data_5IAR
#
_model_server_result.job_id            pBLxh08IlHJRuMPC0pukSg 
_model_server_result.datetime_utc      '2024-11-05 05:37:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5iar 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":101}' 
#
_entry.id    5IAR 
#
_exptl.entry_id    5IAR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.251 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2,3-DIHYDROXY-1,4-DITHIOBUTANE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5IAR 
_cell.length_a            68.871 
_cell.length_b            84.628 
_cell.length_c            96.237 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5IAR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLN 161 A GLN 161 1_555 C NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? 
metalc ? metalc2 A OG SER 205 A SER 205 1_555 C NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.17 ? 
metalc ? metalc3 A O TRP 206 A TRP 206 1_555 C NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? 
covale ? covale1 B C ACE 1 B ACE 1 1_555 B N ASP 2 B ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 B C ASP 5 B ASP 5 1_555 B C1 0QE 6 B 0QE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.507 ? 
covale ? covale3 B O ASP 5 B ASP 5 1_555 D S1 DTT . B DTT 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.486 ? 
#
_chem_comp.formula           'C4 H10 O2 S2' 
_chem_comp.formula_weight    154.251 
_chem_comp.id                DTT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2,3-DIHYDROXY-1,4-DITHIOBUTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1,4-DITHIOTHREITOL 
#
_atom_sites.entry_id                     5IAR 
_atom_sites.fract_transf_matrix[1][1]    0.01452 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011816 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010391 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NA A 1 301 1 NA NA . 
D 4 DTT B 1 101 573 DTT DTT . 
E 5 HOH A 1 401 215 HOH HOH . 
E 5 HOH A 2 402 32 HOH HOH . 
E 5 HOH A 3 403 88 HOH HOH . 
E 5 HOH A 4 404 186 HOH HOH . 
E 5 HOH A 5 405 46 HOH HOH . 
E 5 HOH A 6 406 78 HOH HOH . 
E 5 HOH A 7 407 199 HOH HOH . 
E 5 HOH A 8 408 174 HOH HOH . 
E 5 HOH A 9 409 80 HOH HOH . 
E 5 HOH A 10 410 150 HOH HOH . 
E 5 HOH A 11 411 160 HOH HOH . 
E 5 HOH A 12 412 37 HOH HOH . 
E 5 HOH A 13 413 11 HOH HOH . 
E 5 HOH A 14 414 175 HOH HOH . 
E 5 HOH A 15 415 91 HOH HOH . 
E 5 HOH A 16 416 178 HOH HOH . 
E 5 HOH A 17 417 98 HOH HOH . 
E 5 HOH A 18 418 182 HOH HOH . 
E 5 HOH A 19 419 62 HOH HOH . 
E 5 HOH A 20 420 77 HOH HOH . 
E 5 HOH A 21 421 7 HOH HOH . 
E 5 HOH A 22 422 60 HOH HOH . 
E 5 HOH A 23 423 83 HOH HOH . 
E 5 HOH A 24 424 100 HOH HOH . 
E 5 HOH A 25 425 70 HOH HOH . 
E 5 HOH A 26 426 125 HOH HOH . 
E 5 HOH A 27 427 140 HOH HOH . 
E 5 HOH A 28 428 202 HOH HOH . 
E 5 HOH A 29 429 95 HOH HOH . 
E 5 HOH A 30 430 201 HOH HOH . 
E 5 HOH A 31 431 16 HOH HOH . 
E 5 HOH A 32 432 31 HOH HOH . 
E 5 HOH A 33 433 108 HOH HOH . 
E 5 HOH A 34 434 13 HOH HOH . 
E 5 HOH A 35 435 79 HOH HOH . 
E 5 HOH A 36 436 145 HOH HOH . 
E 5 HOH A 37 437 17 HOH HOH . 
E 5 HOH A 38 438 56 HOH HOH . 
E 5 HOH A 39 439 8 HOH HOH . 
E 5 HOH A 40 440 33 HOH HOH . 
E 5 HOH A 41 441 15 HOH HOH . 
E 5 HOH A 42 442 4 HOH HOH . 
E 5 HOH A 43 443 12 HOH HOH . 
E 5 HOH A 44 444 76 HOH HOH . 
E 5 HOH A 45 445 92 HOH HOH . 
E 5 HOH A 46 446 3 HOH HOH . 
E 5 HOH A 47 447 154 HOH HOH . 
E 5 HOH A 48 448 35 HOH HOH . 
E 5 HOH A 49 449 87 HOH HOH . 
E 5 HOH A 50 450 45 HOH HOH . 
E 5 HOH A 51 451 55 HOH HOH . 
E 5 HOH A 52 452 195 HOH HOH . 
E 5 HOH A 53 453 104 HOH HOH . 
E 5 HOH A 54 454 169 HOH HOH . 
E 5 HOH A 55 455 189 HOH HOH . 
E 5 HOH A 56 456 90 HOH HOH . 
E 5 HOH A 57 457 26 HOH HOH . 
E 5 HOH A 58 458 24 HOH HOH . 
E 5 HOH A 59 459 6 HOH HOH . 
E 5 HOH A 60 460 28 HOH HOH . 
E 5 HOH A 61 461 180 HOH HOH . 
E 5 HOH A 62 462 57 HOH HOH . 
E 5 HOH A 63 463 124 HOH HOH . 
E 5 HOH A 64 464 71 HOH HOH . 
E 5 HOH A 65 465 181 HOH HOH . 
E 5 HOH A 66 466 105 HOH HOH . 
E 5 HOH A 67 467 20 HOH HOH . 
E 5 HOH A 68 468 63 HOH HOH . 
E 5 HOH A 69 469 29 HOH HOH . 
E 5 HOH A 70 470 38 HOH HOH . 
E 5 HOH A 71 471 61 HOH HOH . 
E 5 HOH A 72 472 128 HOH HOH . 
E 5 HOH A 73 473 93 HOH HOH . 
E 5 HOH A 74 474 82 HOH HOH . 
E 5 HOH A 75 475 50 HOH HOH . 
E 5 HOH A 76 476 22 HOH HOH . 
E 5 HOH A 77 477 48 HOH HOH . 
E 5 HOH A 78 478 157 HOH HOH . 
E 5 HOH A 79 479 143 HOH HOH . 
E 5 HOH A 80 480 5 HOH HOH . 
E 5 HOH A 81 481 170 HOH HOH . 
E 5 HOH A 82 482 44 HOH HOH . 
E 5 HOH A 83 483 19 HOH HOH . 
E 5 HOH A 84 484 30 HOH HOH . 
E 5 HOH A 85 485 109 HOH HOH . 
E 5 HOH A 86 486 75 HOH HOH . 
E 5 HOH A 87 487 121 HOH HOH . 
E 5 HOH A 88 488 21 HOH HOH . 
E 5 HOH A 89 489 18 HOH HOH . 
E 5 HOH A 90 490 167 HOH HOH . 
E 5 HOH A 91 491 72 HOH HOH . 
E 5 HOH A 92 492 49 HOH HOH . 
E 5 HOH A 93 493 190 HOH HOH . 
E 5 HOH A 94 494 159 HOH HOH . 
E 5 HOH A 95 495 173 HOH HOH . 
E 5 HOH A 96 496 39 HOH HOH . 
E 5 HOH A 97 497 216 HOH HOH . 
E 5 HOH A 98 498 25 HOH HOH . 
E 5 HOH A 99 499 9 HOH HOH . 
E 5 HOH A 100 500 85 HOH HOH . 
E 5 HOH A 101 501 107 HOH HOH . 
E 5 HOH A 102 502 47 HOH HOH . 
E 5 HOH A 103 503 135 HOH HOH . 
E 5 HOH A 104 504 86 HOH HOH . 
E 5 HOH A 105 505 81 HOH HOH . 
E 5 HOH A 106 506 68 HOH HOH . 
E 5 HOH A 107 507 123 HOH HOH . 
E 5 HOH A 108 508 101 HOH HOH . 
E 5 HOH A 109 509 10 HOH HOH . 
E 5 HOH A 110 510 59 HOH HOH . 
E 5 HOH A 111 511 209 HOH HOH . 
E 5 HOH A 112 512 219 HOH HOH . 
E 5 HOH A 113 513 127 HOH HOH . 
E 5 HOH A 114 514 51 HOH HOH . 
E 5 HOH A 115 515 162 HOH HOH . 
E 5 HOH A 116 516 172 HOH HOH . 
E 5 HOH A 117 517 208 HOH HOH . 
E 5 HOH A 118 518 53 HOH HOH . 
E 5 HOH A 119 519 52 HOH HOH . 
E 5 HOH A 120 520 211 HOH HOH . 
E 5 HOH A 121 521 171 HOH HOH . 
E 5 HOH A 122 522 217 HOH HOH . 
E 5 HOH A 123 523 66 HOH HOH . 
E 5 HOH A 124 524 73 HOH HOH . 
E 5 HOH A 125 525 200 HOH HOH . 
E 5 HOH A 126 526 129 HOH HOH . 
E 5 HOH A 127 527 163 HOH HOH . 
E 5 HOH A 128 528 89 HOH HOH . 
E 5 HOH A 129 529 225 HOH HOH . 
E 5 HOH A 130 530 136 HOH HOH . 
E 5 HOH A 131 531 161 HOH HOH . 
E 5 HOH A 132 532 58 HOH HOH . 
E 5 HOH A 133 533 119 HOH HOH . 
E 5 HOH A 134 534 67 HOH HOH . 
E 5 HOH A 135 535 179 HOH HOH . 
E 5 HOH A 136 536 213 HOH HOH . 
E 5 HOH A 137 537 42 HOH HOH . 
E 5 HOH A 138 538 122 HOH HOH . 
E 5 HOH A 139 539 36 HOH HOH . 
E 5 HOH A 140 540 210 HOH HOH . 
E 5 HOH A 141 541 106 HOH HOH . 
E 5 HOH A 142 542 158 HOH HOH . 
E 5 HOH A 143 543 192 HOH HOH . 
E 5 HOH A 144 544 147 HOH HOH . 
E 5 HOH A 145 545 40 HOH HOH . 
E 5 HOH A 146 546 152 HOH HOH . 
E 5 HOH A 147 547 69 HOH HOH . 
E 5 HOH A 148 548 227 HOH HOH . 
E 5 HOH A 149 549 74 HOH HOH . 
E 5 HOH A 150 550 164 HOH HOH . 
E 5 HOH A 151 551 27 HOH HOH . 
E 5 HOH A 152 552 139 HOH HOH . 
E 5 HOH A 153 553 99 HOH HOH . 
E 5 HOH A 154 554 34 HOH HOH . 
E 5 HOH A 155 555 149 HOH HOH . 
E 5 HOH A 156 556 2 HOH HOH . 
E 5 HOH A 157 557 188 HOH HOH . 
E 5 HOH A 158 558 116 HOH HOH . 
E 5 HOH A 159 559 212 HOH HOH . 
E 5 HOH A 160 560 218 HOH HOH . 
E 5 HOH A 161 561 54 HOH HOH . 
E 5 HOH A 162 562 41 HOH HOH . 
E 5 HOH A 163 563 222 HOH HOH . 
E 5 HOH A 164 564 111 HOH HOH . 
E 5 HOH A 165 565 214 HOH HOH . 
E 5 HOH A 166 566 183 HOH HOH . 
E 5 HOH A 167 567 184 HOH HOH . 
E 5 HOH A 168 568 141 HOH HOH . 
E 5 HOH A 169 569 14 HOH HOH . 
E 5 HOH A 170 570 126 HOH HOH . 
E 5 HOH A 171 571 117 HOH HOH . 
E 5 HOH A 172 572 148 HOH HOH . 
E 5 HOH A 173 573 110 HOH HOH . 
E 5 HOH A 174 574 194 HOH HOH . 
E 5 HOH A 175 575 224 HOH HOH . 
E 5 HOH A 176 576 96 HOH HOH . 
E 5 HOH A 177 577 144 HOH HOH . 
E 5 HOH A 178 578 185 HOH HOH . 
E 5 HOH A 179 579 166 HOH HOH . 
E 5 HOH A 180 580 103 HOH HOH . 
E 5 HOH A 181 581 176 HOH HOH . 
E 5 HOH A 182 582 165 HOH HOH . 
E 5 HOH A 183 583 221 HOH HOH . 
E 5 HOH A 184 584 198 HOH HOH . 
E 5 HOH A 185 585 23 HOH HOH . 
E 5 HOH A 186 586 223 HOH HOH . 
E 5 HOH A 187 587 155 HOH HOH . 
E 5 HOH A 188 588 102 HOH HOH . 
E 5 HOH A 189 589 94 HOH HOH . 
E 5 HOH A 190 590 97 HOH HOH . 
E 5 HOH A 191 591 156 HOH HOH . 
E 5 HOH A 192 592 151 HOH HOH . 
E 5 HOH A 193 593 137 HOH HOH . 
E 5 HOH A 194 594 142 HOH HOH . 
E 5 HOH A 195 595 138 HOH HOH . 
E 5 HOH A 196 596 197 HOH HOH . 
E 5 HOH A 197 597 196 HOH HOH . 
E 5 HOH A 198 598 191 HOH HOH . 
E 5 HOH A 199 599 118 HOH HOH . 
E 5 HOH A 200 600 206 HOH HOH . 
E 5 HOH A 201 601 120 HOH HOH . 
E 5 HOH A 202 602 112 HOH HOH . 
E 5 HOH A 203 603 226 HOH HOH . 
E 5 HOH A 204 604 114 HOH HOH . 
E 5 HOH A 205 605 84 HOH HOH . 
E 5 HOH A 206 606 193 HOH HOH . 
E 5 HOH A 207 607 113 HOH HOH . 
E 5 HOH A 208 608 177 HOH HOH . 
E 5 HOH A 209 609 43 HOH HOH . 
E 5 HOH A 210 610 220 HOH HOH . 
F 5 HOH B 1 201 64 HOH HOH . 
F 5 HOH B 2 202 130 HOH HOH . 
F 5 HOH B 3 203 65 HOH HOH . 
F 5 HOH B 4 204 131 HOH HOH . 
F 5 HOH B 5 205 133 HOH HOH . 
F 5 HOH B 6 206 168 HOH HOH . 
F 5 HOH B 7 207 132 HOH HOH . 
F 5 HOH B 8 208 134 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 DTT . . . D 4 2.003 -5.662 -16.159 1 22.65 ? S1 DTT 101 B 1 
HETATM 2 C C1 DTT . . . D 4 2.145 -4.156 -17.168 1 55.46 ? C1 DTT 101 B 1 
HETATM 3 C C2 DTT . . . D 4 1.109 -3.05 -16.945 1 51.03 ? C2 DTT 101 B 1 
HETATM 4 O O2 DTT . . . D 4 1.526 -2.204 -15.895 1 64.39 ? O2 DTT 101 B 1 
HETATM 5 C C3 DTT . . . D 4 -0.281 -3.608 -16.658 1 51.33 ? C3 DTT 101 B 1 
HETATM 6 O O3 DTT . . . D 4 -0.177 -4.599 -15.663 1 38.57 ? O3 DTT 101 B 1 
HETATM 7 C C4 DTT . . . D 4 -1.263 -2.528 -16.204 1 44.82 ? C4 DTT 101 B 1 
HETATM 8 S S4 DTT . . . D 4 -1.189 -2.168 -14.425 1 67.5 ? S4 DTT 101 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           214 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#