 88Z . . . B 2 17.374 -6.897 102.918 1 28.12 ? O14 88Z 1001 A 1 HETATM 15 C C15 88Z . . . B 2 18.143 -7.098 104.054 1 27.49 ? C15 88Z 1001 A 1 HETATM 16 C C16 88Z . . . B 2 18.461 -6.089 104.945 1 27.32 ? C16 88Z 1001 A 1 HETATM 17 C C17 88Z . . . B 2 19.216 -6.358 106.08 1 25.58 ? C17 88Z 1001 A 1 HETATM 18 C C18 88Z . . . B 2 19.703 -7.644 106.354 1 27.1 ? C18 88Z 1001 A 1 HETATM 19 C C19 88Z . . . B 2 19.381 -8.669 105.445 1 28.58 ? C19 88Z 1001 A 1 HETATM 20 C C20 88Z . . . B 2 18.611 -8.388 104.3 1 28.27 ? C20 88Z 1001 A 1 HETATM 21 F F21 88Z . . . B 2 18.277 -9.356 103.405 1 34.6 ? F21 88Z 1001 A 1 HETATM 22 N N22 88Z . . . B 2 20.423 -7.77 107.496 1 29.23 ? N22 88Z 1001 A 1 HETATM 23 C C23 88Z . . . B 2 11.785 -3.973 99.27 1 31.71 ? C23 88Z 1001 A 1 HETATM 24 C C24 88Z . . . B 2 11.288 -3.405 97.936 1 36.63 ? C24 88Z 1001 A 1 HETATM 25 C C25 88Z . . . B 2 11.734 -1.936 97.875 1 41.86 ? C25 88Z 1001 A 1 HETATM 26 N N26 88Z . . . B 2 11.25 -1.264 96.66 1 53.49 ? N26 88Z 1001 A 1 HETATM 27 C C27 88Z . . . B 2 12.137 -1.534 95.518 1 49.59 ? C27 88Z 1001 A 1 HETATM 28 C C28 88Z . . . B 2 11.64 -0.785 94.28 1 55.88 ? C28 88Z 1001 A 1 HETATM 29 O O29 88Z . . . B 2 11.623 0.627 94.558 1 56.38 ? O29 88Z 1001 A 1 HETATM 30 C C30 88Z . . . B 2 10.705 0.9 95.629 1 54.65 ? C30 88Z 1001 A 1 HETATM 31 C C31 88Z . . . B 2 11.182 0.185 96.893 1 57.04 ? C31 88Z 1001 A 1 HETATM 32 C C32 88Z . . . B 2 21.353 -8.737 107.698 1 31.36 ? C32 88Z 1001 A 1 HETATM 33 C C33 88Z . . . B 2 22.047 -8.732 109.07 1 32.54 ? C33 88Z 1001 A 1 HETATM 34 C C34 88Z . . . B 2 21.538 -7.676 110.084 1 32.35 ? C34 88Z 1001 A 1 HETATM 35 N N35 88Z . . . B 2 22.098 -7.766 111.322 1 28.3 ? N35 88Z 1001 A 1 HETATM 36 O O36 88Z . . . B 2 21.696 -9.569 106.863 1 33.36 ? O36 88Z 1001 A 1 HETATM 37 O O37 88Z . . . B 2 20.68 -6.833 109.764 1 26.5 ? O37 88Z 1001 A 1 HETATM 38 C C38 88Z . . . B 2 21.739 -6.894 112.286 1 27.5 ? C38 88Z 1001 A 1 HETATM 39 C C39 88Z . . . B 2 20.404 -6.584 112.538 1 28.43 ? C39 88Z 1001 A 1 HETATM 40 C C40 88Z . . . B 2 20.033 -5.678 113.523 1 30.79 ? C40 88Z 1001 A 1 HETATM 41 C C41 88Z . . . B 2 21.016 -5.091 114.291 1 35.69 ? C41 88Z 1001 A 1 HETATM 42 C C42 88Z . . . B 2 22.354 -5.413 114.069 1 29.56 ? C42 88Z 1001 A 1 HETATM 43 C C43 88Z . . . B 2 22.722 -6.309 113.074 1 30.97 ? C43 88Z 1001 A 1 HETATM 44 F F44 88Z . . . B 2 20.638 -4.178 115.282 1 36.68 ? F44 88Z 1001 A 1 HETATM 45 C C45 88Z . . . B 2 23.539 -9.145 109.076 1 28.9 ? C45 88Z 1001 A 1 HETATM 46 C C46 88Z . . . B 2 22.472 -10.098 109.633 1 28.47 ? C46 88Z 1001 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 46 #