data_5IE4 # _model_server_result.job_id dGr0_npqtJgznmEjpNVteg _model_server_result.datetime_utc '2024-10-12 19:29:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ie4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 5IE4 # _exptl.entry_id 5IE4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 320.38 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3S,7R,11E)-7,14,16-trihydroxy-3-methyl-3,4,5,6,7,8,9,10-octahydro-1H-2-benzoxacyclotetradecin-1-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5IE4 _cell.length_a 86.205 _cell.length_b 86.205 _cell.length_c 473.247 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IE4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G 1 1 C,H 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N # _chem_comp.formula 'C18 H24 O5' _chem_comp.formula_weight 320.38 _chem_comp.id 36J _chem_comp.mon_nstd_flag . _chem_comp.name (3S,7R,11E)-7,14,16-trihydroxy-3-methyl-3,4,5,6,7,8,9,10-octahydro-1H-2-benzoxacyclotetradecin-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAC CAR 36J sing 1 n n CAR CAH 36J doub 2 n y CAR CAI 36J sing 3 n y CAH CAS 36J sing 4 n y CAI CAT 36J doub 5 n y CAS OAD 36J sing 6 n n CAS CAU 36J doub 7 n y CAT CAU 36J sing 8 n y CAT CAG 36J sing 9 n n CAU CAQ 36J sing 10 n n CAG CAF 36J doub 11 e n CAF CAJ 36J sing 12 n n CAQ OAB 36J doub 13 n n CAQ OAP 36J sing 14 n n CAJ CAK 36J sing 15 n n OAP CAV 36J sing 16 n n CAK CAN 36J sing 17 n n CAA CAV 36J sing 18 n n CAV CAM 36J sing 19 n n CAN CAW 36J sing 20 n n CAM CAL 36J sing 21 n n CAW OAE 36J sing 22 n n CAW CAO 36J sing 23 n n CAL CAO 36J sing 24 n n CAO H1 36J sing 25 n n CAO H2 36J sing 26 n n CAL H3 36J sing 27 n n CAL H4 36J sing 28 n n CAM H5 36J sing 29 n n CAM H6 36J sing 30 n n CAV H7 36J sing 31 n n CAA H8 36J sing 32 n n CAA H9 36J sing 33 n n CAA H10 36J sing 34 n n OAD H11 36J sing 35 n n CAH H12 36J sing 36 n n OAC H13 36J sing 37 n n CAI H14 36J sing 38 n n CAG H15 36J sing 39 n n CAF H16 36J sing 40 n n CAJ H17 36J sing 41 n n CAJ H18 36J sing 42 n n CAK H19 36J sing 43 n n CAK H20 36J sing 44 n n CAN H21 36J sing 45 n n CAN H22 36J sing 46 n n CAW H23 36J sing 47 n n OAE H24 36J sing 48 n n # _atom_sites.entry_id 5IE4 _atom_sites.fract_transf_matrix[1][1] 0.0116 _atom_sites.fract_transf_matrix[1][2] 0.006697 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013395 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002113 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 36J A 1 300 300 36J 36J . E 2 36J B 1 301 301 36J 36J . F 3 HOH A 1 401 154 HOH HOH . F 3 HOH A 2 402 128 HOH HOH . F 3 HOH A 3 403 38 HOH HOH . F 3 HOH A 4 404 36 HOH HOH . F 3 HOH A 5 405 142 HOH HOH . F 3 HOH A 6 406 19 HOH HOH . F 3 HOH A 7 407 169 HOH HOH . F 3 HOH A 8 408 25 HOH HOH . F 3 HOH A 9 409 103 HOH HOH . F 3 HOH A 10 410 16 HOH HOH . F 3 HOH A 11 411 79 HOH HOH . F 3 HOH A 12 412 131 HOH HOH . F 3 HOH A 13 413 51 HOH HOH . F 3 HOH A 14 414 141 HOH HOH . F 3 HOH A 15 415 24 HOH HOH . F 3 HOH A 16 416 153 HOH HOH . F 3 HOH A 17 417 80 HOH HOH . F 3 HOH A 18 418 94 HOH HOH . F 3 HOH A 19 419 95 HOH HOH . F 3 HOH A 20 420 89 HOH HOH . F 3 HOH A 21 421 17 HOH HOH . F 3 HOH A 22 422 61 HOH HOH . F 3 HOH A 23 423 43 HOH HOH . F 3 HOH A 24 424 167 HOH HOH . F 3 HOH A 25 425 119 HOH HOH . F 3 HOH A 26 426 30 HOH HOH . F 3 HOH A 27 427 50 HOH HOH . F 3 HOH A 28 428 64 HOH HOH . F 3 HOH A 29 429 140 HOH HOH . F 3 HOH A 30 430 86 HOH HOH . F 3 HOH A 31 431 101 HOH HOH . F 3 HOH A 32 432 147 HOH HOH . F 3 HOH A 33 433 118 HOH HOH . F 3 HOH A 34 434 72 HOH HOH . F 3 HOH A 35 435 148 HOH HOH . F 3 HOH A 36 436 57 HOH HOH . F 3 HOH A 37 437 144 HOH HOH . F 3 HOH A 38 438 5 HOH HOH . F 3 HOH A 39 439 178 HOH HOH . F 3 HOH A 40 440 70 HOH HOH . F 3 HOH A 41 441 121 HOH HOH . F 3 HOH A 42 442 182 HOH HOH . F 3 HOH A 43 443 90 HOH HOH . F 3 HOH A 44 444 45 HOH HOH . F 3 HOH A 45 445 40 HOH HOH . F 3 HOH A 46 446 176 HOH HOH . F 3 HOH A 47 447 155 HOH HOH . F 3 HOH A 48 448 32 HOH HOH . F 3 HOH A 49 449 12 HOH HOH . F 3 HOH A 50 450 73 HOH HOH . F 3 HOH A 51 451 183 HOH HOH . F 3 HOH A 52 452 81 HOH HOH . F 3 HOH A 53 453 98 HOH HOH . F 3 HOH A 54 454 75 HOH HOH . F 3 HOH A 55 455 44 HOH HOH . F 3 HOH A 56 456 120 HOH HOH . F 3 HOH A 57 457 143 HOH HOH . F 3 HOH A 58 458 58 HOH HOH . F 3 HOH A 59 459 3 HOH HOH . F 3 HOH A 60 460 46 HOH HOH . F 3 HOH A 61 461 102 HOH HOH . F 3 HOH A 62 462 108 HOH HOH . F 3 HOH A 63 463 39 HOH HOH . F 3 HOH A 64 464 99 HOH HOH . F 3 HOH A 65 465 55 HOH HOH . F 3 HOH A 66 466 179 HOH HOH . F 3 HOH A 67 467 130 HOH HOH . F 3 HOH A 68 468 28 HOH HOH . F 3 HOH A 69 469 105 HOH HOH . F 3 HOH A 70 470 129 HOH HOH . G 3 HOH B 1 401 126 HOH HOH . G 3 HOH B 2 402 52 HOH HOH . G 3 HOH B 3 403 145 HOH HOH . G 3 HOH B 4 404 14 HOH HOH . G 3 HOH B 5 405 20 HOH HOH . G 3 HOH B 6 406 62 HOH HOH . G 3 HOH B 7 407 184 HOH HOH . G 3 HOH B 8 408 63 HOH HOH . G 3 HOH B 9 409 190 HOH HOH . G 3 HOH B 10 410 69 HOH HOH . G 3 HOH B 11 411 68 HOH HOH . G 3 HOH B 12 412 122 HOH HOH . G 3 HOH B 13 413 191 HOH HOH . G 3 HOH B 14 414 74 HOH HOH . G 3 HOH B 15 415 59 HOH HOH . G 3 HOH B 16 416 117 HOH HOH . G 3 HOH B 17 417 113 HOH HOH . G 3 HOH B 18 418 21 HOH HOH . G 3 HOH B 19 419 60 HOH HOH . G 3 HOH B 20 420 149 HOH HOH . G 3 HOH B 21 421 54 HOH HOH . G 3 HOH B 22 422 26 HOH HOH . G 3 HOH B 23 423 37 HOH HOH . G 3 HOH B 24 424 11 HOH HOH . G 3 HOH B 25 425 150 HOH HOH . G 3 HOH B 26 426 13 HOH HOH . G 3 HOH B 27 427 10 HOH HOH . G 3 HOH B 28 428 71 HOH HOH . G 3 HOH B 29 429 87 HOH HOH . G 3 HOH B 30 430 152 HOH HOH . G 3 HOH B 31 431 6 HOH HOH . G 3 HOH B 32 432 48 HOH HOH . G 3 HOH B 33 433 33 HOH HOH . G 3 HOH B 34 434 47 HOH HOH . G 3 HOH B 35 435 2 HOH HOH . G 3 HOH B 36 436 107 HOH HOH . G 3 HOH B 37 437 7 HOH HOH . G 3 HOH B 38 438 189 HOH HOH . G 3 HOH B 39 439 139 HOH HOH . G 3 HOH B 40 440 151 HOH HOH . G 3 HOH B 41 441 22 HOH HOH . G 3 HOH B 42 442 175 HOH HOH . G 3 HOH B 43 443 156 HOH HOH . G 3 HOH B 44 444 49 HOH HOH . G 3 HOH B 45 445 92 HOH HOH . G 3 HOH B 46 446 114 HOH HOH . G 3 HOH B 47 447 134 HOH HOH . G 3 HOH B 48 448 112 HOH HOH . G 3 HOH B 49 449 31 HOH HOH . G 3 HOH B 50 450 42 HOH HOH . G 3 HOH B 51 451 124 HOH HOH . G 3 HOH B 52 452 161 HOH HOH . G 3 HOH B 53 453 1 HOH HOH . G 3 HOH B 54 454 109 HOH HOH . G 3 HOH B 55 455 158 HOH HOH . G 3 HOH B 56 456 78 HOH HOH . G 3 HOH B 57 457 27 HOH HOH . G 3 HOH B 58 458 133 HOH HOH . G 3 HOH B 59 459 18 HOH HOH . G 3 HOH B 60 460 125 HOH HOH . G 3 HOH B 61 461 4 HOH HOH . G 3 HOH B 62 462 100 HOH HOH . G 3 HOH B 63 463 8 HOH HOH . G 3 HOH B 64 464 174 HOH HOH . G 3 HOH B 65 465 123 HOH HOH . G 3 HOH B 66 466 136 HOH HOH . G 3 HOH B 67 467 23 HOH HOH . G 3 HOH B 68 468 104 HOH HOH . G 3 HOH B 69 469 115 HOH HOH . G 3 HOH B 70 470 65 HOH HOH . G 3 HOH B 71 471 67 HOH HOH . G 3 HOH B 72 472 116 HOH HOH . G 3 HOH B 73 473 187 HOH HOH . G 3 HOH B 74 474 91 HOH HOH . G 3 HOH B 75 475 84 HOH HOH . G 3 HOH B 76 476 34 HOH HOH . H 3 HOH C 1 301 159 HOH HOH . H 3 HOH C 2 302 93 HOH HOH . H 3 HOH C 3 303 82 HOH HOH . H 3 HOH C 4 304 199 HOH HOH . H 3 HOH C 5 305 192 HOH HOH . H 3 HOH C 6 306 137 HOH HOH . H 3 HOH C 7 307 56 HOH HOH . H 3 HOH C 8 308 168 HOH HOH . H 3 HOH C 9 309 195 HOH HOH . H 3 HOH C 10 310 185 HOH HOH . H 3 HOH C 11 311 106 HOH HOH . H 3 HOH C 12 312 196 HOH HOH . H 3 HOH C 13 313 29 HOH HOH . H 3 HOH C 14 314 35 HOH HOH . H 3 HOH C 15 315 198 HOH HOH . H 3 HOH C 16 316 88 HOH HOH . H 3 HOH C 17 317 166 HOH HOH . H 3 HOH C 18 318 160 HOH HOH . H 3 HOH C 19 319 164 HOH HOH . H 3 HOH C 20 320 76 HOH HOH . H 3 HOH C 21 321 85 HOH HOH . H 3 HOH C 22 322 53 HOH HOH . H 3 HOH C 23 323 194 HOH HOH . H 3 HOH C 24 324 163 HOH HOH . H 3 HOH C 25 325 186 HOH HOH . H 3 HOH C 26 326 180 HOH HOH . H 3 HOH C 27 327 83 HOH HOH . H 3 HOH C 28 328 193 HOH HOH . H 3 HOH C 29 329 66 HOH HOH . H 3 HOH C 30 330 111 HOH HOH . H 3 HOH C 31 331 138 HOH HOH . H 3 HOH C 32 332 197 HOH HOH . H 3 HOH C 33 333 165 HOH HOH . H 3 HOH C 34 334 135 HOH HOH . H 3 HOH C 35 335 9 HOH HOH . H 3 HOH C 36 336 157 HOH HOH . H 3 HOH C 37 337 181 HOH HOH . H 3 HOH C 38 338 177 HOH HOH . H 3 HOH C 39 339 15 HOH HOH . H 3 HOH C 40 340 132 HOH HOH . H 3 HOH C 41 341 110 HOH HOH . H 3 HOH C 42 342 188 HOH HOH . H 3 HOH C 43 343 41 HOH HOH . H 3 HOH C 44 344 170 HOH HOH . H 3 HOH C 45 345 96 HOH HOH . H 3 HOH C 46 346 201 HOH HOH . H 3 HOH C 47 347 171 HOH HOH . H 3 HOH C 48 348 77 HOH HOH . H 3 HOH C 49 349 173 HOH HOH . H 3 HOH C 50 350 172 HOH HOH . H 3 HOH C 51 351 162 HOH HOH . H 3 HOH C 52 352 146 HOH HOH . H 3 HOH C 53 353 127 HOH HOH . H 3 HOH C 54 354 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAO 36J . . . E 2 -4.733 30.449 -17.913 1 84.48 ? CAO 36J 301 B 1 HETATM 2 C CAL 36J . . . E 2 -4.187 31.138 -19.163 1 80.64 ? CAL 36J 301 B 1 HETATM 3 C CAM 36J . . . E 2 -4.167 30.148 -20.34 1 67.51 ? CAM 36J 301 B 1 HETATM 4 C CAV 36J . . . E 2 -5.183 30.546 -21.404 1 52.34 ? CAV 36J 301 B 1 HETATM 5 C CAA 36J . . . E 2 -4.496 31.488 -22.382 1 51.42 ? CAA 36J 301 B 1 HETATM 6 O OAP 36J . . . E 2 -6.288 31.235 -20.797 1 46.11 ? OAP 36J 301 B 1 HETATM 7 C CAQ 36J . . . E 2 -7.226 31.603 -21.716 1 49.51 ? CAQ 36J 301 B 1 HETATM 8 O OAB 36J . . . E 2 -7.132 31.296 -22.904 1 45.35 ? OAB 36J 301 B 1 HETATM 9 C CAU 36J . . . E 2 -8.23 32.5 -21.302 1 54.2 ? CAU 36J 301 B 1 HETATM 10 C CAS 36J . . . E 2 -8.885 33.226 -22.298 1 48.2 ? CAS 36J 301 B 1 HETATM 11 O OAD 36J . . . E 2 -8.49 32.975 -23.563 1 44.23 ? OAD 36J 301 B 1 HETATM 12 C CAH 36J . . . E 2 -9.87 34.164 -22.023 1 49.55 ? CAH 36J 301 B 1 HETATM 13 C CAR 36J . . . E 2 -10.21 34.41 -20.695 1 51.46 ? CAR 36J 301 B 1 HETATM 14 O OAC 36J . . . E 2 -11.163 35.339 -20.408 1 56.05 ? OAC 36J 301 B 1 HETATM 15 C CAI 36J . . . E 2 -9.584 33.698 -19.673 1 48.99 ? CAI 36J 301 B 1 HETATM 16 C CAT 36J . . . E 2 -8.611 32.728 -19.962 1 58.07 ? CAT 36J 301 B 1 HETATM 17 C CAG 36J . . . E 2 -8.007 32.058 -18.895 1 59.56 ? CAG 36J 301 B 1 HETATM 18 C CAF 36J . . . E 2 -8.776 31.632 -17.816 1 72.31 ? CAF 36J 301 B 1 HETATM 19 C CAJ 36J . . . E 2 -8.211 30.967 -16.739 1 76.55 ? CAJ 36J 301 B 1 HETATM 20 C CAK 36J . . . E 2 -7.212 31.845 -16.03 1 72.55 ? CAK 36J 301 B 1 HETATM 21 C CAN 36J . . . E 2 -5.949 31.06 -15.785 1 69.82 ? CAN 36J 301 B 1 HETATM 22 C CAW 36J . . . E 2 -4.866 31.481 -16.772 1 79.87 ? CAW 36J 301 B 1 HETATM 23 O OAE 36J . . . E 2 -3.629 31.571 -16.063 1 85.7 ? OAE 36J 301 B 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 23 #