data_5IEO # _model_server_result.job_id jua50yF1gtid_tWL_ZCeHQ _model_server_result.datetime_utc '2024-10-11 02:21:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ieo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 5IEO # _exptl.entry_id 5IEO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5IEO _cell.length_a 71.132 _cell.length_b 71.132 _cell.length_c 62.119 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IEO _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 5IEO _atom_sites.fract_transf_matrix[1][1] 0.014058 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014058 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016098 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 201 1 EDO EDO . C 2 EDO A 1 202 2 EDO EDO . D 2 EDO A 1 203 3 EDO EDO . E 2 EDO A 1 204 4 EDO EDO . F 2 EDO A 1 205 5 EDO EDO . G 3 VDY A 1 206 1 VDY VDY . H 4 HOH A 1 301 99 HOH HOH . H 4 HOH A 2 302 35 HOH HOH . H 4 HOH A 3 303 39 HOH HOH . H 4 HOH A 4 304 31 HOH HOH . H 4 HOH A 5 305 60 HOH HOH . H 4 HOH A 6 306 38 HOH HOH . H 4 HOH A 7 307 24 HOH HOH . H 4 HOH A 8 308 84 HOH HOH . H 4 HOH A 9 309 50 HOH HOH . H 4 HOH A 10 310 66 HOH HOH . H 4 HOH A 11 311 9 HOH HOH . H 4 HOH A 12 312 28 HOH HOH . H 4 HOH A 13 313 20 HOH HOH . H 4 HOH A 14 314 34 HOH HOH . H 4 HOH A 15 315 1 HOH HOH . H 4 HOH A 16 316 15 HOH HOH . H 4 HOH A 17 317 11 HOH HOH . H 4 HOH A 18 318 30 HOH HOH . H 4 HOH A 19 319 23 HOH HOH . H 4 HOH A 20 320 53 HOH HOH . H 4 HOH A 21 321 85 HOH HOH . H 4 HOH A 22 322 7 HOH HOH . H 4 HOH A 23 323 32 HOH HOH . H 4 HOH A 24 324 4 HOH HOH . H 4 HOH A 25 325 12 HOH HOH . H 4 HOH A 26 326 13 HOH HOH . H 4 HOH A 27 327 48 HOH HOH . H 4 HOH A 28 328 3 HOH HOH . H 4 HOH A 29 329 41 HOH HOH . H 4 HOH A 30 330 47 HOH HOH . H 4 HOH A 31 331 6 HOH HOH . H 4 HOH A 32 332 74 HOH HOH . H 4 HOH A 33 333 67 HOH HOH . H 4 HOH A 34 334 56 HOH HOH . H 4 HOH A 35 335 16 HOH HOH . H 4 HOH A 36 336 19 HOH HOH . H 4 HOH A 37 337 27 HOH HOH . H 4 HOH A 38 338 18 HOH HOH . H 4 HOH A 39 339 33 HOH HOH . H 4 HOH A 40 340 5 HOH HOH . H 4 HOH A 41 341 8 HOH HOH . H 4 HOH A 42 342 100 HOH HOH . H 4 HOH A 43 343 45 HOH HOH . H 4 HOH A 44 344 22 HOH HOH . H 4 HOH A 45 345 10 HOH HOH . H 4 HOH A 46 346 29 HOH HOH . H 4 HOH A 47 347 2 HOH HOH . H 4 HOH A 48 348 70 HOH HOH . H 4 HOH A 49 349 64 HOH HOH . H 4 HOH A 50 350 52 HOH HOH . H 4 HOH A 51 351 21 HOH HOH . H 4 HOH A 52 352 49 HOH HOH . H 4 HOH A 53 353 40 HOH HOH . H 4 HOH A 54 354 14 HOH HOH . H 4 HOH A 55 355 69 HOH HOH . H 4 HOH A 56 356 62 HOH HOH . H 4 HOH A 57 357 80 HOH HOH . H 4 HOH A 58 358 71 HOH HOH . H 4 HOH A 59 359 25 HOH HOH . H 4 HOH A 60 360 68 HOH HOH . H 4 HOH A 61 361 42 HOH HOH . H 4 HOH A 62 362 36 HOH HOH . H 4 HOH A 63 363 26 HOH HOH . H 4 HOH A 64 364 86 HOH HOH . H 4 HOH A 65 365 94 HOH HOH . H 4 HOH A 66 366 63 HOH HOH . H 4 HOH A 67 367 43 HOH HOH . H 4 HOH A 68 368 98 HOH HOH . H 4 HOH A 69 369 37 HOH HOH . H 4 HOH A 70 370 81 HOH HOH . H 4 HOH A 71 371 76 HOH HOH . H 4 HOH A 72 372 88 HOH HOH . H 4 HOH A 73 373 65 HOH HOH . H 4 HOH A 74 374 55 HOH HOH . H 4 HOH A 75 375 77 HOH HOH . H 4 HOH A 76 376 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 23.078 76.317 -5.845 1 39.05 ? C1 EDO 203 A 1 HETATM 2 O O1 EDO . . . D 2 24.461 76.551 -5.544 1 45.89 ? O1 EDO 203 A 1 HETATM 3 C C2 EDO . . . D 2 22.47 77.358 -6.775 1 47.33 ? C2 EDO 203 A 1 HETATM 4 O O2 EDO . . . D 2 22.843 77.064 -8.13 1 54.95 ? O2 EDO 203 A 1 HETATM 5 H H11 EDO . . . D 2 22.978 75.331 -6.304 1 46.86 ? H11 EDO 203 A 1 HETATM 6 H H12 EDO . . . D 2 22.51 76.301 -4.913 1 46.86 ? H12 EDO 203 A 1 HETATM 7 H HO1 EDO . . . D 2 24.784 75.858 -4.952 1 55.07 ? HO1 EDO 203 A 1 HETATM 8 H H21 EDO . . . D 2 21.382 77.348 -6.681 1 56.79 ? H21 EDO 203 A 1 HETATM 9 H H22 EDO . . . D 2 22.827 78.352 -6.501 1 56.79 ? H22 EDO 203 A 1 HETATM 10 H HO2 EDO . . . D 2 22.458 77.725 -8.721 1 65.94 ? HO2 EDO 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #