data_5IAJ # _model_server_result.job_id jC58HfYgjOqJ6Rl8P0GwIw _model_server_result.datetime_utc '2024-10-20 00:24:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5iaj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 5IAJ # _exptl.entry_id 5IAJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5IAJ _cell.length_a 69.375 _cell.length_b 84.871 _cell.length_c 96.564 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IAJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 161 A GLN 161 1_555 C NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc2 A O TRP 206 A TRP 206 1_555 C NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? covale ? covale1 B C ACE 1 B ACE 1 1_555 B N ASP 2 B ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 B C ASP 5 B ASP 5 1_555 B C1 0QE 6 B 0QE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.517 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5IAJ _atom_sites.fract_transf_matrix[1][1] 0.014414 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011783 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010356 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA A 1 301 1 NA NA . D 4 HOH A 1 401 103 HOH HOH . D 4 HOH A 2 402 193 HOH HOH . D 4 HOH A 3 403 191 HOH HOH . D 4 HOH A 4 404 30 HOH HOH . D 4 HOH A 5 405 153 HOH HOH . D 4 HOH A 6 406 116 HOH HOH . D 4 HOH A 7 407 150 HOH HOH . D 4 HOH A 8 408 64 HOH HOH . D 4 HOH A 9 409 168 HOH HOH . D 4 HOH A 10 410 29 HOH HOH . D 4 HOH A 11 411 102 HOH HOH . D 4 HOH A 12 412 69 HOH HOH . D 4 HOH A 13 413 57 HOH HOH . D 4 HOH A 14 414 179 HOH HOH . D 4 HOH A 15 415 101 HOH HOH . D 4 HOH A 16 416 105 HOH HOH . D 4 HOH A 17 417 76 HOH HOH . D 4 HOH A 18 418 171 HOH HOH . D 4 HOH A 19 419 184 HOH HOH . D 4 HOH A 20 420 25 HOH HOH . D 4 HOH A 21 421 97 HOH HOH . D 4 HOH A 22 422 63 HOH HOH . D 4 HOH A 23 423 144 HOH HOH . D 4 HOH A 24 424 136 HOH HOH . D 4 HOH A 25 425 177 HOH HOH . D 4 HOH A 26 426 12 HOH HOH . D 4 HOH A 27 427 147 HOH HOH . D 4 HOH A 28 428 114 HOH HOH . D 4 HOH A 29 429 73 HOH HOH . D 4 HOH A 30 430 117 HOH HOH . D 4 HOH A 31 431 49 HOH HOH . D 4 HOH A 32 432 13 HOH HOH . D 4 HOH A 33 433 87 HOH HOH . D 4 HOH A 34 434 2 HOH HOH . D 4 HOH A 35 435 188 HOH HOH . D 4 HOH A 36 436 130 HOH HOH . D 4 HOH A 37 437 123 HOH HOH . D 4 HOH A 38 438 62 HOH HOH . D 4 HOH A 39 439 9 HOH HOH . D 4 HOH A 40 440 75 HOH HOH . D 4 HOH A 41 441 54 HOH HOH . D 4 HOH A 42 442 5 HOH HOH . D 4 HOH A 43 443 99 HOH HOH . D 4 HOH A 44 444 134 HOH HOH . D 4 HOH A 45 445 149 HOH HOH . D 4 HOH A 46 446 192 HOH HOH . D 4 HOH A 47 447 183 HOH HOH . D 4 HOH A 48 448 112 HOH HOH . D 4 HOH A 49 449 52 HOH HOH . D 4 HOH A 50 450 164 HOH HOH . D 4 HOH A 51 451 68 HOH HOH . D 4 HOH A 52 452 95 HOH HOH . D 4 HOH A 53 453 3 HOH HOH . D 4 HOH A 54 454 127 HOH HOH . D 4 HOH A 55 455 88 HOH HOH . D 4 HOH A 56 456 85 HOH HOH . D 4 HOH A 57 457 47 HOH HOH . D 4 HOH A 58 458 122 HOH HOH . D 4 HOH A 59 459 51 HOH HOH . D 4 HOH A 60 460 152 HOH HOH . D 4 HOH A 61 461 19 HOH HOH . D 4 HOH A 62 462 111 HOH HOH . D 4 HOH A 63 463 131 HOH HOH . D 4 HOH A 64 464 61 HOH HOH . D 4 HOH A 65 465 15 HOH HOH . D 4 HOH A 66 466 1 HOH HOH . D 4 HOH A 67 467 36 HOH HOH . D 4 HOH A 68 468 80 HOH HOH . D 4 HOH A 69 469 4 HOH HOH . D 4 HOH A 70 470 108 HOH HOH . D 4 HOH A 71 471 135 HOH HOH . D 4 HOH A 72 472 190 HOH HOH . D 4 HOH A 73 473 104 HOH HOH . D 4 HOH A 74 474 186 HOH HOH . D 4 HOH A 75 475 60 HOH HOH . D 4 HOH A 76 476 23 HOH HOH . D 4 HOH A 77 477 22 HOH HOH . D 4 HOH A 78 478 38 HOH HOH . D 4 HOH A 79 479 55 HOH HOH . D 4 HOH A 80 480 141 HOH HOH . D 4 HOH A 81 481 189 HOH HOH . D 4 HOH A 82 482 107 HOH HOH . D 4 HOH A 83 483 20 HOH HOH . D 4 HOH A 84 484 10 HOH HOH . D 4 HOH A 85 485 21 HOH HOH . D 4 HOH A 86 486 98 HOH HOH . D 4 HOH A 87 487 24 HOH HOH . D 4 HOH A 88 488 27 HOH HOH . D 4 HOH A 89 489 187 HOH HOH . D 4 HOH A 90 490 163 HOH HOH . D 4 HOH A 91 491 35 HOH HOH . D 4 HOH A 92 492 172 HOH HOH . D 4 HOH A 93 493 66 HOH HOH . D 4 HOH A 94 494 16 HOH HOH . D 4 HOH A 95 495 110 HOH HOH . D 4 HOH A 96 496 155 HOH HOH . D 4 HOH A 97 497 133 HOH HOH . D 4 HOH A 98 498 113 HOH HOH . D 4 HOH A 99 499 94 HOH HOH . D 4 HOH A 100 500 46 HOH HOH . D 4 HOH A 101 501 86 HOH HOH . D 4 HOH A 102 502 14 HOH HOH . D 4 HOH A 103 503 121 HOH HOH . D 4 HOH A 104 504 72 HOH HOH . D 4 HOH A 105 505 40 HOH HOH . D 4 HOH A 106 506 129 HOH HOH . D 4 HOH A 107 507 151 HOH HOH . D 4 HOH A 108 508 44 HOH HOH . D 4 HOH A 109 509 6 HOH HOH . D 4 HOH A 110 510 100 HOH HOH . D 4 HOH A 111 511 67 HOH HOH . D 4 HOH A 112 512 8 HOH HOH . D 4 HOH A 113 513 45 HOH HOH . D 4 HOH A 114 514 11 HOH HOH . D 4 HOH A 115 515 142 HOH HOH . D 4 HOH A 116 516 79 HOH HOH . D 4 HOH A 117 517 158 HOH HOH . D 4 HOH A 118 518 159 HOH HOH . D 4 HOH A 119 519 138 HOH HOH . D 4 HOH A 120 520 96 HOH HOH . D 4 HOH A 121 521 26 HOH HOH . D 4 HOH A 122 522 118 HOH HOH . D 4 HOH A 123 523 7 HOH HOH . D 4 HOH A 124 524 71 HOH HOH . D 4 HOH A 125 525 82 HOH HOH . D 4 HOH A 126 526 148 HOH HOH . D 4 HOH A 127 527 93 HOH HOH . D 4 HOH A 128 528 91 HOH HOH . D 4 HOH A 129 529 77 HOH HOH . D 4 HOH A 130 530 42 HOH HOH . D 4 HOH A 131 531 162 HOH HOH . D 4 HOH A 132 532 31 HOH HOH . D 4 HOH A 133 533 70 HOH HOH . D 4 HOH A 134 534 160 HOH HOH . D 4 HOH A 135 535 124 HOH HOH . D 4 HOH A 136 536 28 HOH HOH . D 4 HOH A 137 537 174 HOH HOH . D 4 HOH A 138 538 84 HOH HOH . D 4 HOH A 139 539 37 HOH HOH . D 4 HOH A 140 540 48 HOH HOH . D 4 HOH A 141 541 17 HOH HOH . D 4 HOH A 142 542 109 HOH HOH . D 4 HOH A 143 543 182 HOH HOH . D 4 HOH A 144 544 58 HOH HOH . D 4 HOH A 145 545 157 HOH HOH . D 4 HOH A 146 546 74 HOH HOH . D 4 HOH A 147 547 39 HOH HOH . D 4 HOH A 148 548 146 HOH HOH . D 4 HOH A 149 549 194 HOH HOH . D 4 HOH A 150 550 167 HOH HOH . D 4 HOH A 151 551 43 HOH HOH . D 4 HOH A 152 552 137 HOH HOH . D 4 HOH A 153 553 132 HOH HOH . D 4 HOH A 154 554 106 HOH HOH . D 4 HOH A 155 555 173 HOH HOH . D 4 HOH A 156 556 161 HOH HOH . D 4 HOH A 157 557 145 HOH HOH . D 4 HOH A 158 558 18 HOH HOH . D 4 HOH A 159 559 32 HOH HOH . D 4 HOH A 160 560 92 HOH HOH . D 4 HOH A 161 561 78 HOH HOH . D 4 HOH A 162 562 115 HOH HOH . D 4 HOH A 163 563 90 HOH HOH . D 4 HOH A 164 564 165 HOH HOH . D 4 HOH A 165 565 83 HOH HOH . D 4 HOH A 166 566 154 HOH HOH . D 4 HOH A 167 567 33 HOH HOH . D 4 HOH A 168 568 128 HOH HOH . D 4 HOH A 169 569 180 HOH HOH . D 4 HOH A 170 570 53 HOH HOH . D 4 HOH A 171 571 65 HOH HOH . D 4 HOH A 172 572 34 HOH HOH . D 4 HOH A 173 573 59 HOH HOH . D 4 HOH A 174 574 140 HOH HOH . D 4 HOH A 175 575 178 HOH HOH . D 4 HOH A 176 576 170 HOH HOH . D 4 HOH A 177 577 175 HOH HOH . D 4 HOH A 178 578 156 HOH HOH . D 4 HOH A 179 579 81 HOH HOH . D 4 HOH A 180 580 185 HOH HOH . D 4 HOH A 181 581 120 HOH HOH . D 4 HOH A 182 582 139 HOH HOH . D 4 HOH A 183 583 119 HOH HOH . D 4 HOH A 184 584 89 HOH HOH . D 4 HOH A 185 585 176 HOH HOH . D 4 HOH A 186 586 56 HOH HOH . D 4 HOH A 187 587 181 HOH HOH . D 4 HOH A 188 588 166 HOH HOH . E 4 HOH B 1 101 195 HOH HOH . E 4 HOH B 2 102 41 HOH HOH . E 4 HOH B 3 103 169 HOH HOH . E 4 HOH B 4 104 125 HOH HOH . E 4 HOH B 5 105 196 HOH HOH . E 4 HOH B 6 106 126 HOH HOH . E 4 HOH B 7 107 143 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 2.517 _atom_site.Cartn_y -17.228 _atom_site.Cartn_z -16.39 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.37 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 1 #