data_5IA9
#
_model_server_result.job_id            proWo1egLCrkumglDjB8Sg 
_model_server_result.datetime_utc      '2025-03-04 14:23:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ia9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    5IA9 
#
_exptl.entry_id    5IA9 
_exptl.method      'ELECTRON CRYSTALLOGRAPHY' 
#
_entity.details                     ? 
_entity.formula_weight              790.145 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5IA9 
_cell.length_a            81.8 
_cell.length_b            81.8 
_cell.length_c            100 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5IA9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        168 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 6' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 81.8 0 0 
3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 40.9 70.840878 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C44 H88 N O8 P' 
_chem_comp.formula_weight    790.145 
_chem_comp.id                PC1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3-SN-PHOSPHATIDYLCHOLINE 
#
_atom_sites.entry_id                     5IA9 
_atom_sites.fract_transf_matrix[1][1]    0.012225 
_atom_sites.fract_transf_matrix[1][2]    0.007058 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014116 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GTD A 1 201 200 GTD GTD . 
C 3 PC1 A 1 202 300 PC1 PC2 . 
D 3 PC1 A 1 203 400 PC1 PC2 . 
E 4 PLM A 1 204 500 PLM PLM . 
F 4 PLM A 1 205 700 PLM PLM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O12 PC1 . . . D 3 14.99 23.23 19.458 1 20 ? O12 PC1 203 A 1 
HETATM 2 P P PC1 . . . D 3 15.789 22.812 18.236 1 20 ? P PC1 203 A 1 
HETATM 3 O O14 PC1 . . . D 3 16.238 21.363 18.114 1 20 ? O14 PC1 203 A 1 
HETATM 4 O O13 PC1 . . . D 3 17.178 23.678 18.278 1 20 ? O13 PC1 203 A 1 
HETATM 5 C C11 PC1 . . . D 3 17.292 25.082 18.004 1 20 ? C11 PC1 203 A 1 
HETATM 6 C C12 PC1 . . . D 3 18.551 25.605 18.694 1 20 ? C12 PC1 203 A 1 
HETATM 7 N N PC1 . . . D 3 18.384 26.098 20.096 1 20 ? N PC1 203 A 1 
HETATM 8 C C13 PC1 . . . D 3 19.734 26.208 20.712 1 20 ? C13 PC1 203 A 1 
HETATM 9 C C14 PC1 . . . D 3 17.557 25.206 20.938 1 20 ? C14 PC1 203 A 1 
HETATM 10 C C15 PC1 . . . D 3 17.786 27.457 20.116 1 20 ? C15 PC1 203 A 1 
HETATM 11 O O11 PC1 . . . D 3 15.009 23.336 16.872 1 20 ? O11 PC1 203 A 1 
HETATM 12 C C1 PC1 . . . D 3 14.263 22.536 15.913 1 20 ? C1 PC1 203 A 1 
HETATM 13 C C2 PC1 . . . D 3 14.032 23.213 14.53 1 20 ? C2 PC1 203 A 1 
HETATM 14 O O21 PC1 . . . D 3 15.128 22.917 13.625 1 20 ? O21 PC1 203 A 1 
HETATM 15 C C21 PC1 . . . D 3 15.561 24.11 12.888 1 20 ? C21 PC1 203 A 1 
HETATM 16 O O22 PC1 . . . D 3 15.767 25.144 13.525 1 20 ? O22 PC1 203 A 1 
HETATM 17 C C22 PC1 . . . D 3 15.73 24.094 11.373 1 20 ? C22 PC1 203 A 1 
HETATM 18 C C23 PC1 . . . D 3 15.567 25.514 10.812 1 20 ? C23 PC1 203 A 1 
HETATM 19 C C24 PC1 . . . D 3 14.542 25.56 9.673 1 20 ? C24 PC1 203 A 1 
HETATM 20 C C25 PC1 . . . D 3 14.793 26.806 8.818 1 20 ? C25 PC1 203 A 1 
HETATM 21 C C26 PC1 . . . D 3 13.832 26.892 7.613 1 20 ? C26 PC1 203 A 1 
HETATM 22 C C27 PC1 . . . D 3 14.134 28.079 6.682 1 20 ? C27 PC1 203 A 1 
HETATM 23 C C28 PC1 . . . D 3 14.536 27.568 5.29 1 20 ? C28 PC1 203 A 1 
HETATM 24 C C29 PC1 . . . D 3 13.353 27 4.454 1 20 ? C29 PC1 203 A 1 
HETATM 25 C C2A PC1 . . . D 3 13.739 26.992 2.961 1 20 ? C2A PC1 203 A 1 
HETATM 26 C C2B PC1 . . . D 3 12.536 26.873 2.015 1 20 ? C2B PC1 203 A 1 
HETATM 27 C C2C PC1 . . . D 3 11.743 28.181 1.892 1 20 ? C2C PC1 203 A 1 
HETATM 28 C C2D PC1 . . . D 3 11.597 28.734 0.461 1 20 ? C2D PC1 203 A 1 
HETATM 29 C C2E PC1 . . . D 3 12.836 28.953 -0.425 1 20 ? C2E PC1 203 A 1 
HETATM 30 C C2F PC1 . . . D 3 12.281 29.039 -1.846 1 20 ? C2F PC1 203 A 1 
HETATM 31 C C2G PC1 . . . D 3 13.213 29.635 -2.889 1 20 ? C2G PC1 203 A 1 
HETATM 32 C C2H PC1 . . . D 3 12.466 29.615 -4.23 1 20 ? C2H PC1 203 A 1 
HETATM 33 C C2I PC1 . . . D 3 13.336 29.192 -5.402 1 20 ? C2I PC1 203 A 1 
HETATM 34 C C3 PC1 . . . D 3 12.688 22.82 13.866 1 20 ? C3 PC1 203 A 1 
HETATM 35 O O31 PC1 . . . D 3 11.761 23.937 13.789 1 20 ? O31 PC1 203 A 1 
HETATM 36 C C31 PC1 . . . D 3 10.299 23.824 13.544 1 20 ? C31 PC1 203 A 1 
HETATM 37 O O32 PC1 . . . D 3 9.58 23.778 14.529 1 20 ? O32 PC1 203 A 1 
HETATM 38 C C32 PC1 . . . D 3 9.701 23.765 12.127 1 20 ? C32 PC1 203 A 1 
HETATM 39 C C33 PC1 . . . D 3 8.169 23.946 12.015 1 20 ? C33 PC1 203 A 1 
HETATM 40 C C34 PC1 . . . D 3 7.709 23.865 10.545 1 20 ? C34 PC1 203 A 1 
HETATM 41 C C35 PC1 . . . D 3 6.199 23.845 10.227 1 18.5 ? C35 PC1 203 A 1 
HETATM 42 C C36 PC1 . . . D 3 5.916 24.997 9.24 1 17 ? C36 PC1 203 A 1 
HETATM 43 C C37 PC1 . . . D 3 5.05 24.809 7.973 1 16.65 ? C37 PC1 203 A 1 
HETATM 44 C C38 PC1 . . . D 3 5.77 25.001 6.625 1 16.29 ? C38 PC1 203 A 1 
HETATM 45 C C39 PC1 . . . D 3 5.299 25.668 5.459 1 15.94 ? C39 PC1 203 A 1 
HETATM 46 C C3A PC1 . . . D 3 6.162 25.089 4.381 1 16.56 ? C3A PC1 203 A 1 
HETATM 47 C C3B PC1 . . . D 3 5.504 25.714 3.117 1 15.38 ? C3B PC1 203 A 1 
HETATM 48 C C3C PC1 . . . D 3 5.831 25.077 1.944 1 16 ? C3C PC1 203 A 1 
HETATM 49 C C3D PC1 . . . D 3 4.664 25.408 1.157 1 15.79 ? C3D PC1 203 A 1 
HETATM 50 C C3E PC1 . . . D 3 5.31 25.609 -0.218 1 16.53 ? C3E PC1 203 A 1 
HETATM 51 C C3F PC1 . . . D 3 4.337 24.744 -0.905 1 18.2 ? C3F PC1 203 A 1 
HETATM 52 C C3G PC1 . . . D 3 4.815 24.569 -2.339 1 18.98 ? C3G PC1 203 A 1 
HETATM 53 C C3H PC1 . . . D 3 6.362 24.566 -2.56 1 18.3 ? C3H PC1 203 A 1 
HETATM 54 C C3I PC1 . . . D 3 7.015 25.614 -3.431 1 17.05 ? C3I PC1 203 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           54 
#