data_5IAV # _model_server_result.job_id abqKFpjBEpYoLZLICG8GYA _model_server_result.datetime_utc '2024-11-12 19:32:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5iav # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 5IAV # _exptl.entry_id 5IAV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.67 _cell.angle_gamma 90 _cell.entry_id 5IAV _cell.length_a 42.769 _cell.length_b 41.495 _cell.length_c 111.043 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IAV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 128 A HIS 127 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc2 A OD1 ASP 130 A ASP 129 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc3 A NE2 HIS 194 A HIS 193 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc4 C CO CO . A CO 301 1_555 D O6 MLI . A MLI 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc5 C CO CO . A CO 301 1_555 G O HOH . A HOH 495 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc6 C CO CO . A CO 301 1_555 G O HOH . A HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc7 B NE2 HIS 128 B HIS 127 1_555 E CO CO . B CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc8 B OD1 ASP 130 B ASP 129 1_555 E CO CO . B CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc9 B NE2 HIS 194 B HIS 193 1_555 E CO CO . B CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc10 E CO CO . B CO 301 1_555 F O7 MLI . B MLI 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.733 ? metalc ? metalc11 E CO CO . B CO 301 1_555 H O HOH . B HOH 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc12 E CO CO . B CO 301 1_555 H O HOH . B HOH 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5IAV _atom_sites.fract_transf_matrix[1][1] 0.023381 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002734 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024099 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 301 1 CO CO . D 3 MLI A 1 302 1 MLI MLI . E 2 CO B 1 301 2 CO CO . F 3 MLI B 1 302 2 MLI MLI . G 4 HOH A 1 401 248 HOH HOH . G 4 HOH A 2 402 107 HOH HOH . G 4 HOH A 3 403 17 HOH HOH . G 4 HOH A 4 404 131 HOH HOH . G 4 HOH A 5 405 146 HOH HOH . G 4 HOH A 6 406 11 HOH HOH . G 4 HOH A 7 407 117 HOH HOH . G 4 HOH A 8 408 205 HOH HOH . G 4 HOH A 9 409 44 HOH HOH . G 4 HOH A 10 410 56 HOH HOH . G 4 HOH A 11 411 106 HOH HOH . G 4 HOH A 12 412 22 HOH HOH . G 4 HOH A 13 413 26 HOH HOH . G 4 HOH A 14 414 84 HOH HOH . G 4 HOH A 15 415 64 HOH HOH . G 4 HOH A 16 416 114 HOH HOH . G 4 HOH A 17 417 79 HOH HOH . G 4 HOH A 18 418 148 HOH HOH . G 4 HOH A 19 419 6 HOH HOH . G 4 HOH A 20 420 119 HOH HOH . G 4 HOH A 21 421 16 HOH HOH . G 4 HOH A 22 422 25 HOH HOH . G 4 HOH A 23 423 60 HOH HOH . G 4 HOH A 24 424 128 HOH HOH . G 4 HOH A 25 425 14 HOH HOH . G 4 HOH A 26 426 129 HOH HOH . G 4 HOH A 27 427 28 HOH HOH . G 4 HOH A 28 428 90 HOH HOH . G 4 HOH A 29 429 45 HOH HOH . G 4 HOH A 30 430 4 HOH HOH . G 4 HOH A 31 431 256 HOH HOH . G 4 HOH A 32 432 153 HOH HOH . G 4 HOH A 33 433 223 HOH HOH . G 4 HOH A 34 434 213 HOH HOH . G 4 HOH A 35 435 196 HOH HOH . G 4 HOH A 36 436 122 HOH HOH . G 4 HOH A 37 437 116 HOH HOH . G 4 HOH A 38 438 85 HOH HOH . G 4 HOH A 39 439 43 HOH HOH . G 4 HOH A 40 440 39 HOH HOH . G 4 HOH A 41 441 184 HOH HOH . G 4 HOH A 42 442 42 HOH HOH . G 4 HOH A 43 443 164 HOH HOH . G 4 HOH A 44 444 8 HOH HOH . G 4 HOH A 45 445 55 HOH HOH . G 4 HOH A 46 446 113 HOH HOH . G 4 HOH A 47 447 36 HOH HOH . G 4 HOH A 48 448 100 HOH HOH . G 4 HOH A 49 449 130 HOH HOH . G 4 HOH A 50 450 1 HOH HOH . G 4 HOH A 51 451 91 HOH HOH . G 4 HOH A 52 452 13 HOH HOH . G 4 HOH A 53 453 181 HOH HOH . G 4 HOH A 54 454 51 HOH HOH . G 4 HOH A 55 455 222 HOH HOH . G 4 HOH A 56 456 38 HOH HOH . G 4 HOH A 57 457 46 HOH HOH . G 4 HOH A 58 458 35 HOH HOH . G 4 HOH A 59 459 40 HOH HOH . G 4 HOH A 60 460 53 HOH HOH . G 4 HOH A 61 461 142 HOH HOH . G 4 HOH A 62 462 144 HOH HOH . G 4 HOH A 63 463 77 HOH HOH . G 4 HOH A 64 464 78 HOH HOH . G 4 HOH A 65 465 70 HOH HOH . G 4 HOH A 66 466 37 HOH HOH . G 4 HOH A 67 467 71 HOH HOH . G 4 HOH A 68 468 47 HOH HOH . G 4 HOH A 69 469 87 HOH HOH . G 4 HOH A 70 470 20 HOH HOH . G 4 HOH A 71 471 207 HOH HOH . G 4 HOH A 72 472 136 HOH HOH . G 4 HOH A 73 473 209 HOH HOH . G 4 HOH A 74 474 27 HOH HOH . G 4 HOH A 75 475 21 HOH HOH . G 4 HOH A 76 476 219 HOH HOH . G 4 HOH A 77 477 104 HOH HOH . G 4 HOH A 78 478 5 HOH HOH . G 4 HOH A 79 479 204 HOH HOH . G 4 HOH A 80 480 76 HOH HOH . G 4 HOH A 81 481 2 HOH HOH . G 4 HOH A 82 482 7 HOH HOH . G 4 HOH A 83 483 155 HOH HOH . G 4 HOH A 84 484 140 HOH HOH . G 4 HOH A 85 485 65 HOH HOH . G 4 HOH A 86 486 127 HOH HOH . G 4 HOH A 87 487 156 HOH HOH . G 4 HOH A 88 488 72 HOH HOH . G 4 HOH A 89 489 31 HOH HOH . G 4 HOH A 90 490 99 HOH HOH . G 4 HOH A 91 491 83 HOH HOH . G 4 HOH A 92 492 162 HOH HOH . G 4 HOH A 93 493 63 HOH HOH . G 4 HOH A 94 494 93 HOH HOH . G 4 HOH A 95 495 94 HOH HOH . G 4 HOH A 96 496 236 HOH HOH . G 4 HOH A 97 497 118 HOH HOH . G 4 HOH A 98 498 18 HOH HOH . G 4 HOH A 99 499 245 HOH HOH . G 4 HOH A 100 500 183 HOH HOH . G 4 HOH A 101 501 240 HOH HOH . G 4 HOH A 102 502 143 HOH HOH . G 4 HOH A 103 503 9 HOH HOH . G 4 HOH A 104 504 58 HOH HOH . G 4 HOH A 105 505 195 HOH HOH . G 4 HOH A 106 506 92 HOH HOH . G 4 HOH A 107 507 182 HOH HOH . G 4 HOH A 108 508 52 HOH HOH . G 4 HOH A 109 509 69 HOH HOH . G 4 HOH A 110 510 145 HOH HOH . G 4 HOH A 111 511 138 HOH HOH . G 4 HOH A 112 512 15 HOH HOH . G 4 HOH A 113 513 188 HOH HOH . G 4 HOH A 114 514 166 HOH HOH . G 4 HOH A 115 515 33 HOH HOH . G 4 HOH A 116 516 206 HOH HOH . G 4 HOH A 117 517 48 HOH HOH . G 4 HOH A 118 518 173 HOH HOH . G 4 HOH A 119 519 241 HOH HOH . G 4 HOH A 120 520 190 HOH HOH . G 4 HOH A 121 521 234 HOH HOH . G 4 HOH A 122 522 101 HOH HOH . G 4 HOH A 123 523 257 HOH HOH . G 4 HOH A 124 524 171 HOH HOH . G 4 HOH A 125 525 97 HOH HOH . G 4 HOH A 126 526 176 HOH HOH . G 4 HOH A 127 527 253 HOH HOH . G 4 HOH A 128 528 203 HOH HOH . G 4 HOH A 129 529 151 HOH HOH . G 4 HOH A 130 530 189 HOH HOH . G 4 HOH A 131 531 98 HOH HOH . G 4 HOH A 132 532 221 HOH HOH . G 4 HOH A 133 533 34 HOH HOH . G 4 HOH A 134 534 89 HOH HOH . G 4 HOH A 135 535 30 HOH HOH . G 4 HOH A 136 536 133 HOH HOH . G 4 HOH A 137 537 170 HOH HOH . G 4 HOH A 138 538 218 HOH HOH . G 4 HOH A 139 539 110 HOH HOH . G 4 HOH A 140 540 185 HOH HOH . G 4 HOH A 141 541 224 HOH HOH . G 4 HOH A 142 542 220 HOH HOH . G 4 HOH A 143 543 237 HOH HOH . G 4 HOH A 144 544 50 HOH HOH . G 4 HOH A 145 545 172 HOH HOH . G 4 HOH A 146 546 198 HOH HOH . G 4 HOH A 147 547 217 HOH HOH . G 4 HOH A 148 548 239 HOH HOH . G 4 HOH A 149 549 49 HOH HOH . G 4 HOH A 150 550 199 HOH HOH . G 4 HOH A 151 551 210 HOH HOH . G 4 HOH A 152 552 179 HOH HOH . G 4 HOH A 153 553 211 HOH HOH . G 4 HOH A 154 554 178 HOH HOH . G 4 HOH A 155 555 141 HOH HOH . G 4 HOH A 156 556 105 HOH HOH . G 4 HOH A 157 557 149 HOH HOH . H 4 HOH B 1 401 168 HOH HOH . H 4 HOH B 2 402 158 HOH HOH . H 4 HOH B 3 403 81 HOH HOH . H 4 HOH B 4 404 255 HOH HOH . H 4 HOH B 5 405 80 HOH HOH . H 4 HOH B 6 406 230 HOH HOH . H 4 HOH B 7 407 154 HOH HOH . H 4 HOH B 8 408 108 HOH HOH . H 4 HOH B 9 409 126 HOH HOH . H 4 HOH B 10 410 238 HOH HOH . H 4 HOH B 11 411 163 HOH HOH . H 4 HOH B 12 412 157 HOH HOH . H 4 HOH B 13 413 96 HOH HOH . H 4 HOH B 14 414 41 HOH HOH . H 4 HOH B 15 415 88 HOH HOH . H 4 HOH B 16 416 123 HOH HOH . H 4 HOH B 17 417 3 HOH HOH . H 4 HOH B 18 418 147 HOH HOH . H 4 HOH B 19 419 86 HOH HOH . H 4 HOH B 20 420 174 HOH HOH . H 4 HOH B 21 421 54 HOH HOH . H 4 HOH B 22 422 197 HOH HOH . H 4 HOH B 23 423 66 HOH HOH . H 4 HOH B 24 424 137 HOH HOH . H 4 HOH B 25 425 159 HOH HOH . H 4 HOH B 26 426 68 HOH HOH . H 4 HOH B 27 427 62 HOH HOH . H 4 HOH B 28 428 152 HOH HOH . H 4 HOH B 29 429 59 HOH HOH . H 4 HOH B 30 430 121 HOH HOH . H 4 HOH B 31 431 10 HOH HOH . H 4 HOH B 32 432 73 HOH HOH . H 4 HOH B 33 433 231 HOH HOH . H 4 HOH B 34 434 169 HOH HOH . H 4 HOH B 35 435 61 HOH HOH . H 4 HOH B 36 436 150 HOH HOH . H 4 HOH B 37 437 120 HOH HOH . H 4 HOH B 38 438 202 HOH HOH . H 4 HOH B 39 439 23 HOH HOH . H 4 HOH B 40 440 132 HOH HOH . H 4 HOH B 41 441 95 HOH HOH . H 4 HOH B 42 442 12 HOH HOH . H 4 HOH B 43 443 74 HOH HOH . H 4 HOH B 44 444 249 HOH HOH . H 4 HOH B 45 445 19 HOH HOH . H 4 HOH B 46 446 57 HOH HOH . H 4 HOH B 47 447 125 HOH HOH . H 4 HOH B 48 448 192 HOH HOH . H 4 HOH B 49 449 102 HOH HOH . H 4 HOH B 50 450 112 HOH HOH . H 4 HOH B 51 451 75 HOH HOH . H 4 HOH B 52 452 115 HOH HOH . H 4 HOH B 53 453 109 HOH HOH . H 4 HOH B 54 454 247 HOH HOH . H 4 HOH B 55 455 243 HOH HOH . H 4 HOH B 56 456 139 HOH HOH . H 4 HOH B 57 457 161 HOH HOH . H 4 HOH B 58 458 191 HOH HOH . H 4 HOH B 59 459 200 HOH HOH . H 4 HOH B 60 460 134 HOH HOH . H 4 HOH B 61 461 82 HOH HOH . H 4 HOH B 62 462 32 HOH HOH . H 4 HOH B 63 463 235 HOH HOH . H 4 HOH B 64 464 167 HOH HOH . H 4 HOH B 65 465 135 HOH HOH . H 4 HOH B 66 466 225 HOH HOH . H 4 HOH B 67 467 214 HOH HOH . H 4 HOH B 68 468 111 HOH HOH . H 4 HOH B 69 469 208 HOH HOH . H 4 HOH B 70 470 175 HOH HOH . H 4 HOH B 71 471 160 HOH HOH . H 4 HOH B 72 472 244 HOH HOH . H 4 HOH B 73 473 29 HOH HOH . H 4 HOH B 74 474 180 HOH HOH . H 4 HOH B 75 475 186 HOH HOH . H 4 HOH B 76 476 103 HOH HOH . H 4 HOH B 77 477 24 HOH HOH . H 4 HOH B 78 478 165 HOH HOH . H 4 HOH B 79 479 193 HOH HOH . H 4 HOH B 80 480 194 HOH HOH . H 4 HOH B 81 481 216 HOH HOH . H 4 HOH B 82 482 177 HOH HOH . H 4 HOH B 83 483 212 HOH HOH . H 4 HOH B 84 484 227 HOH HOH . H 4 HOH B 85 485 228 HOH HOH . H 4 HOH B 86 486 233 HOH HOH . H 4 HOH B 87 487 215 HOH HOH . H 4 HOH B 88 488 187 HOH HOH . H 4 HOH B 89 489 246 HOH HOH . H 4 HOH B 90 490 229 HOH HOH . H 4 HOH B 91 491 251 HOH HOH . H 4 HOH B 92 492 226 HOH HOH . H 4 HOH B 93 493 250 HOH HOH . H 4 HOH B 94 494 67 HOH HOH . H 4 HOH B 95 495 242 HOH HOH . H 4 HOH B 96 496 124 HOH HOH . H 4 HOH B 97 497 201 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -3.915 _atom_site.Cartn_y 6.692 _atom_site.Cartn_z 11.147 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.94 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #