data_5IC3
#
_model_server_result.job_id            q0iTZnt3X2-ipMTAWMDckQ 
_model_server_result.datetime_utc      '2024-11-24 13:38:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ic3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    5IC3 
#
_exptl.entry_id    5IC3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              168.15 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            4-[methyl(nitroso)amino]benzene-1,2-diol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.47 
_cell.angle_gamma         90 
_cell.entry_id            5IC3 
_cell.length_a            32.772 
_cell.length_b            48.252 
_cell.length_c            51.639 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5IC3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,H 1 1 
B,D,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             44 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              319 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            E 
_struct_conn.ptnr2_label_atom_id            C4 
_struct_conn.ptnr2_label_comp_id            PQR 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             PQR 
_struct_conn.ptnr2_auth_seq_id              401 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.818 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C7 H8 N2 O3' 
_chem_comp.formula_weight    168.15 
_chem_comp.id                PQR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-[methyl(nitroso)amino]benzene-1,2-diol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Methyl-3,4-dephostatin 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3 N3 PQR doub 241 n n 
N3 N2 PQR sing 242 n n 
N2 C10 PQR sing 243 n n 
N2 C9 PQR sing 244 n n 
C4 C9 PQR doub 245 n y 
C4 C5 PQR sing 246 n y 
C9 C8 PQR sing 247 n y 
C5 C6 PQR doub 248 n y 
C8 C7 PQR doub 249 n y 
C6 C7 PQR sing 250 n y 
C6 O5 PQR sing 251 n n 
C7 O4 PQR sing 252 n n 
C10 H4 PQR sing 253 n n 
C10 H5 PQR sing 254 n n 
C10 H6 PQR sing 255 n n 
C5 H7 PQR sing 256 n n 
O5 H2 PQR sing 257 n n 
O4 H15 PQR sing 258 n n 
C4 H8 PQR sing 259 n n 
C8 H1 PQR sing 260 n n 
#
_atom_sites.entry_id                     5IC3 
_atom_sites.fract_transf_matrix[1][1]    0.030514 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006191 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020724 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01976 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 PQR A 1 401 101 PQR PQR . 
F 4 HOH A 1 501 201 HOH HOH . 
F 4 HOH A 2 502 202 HOH HOH . 
F 4 HOH A 3 503 203 HOH HOH . 
F 4 HOH A 4 504 204 HOH HOH . 
F 4 HOH A 5 505 205 HOH HOH . 
F 4 HOH A 6 506 206 HOH HOH . 
F 4 HOH A 7 507 207 HOH HOH . 
F 4 HOH A 8 508 208 HOH HOH . 
F 4 HOH A 9 509 209 HOH HOH . 
F 4 HOH A 10 510 210 HOH HOH . 
F 4 HOH A 11 511 211 HOH HOH . 
F 4 HOH A 12 512 212 HOH HOH . 
F 4 HOH A 13 513 213 HOH HOH . 
F 4 HOH A 14 514 214 HOH HOH . 
F 4 HOH A 15 515 215 HOH HOH . 
F 4 HOH A 16 516 216 HOH HOH . 
F 4 HOH A 17 517 217 HOH HOH . 
F 4 HOH A 18 518 218 HOH HOH . 
F 4 HOH A 19 519 219 HOH HOH . 
F 4 HOH A 20 520 220 HOH HOH . 
F 4 HOH A 21 521 221 HOH HOH . 
F 4 HOH A 22 522 222 HOH HOH . 
F 4 HOH A 23 523 223 HOH HOH . 
F 4 HOH A 24 524 224 HOH HOH . 
F 4 HOH A 25 525 225 HOH HOH . 
F 4 HOH A 26 526 226 HOH HOH . 
F 4 HOH A 27 527 227 HOH HOH . 
F 4 HOH A 28 528 228 HOH HOH . 
F 4 HOH A 29 529 229 HOH HOH . 
F 4 HOH A 30 530 230 HOH HOH . 
F 4 HOH A 31 531 231 HOH HOH . 
F 4 HOH A 32 532 232 HOH HOH . 
F 4 HOH A 33 533 233 HOH HOH . 
F 4 HOH A 34 534 234 HOH HOH . 
F 4 HOH A 35 535 235 HOH HOH . 
F 4 HOH A 36 536 236 HOH HOH . 
F 4 HOH A 37 537 237 HOH HOH . 
F 4 HOH A 38 538 238 HOH HOH . 
F 4 HOH A 39 539 239 HOH HOH . 
F 4 HOH A 40 540 240 HOH HOH . 
F 4 HOH A 41 541 241 HOH HOH . 
F 4 HOH A 42 542 242 HOH HOH . 
F 4 HOH A 43 543 243 HOH HOH . 
F 4 HOH A 44 544 244 HOH HOH . 
F 4 HOH A 45 545 245 HOH HOH . 
F 4 HOH A 46 546 246 HOH HOH . 
F 4 HOH A 47 547 247 HOH HOH . 
F 4 HOH A 48 548 248 HOH HOH . 
F 4 HOH A 49 549 249 HOH HOH . 
F 4 HOH A 50 550 250 HOH HOH . 
F 4 HOH A 51 551 251 HOH HOH . 
F 4 HOH A 52 552 252 HOH HOH . 
F 4 HOH A 53 553 253 HOH HOH . 
F 4 HOH A 54 554 254 HOH HOH . 
F 4 HOH A 55 555 255 HOH HOH . 
F 4 HOH A 56 556 256 HOH HOH . 
F 4 HOH A 57 557 257 HOH HOH . 
F 4 HOH A 58 558 258 HOH HOH . 
F 4 HOH A 59 559 259 HOH HOH . 
F 4 HOH A 60 560 260 HOH HOH . 
F 4 HOH A 61 561 261 HOH HOH . 
F 4 HOH A 62 562 262 HOH HOH . 
F 4 HOH A 63 563 263 HOH HOH . 
F 4 HOH A 64 564 264 HOH HOH . 
F 4 HOH A 65 565 265 HOH HOH . 
F 4 HOH A 66 566 266 HOH HOH . 
F 4 HOH A 67 567 267 HOH HOH . 
G 4 HOH B 1 401 101 HOH HOH . 
G 4 HOH B 2 402 102 HOH HOH . 
G 4 HOH B 3 403 103 HOH HOH . 
G 4 HOH B 4 404 104 HOH HOH . 
G 4 HOH B 5 405 105 HOH HOH . 
G 4 HOH B 6 406 106 HOH HOH . 
G 4 HOH B 7 407 107 HOH HOH . 
G 4 HOH B 8 408 108 HOH HOH . 
G 4 HOH B 9 409 109 HOH HOH . 
G 4 HOH B 10 410 110 HOH HOH . 
G 4 HOH B 11 411 111 HOH HOH . 
G 4 HOH B 12 412 112 HOH HOH . 
G 4 HOH B 13 413 113 HOH HOH . 
G 4 HOH B 14 414 114 HOH HOH . 
G 4 HOH B 15 415 115 HOH HOH . 
G 4 HOH B 16 416 116 HOH HOH . 
G 4 HOH B 17 417 117 HOH HOH . 
G 4 HOH B 18 418 118 HOH HOH . 
G 4 HOH B 19 419 119 HOH HOH . 
G 4 HOH B 20 420 120 HOH HOH . 
G 4 HOH B 21 421 121 HOH HOH . 
G 4 HOH B 22 422 122 HOH HOH . 
G 4 HOH B 23 423 123 HOH HOH . 
G 4 HOH B 24 424 124 HOH HOH . 
G 4 HOH B 25 425 125 HOH HOH . 
G 4 HOH B 26 426 126 HOH HOH . 
G 4 HOH B 27 427 127 HOH HOH . 
G 4 HOH B 28 428 128 HOH HOH . 
G 4 HOH B 29 429 129 HOH HOH . 
G 4 HOH B 30 430 130 HOH HOH . 
G 4 HOH B 31 431 131 HOH HOH . 
G 4 HOH B 32 432 132 HOH HOH . 
G 4 HOH B 33 433 133 HOH HOH . 
G 4 HOH B 34 434 134 HOH HOH . 
G 4 HOH B 35 435 135 HOH HOH . 
G 4 HOH B 36 436 136 HOH HOH . 
G 4 HOH B 37 437 137 HOH HOH . 
G 4 HOH B 38 438 138 HOH HOH . 
G 4 HOH B 39 439 139 HOH HOH . 
G 4 HOH B 40 440 140 HOH HOH . 
G 4 HOH B 41 441 141 HOH HOH . 
G 4 HOH B 42 442 142 HOH HOH . 
G 4 HOH B 43 443 143 HOH HOH . 
G 4 HOH B 44 444 144 HOH HOH . 
G 4 HOH B 45 445 145 HOH HOH . 
G 4 HOH B 46 446 146 HOH HOH . 
G 4 HOH B 47 447 147 HOH HOH . 
G 4 HOH B 48 448 148 HOH HOH . 
G 4 HOH B 49 449 149 HOH HOH . 
G 4 HOH B 50 450 150 HOH HOH . 
G 4 HOH B 51 451 151 HOH HOH . 
G 4 HOH B 52 452 152 HOH HOH . 
G 4 HOH B 53 453 153 HOH HOH . 
G 4 HOH B 54 454 154 HOH HOH . 
G 4 HOH B 55 455 155 HOH HOH . 
G 4 HOH B 56 456 156 HOH HOH . 
G 4 HOH B 57 457 157 HOH HOH . 
G 4 HOH B 58 458 158 HOH HOH . 
H 4 HOH C 1 101 101 HOH HOH . 
H 4 HOH C 2 102 102 HOH HOH . 
H 4 HOH C 3 103 103 HOH HOH . 
H 4 HOH C 4 104 104 HOH HOH . 
H 4 HOH C 5 105 105 HOH HOH . 
H 4 HOH C 6 106 106 HOH HOH . 
H 4 HOH C 7 107 107 HOH HOH . 
H 4 HOH C 8 108 108 HOH HOH . 
H 4 HOH C 9 109 109 HOH HOH . 
H 4 HOH C 10 110 110 HOH HOH . 
H 4 HOH C 11 111 111 HOH HOH . 
H 4 HOH C 12 112 112 HOH HOH . 
I 4 HOH D 1 101 101 HOH HOH . 
I 4 HOH D 2 102 102 HOH HOH . 
I 4 HOH D 3 103 103 HOH HOH . 
I 4 HOH D 4 104 104 HOH HOH . 
I 4 HOH D 5 105 105 HOH HOH . 
I 4 HOH D 6 106 106 HOH HOH . 
I 4 HOH D 7 107 107 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O5 PQR . . . E 3 43.386 35.1 20.387 1 74.18 ? O5 PQR 401 A 1 
HETATM 2 C C6 PQR . . . E 3 42.929 34.569 19.156 1 72 ? C6 PQR 401 A 1 
HETATM 3 C C7 PQR . . . E 3 43.379 35.121 17.943 1 68.76 ? C7 PQR 401 A 1 
HETATM 4 O O4 PQR . . . E 3 44.274 36.192 17.937 1 68.65 ? O4 PQR 401 A 1 
HETATM 5 C C8 PQR . . . E 3 42.92 34.583 16.718 1 65.78 ? C8 PQR 401 A 1 
HETATM 6 C C9 PQR . . . E 3 42.011 33.496 16.698 1 66.49 ? C9 PQR 401 A 1 
HETATM 7 N N2 PQR . . . E 3 41.58 32.995 15.416 1 68.9 ? N2 PQR 401 A 1 
HETATM 8 N N3 PQR . . . E 3 42.306 31.994 14.79 1 71.41 ? N3 PQR 401 A 1 
HETATM 9 O O3 PQR . . . E 3 42.049 31.677 13.606 1 71.51 ? O3 PQR 401 A 1 
HETATM 10 C C10 PQR . . . E 3 40.404 33.539 14.758 1 72.46 ? C10 PQR 401 A 1 
HETATM 11 C C5 PQR . . . E 3 42.028 33.489 19.143 1 69.07 ? C5 PQR 401 A 1 
HETATM 12 C C4 PQR . . . E 3 41.55 32.942 17.911 1 66.4 ? C4 PQR 401 A 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           216 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           12 
#