data_5IDP # _model_server_result.job_id iRj0hezZUNJT5kGXCAQJxQ _model_server_result.datetime_utc '2024-10-19 16:48:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5idp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 5IDP # _exptl.entry_id 5IDP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5IDP _cell.length_a 71.113 _cell.length_b 71.093 _cell.length_c 172.335 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IDP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 130 n n C O2 FMT sing 131 n n C H FMT sing 132 n n O2 HO2 FMT sing 133 n n # _atom_sites.entry_id 5IDP _atom_sites.fract_transf_matrix[1][1] 0.014062 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014066 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005803 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 6A6 A 1 401 1 6A6 INX . D 4 FMT A 1 402 1 FMT FMT . E 4 FMT A 1 403 2 FMT FMT . F 4 FMT B 1 301 3 FMT FMT . G 4 FMT B 1 302 4 FMT FMT . H 4 FMT B 1 303 5 FMT FMT . I 5 HOH A 1 501 56 HOH HOH . I 5 HOH A 2 502 28 HOH HOH . I 5 HOH A 3 503 64 HOH HOH . I 5 HOH A 4 504 3 HOH HOH . I 5 HOH A 5 505 9 HOH HOH . I 5 HOH A 6 506 10 HOH HOH . I 5 HOH A 7 507 48 HOH HOH . I 5 HOH A 8 508 41 HOH HOH . I 5 HOH A 9 509 61 HOH HOH . I 5 HOH A 10 510 46 HOH HOH . I 5 HOH A 11 511 63 HOH HOH . I 5 HOH A 12 512 25 HOH HOH . I 5 HOH A 13 513 45 HOH HOH . I 5 HOH A 14 514 29 HOH HOH . I 5 HOH A 15 515 31 HOH HOH . I 5 HOH A 16 516 44 HOH HOH . I 5 HOH A 17 517 40 HOH HOH . I 5 HOH A 18 518 11 HOH HOH . I 5 HOH A 19 519 43 HOH HOH . I 5 HOH A 20 520 24 HOH HOH . I 5 HOH A 21 521 57 HOH HOH . I 5 HOH A 22 522 13 HOH HOH . I 5 HOH A 23 523 27 HOH HOH . I 5 HOH A 24 524 62 HOH HOH . I 5 HOH A 25 525 1 HOH HOH . I 5 HOH A 26 526 23 HOH HOH . I 5 HOH A 27 527 26 HOH HOH . I 5 HOH A 28 528 59 HOH HOH . I 5 HOH A 29 529 60 HOH HOH . I 5 HOH A 30 530 7 HOH HOH . I 5 HOH A 31 531 42 HOH HOH . I 5 HOH A 32 532 58 HOH HOH . I 5 HOH A 33 533 18 HOH HOH . I 5 HOH A 34 534 15 HOH HOH . I 5 HOH A 35 535 20 HOH HOH . I 5 HOH A 36 536 14 HOH HOH . I 5 HOH A 37 537 38 HOH HOH . I 5 HOH A 38 538 39 HOH HOH . I 5 HOH A 39 539 2 HOH HOH . I 5 HOH A 40 540 54 HOH HOH . I 5 HOH A 41 541 16 HOH HOH . I 5 HOH A 42 542 12 HOH HOH . I 5 HOH A 43 543 66 HOH HOH . J 5 HOH B 1 401 34 HOH HOH . J 5 HOH B 2 402 30 HOH HOH . J 5 HOH B 3 403 49 HOH HOH . J 5 HOH B 4 404 55 HOH HOH . J 5 HOH B 5 405 51 HOH HOH . J 5 HOH B 6 406 53 HOH HOH . J 5 HOH B 7 407 5 HOH HOH . J 5 HOH B 8 408 4 HOH HOH . J 5 HOH B 9 409 6 HOH HOH . J 5 HOH B 10 410 47 HOH HOH . J 5 HOH B 11 411 19 HOH HOH . J 5 HOH B 12 412 36 HOH HOH . J 5 HOH B 13 413 33 HOH HOH . J 5 HOH B 14 414 35 HOH HOH . J 5 HOH B 15 415 17 HOH HOH . J 5 HOH B 16 416 50 HOH HOH . J 5 HOH B 17 417 22 HOH HOH . J 5 HOH B 18 418 8 HOH HOH . J 5 HOH B 19 419 37 HOH HOH . J 5 HOH B 20 420 32 HOH HOH . J 5 HOH B 21 421 21 HOH HOH . J 5 HOH B 22 422 65 HOH HOH . J 5 HOH B 23 423 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . F 4 -20.643 -24.321 45.109 1 53.37 ? C FMT 301 B 1 HETATM 2 O O1 FMT . . . F 4 -19.462 -24.12 44.878 1 62.94 ? O1 FMT 301 B 1 HETATM 3 O O2 FMT . . . F 4 -21.316 -23.439 45.841 1 50.54 ? O2 FMT 301 B 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 84 _model_server_stats.create_model_time_ms 44 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #