data_5IF6
#
_model_server_result.job_id            5l-LOBLsi91wetz-Ajdn7A 
_model_server_result.datetime_utc      '2024-10-12 14:25:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5if6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":201}' 
#
_entry.id    5IF6 
#
_exptl.entry_id    5IF6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              330.461 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (9beta)-17-hydroxypregn-4-ene-3,20-dione 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5IF6 
_cell.length_a            80.02 
_cell.length_b            100.787 
_cell.length_c            118.154 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5IF6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
? monomeric 1 author_defined_assembly 5 
? monomeric 1 author_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,G,H,P 1 1 
B,I,J,Q 2 1 
C,K,R 3 1 
D,L,M,S 4 1 
E,N,T 5 1 
F,O,U 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 I N N 
? 2 K N N 
? 2 L N N 
? 2 N N N 
? 2 O N N 
#
_chem_comp.formula           'C21 H30 O3' 
_chem_comp.formula_weight    330.461 
_chem_comp.id                3QZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (9beta)-17-hydroxypregn-4-ene-3,20-dione 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAP CAA 3QZ sing 1 n n 
CAA HAA 3QZ sing 2 n n 
CAA HAAA 3QZ sing 3 n n 
CAA HAAB 3QZ sing 4 n n 
CAB CAV 3QZ sing 5 n n 
CAB HAB 3QZ sing 6 n n 
CAB HABA 3QZ sing 7 n n 
CAB HABB 3QZ sing 8 n n 
CAC CAW 3QZ sing 9 n n 
CAC HAC 3QZ sing 10 n n 
CAC HACA 3QZ sing 11 n n 
CAC HACB 3QZ sing 12 n n 
OAD CAP 3QZ doub 13 n n 
CAQ OAE 3QZ doub 14 n n 
CAX OAF 3QZ sing 15 n n 
OAF HOAF 3QZ sing 16 n n 
CAQ CAG 3QZ sing 17 n n 
CAG CAR 3QZ doub 18 n n 
CAG HAG 3QZ sing 19 n n 
CAR CAH 3QZ sing 20 n n 
CAH CAJ 3QZ sing 21 n n 
CAH HAH 3QZ sing 22 n n 
CAH HAHA 3QZ sing 23 n n 
CAI CAM 3QZ sing 24 n n 
CAI CAQ 3QZ sing 25 n n 
CAI HAI 3QZ sing 26 n n 
CAI HAIA 3QZ sing 27 n n 
CAS CAJ 3QZ sing 28 n n 
CAJ HAJ 3QZ sing 29 n n 
CAJ HAJA 3QZ sing 30 n n 
CAK CAT 3QZ sing 31 n n 
CAK CAN 3QZ sing 32 n n 
CAK HAK 3QZ sing 33 n n 
CAK HAKA 3QZ sing 34 n n 
CAU CAL 3QZ sing 35 n n 
CAL CAO 3QZ sing 36 n n 
CAL HAL 3QZ sing 37 n n 
CAL HALA 3QZ sing 38 n n 
CAM CAV 3QZ sing 39 n n 
CAM HAM 3QZ sing 40 n n 
CAM HAMA 3QZ sing 41 n n 
CAN CAW 3QZ sing 42 n n 
CAN HAN 3QZ sing 43 n n 
CAN HANA 3QZ sing 44 n n 
CAX CAO 3QZ sing 45 n n 
CAO HAO 3QZ sing 46 n n 
CAO HAOA 3QZ sing 47 n n 
CAP CAX 3QZ sing 48 n n 
CAV CAR 3QZ sing 49 n n 
CAT CAS 3QZ sing 50 n n 
CAS CAU 3QZ sing 51 n n 
CAS HAS 3QZ sing 52 n n 
CAV CAT 3QZ sing 53 n n 
CAT HAT 3QZ sing 54 n n 
CAW CAU 3QZ sing 55 n n 
CAU HAU 3QZ sing 56 n n 
CAW CAX 3QZ sing 57 n n 
#
_atom_sites.entry_id                     5IF6 
_atom_sites.fract_transf_matrix[1][1]    0.012497 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009922 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008464 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 3QZ A 1 201 1 3QZ 3QZ . 
H 3 NA A 1 202 1 NA NA . 
I 2 3QZ B 1 201 2 3QZ 3QZ . 
J 3 NA B 1 202 2 NA NA . 
K 2 3QZ C 1 201 3 3QZ 3QZ . 
L 2 3QZ D 1 201 4 3QZ 3QZ . 
M 3 NA D 1 202 3 NA NA . 
N 2 3QZ E 1 201 5 3QZ 3QZ . 
O 2 3QZ F 1 201 6 3QZ 3QZ . 
P 4 HOH A 1 301 57 HOH HOH . 
P 4 HOH A 2 302 5 HOH HOH . 
P 4 HOH A 3 303 44 HOH HOH . 
P 4 HOH A 4 304 45 HOH HOH . 
P 4 HOH A 5 305 41 HOH HOH . 
P 4 HOH A 6 306 40 HOH HOH . 
P 4 HOH A 7 307 50 HOH HOH . 
P 4 HOH A 8 308 9 HOH HOH . 
P 4 HOH A 9 309 2 HOH HOH . 
P 4 HOH A 10 310 47 HOH HOH . 
P 4 HOH A 11 311 32 HOH HOH . 
P 4 HOH A 12 312 21 HOH HOH . 
P 4 HOH A 13 313 39 HOH HOH . 
P 4 HOH A 14 314 56 HOH HOH . 
P 4 HOH A 15 315 51 HOH HOH . 
Q 4 HOH B 1 301 29 HOH HOH . 
Q 4 HOH B 2 302 6 HOH HOH . 
Q 4 HOH B 3 303 3 HOH HOH . 
Q 4 HOH B 4 304 24 HOH HOH . 
Q 4 HOH B 5 305 12 HOH HOH . 
R 4 HOH C 1 301 27 HOH HOH . 
R 4 HOH C 2 302 4 HOH HOH . 
R 4 HOH C 3 303 20 HOH HOH . 
R 4 HOH C 4 304 38 HOH HOH . 
R 4 HOH C 5 305 10 HOH HOH . 
R 4 HOH C 6 306 34 HOH HOH . 
R 4 HOH C 7 307 14 HOH HOH . 
R 4 HOH C 8 308 18 HOH HOH . 
S 4 HOH D 1 301 1 HOH HOH . 
S 4 HOH D 2 302 13 HOH HOH . 
S 4 HOH D 3 303 22 HOH HOH . 
S 4 HOH D 4 304 8 HOH HOH . 
S 4 HOH D 5 305 15 HOH HOH . 
S 4 HOH D 6 306 23 HOH HOH . 
S 4 HOH D 7 307 53 HOH HOH . 
S 4 HOH D 8 308 33 HOH HOH . 
S 4 HOH D 9 309 36 HOH HOH . 
S 4 HOH D 10 310 35 HOH HOH . 
S 4 HOH D 11 311 46 HOH HOH . 
S 4 HOH D 12 312 55 HOH HOH . 
S 4 HOH D 13 313 25 HOH HOH . 
S 4 HOH D 14 314 17 HOH HOH . 
T 4 HOH E 1 301 43 HOH HOH . 
T 4 HOH E 2 302 28 HOH HOH . 
T 4 HOH E 3 303 7 HOH HOH . 
U 4 HOH F 1 301 37 HOH HOH . 
U 4 HOH F 2 302 26 HOH HOH . 
U 4 HOH F 3 303 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA 3QZ . . . L 2 -21.432 4.571 17.26 1 58.66 ? CAA 3QZ 201 D 1 
HETATM 2 C CAB 3QZ . . . L 2 -24.306 11.184 20.865 1 57.15 ? CAB 3QZ 201 D 1 
HETATM 3 C CAC 3QZ . . . L 2 -23.307 6.461 20.07 1 51.05 ? CAC 3QZ 201 D 1 
HETATM 4 O OAD 3QZ . . . L 2 -22.824 3.644 18.963 1 61.05 ? OAD 3QZ 201 D 1 
HETATM 5 O OAE 3QZ . . . L 2 -26.596 14.658 18.023 1 64.12 ? OAE 3QZ 201 D 1 
HETATM 6 O OAF 3QZ . . . L 2 -23.619 5.765 16.373 1 57.84 ? OAF 3QZ 201 D 1 
HETATM 7 C CAG 3QZ . . . L 2 -26.886 12.511 18.946 1 64.06 ? CAG 3QZ 201 D 1 
HETATM 8 C CAH 3QZ . . . L 2 -27.215 10.243 19.798 1 53.06 ? CAH 3QZ 201 D 1 
HETATM 9 C CAI 3QZ . . . L 2 -24.595 13.619 18.823 1 58.49 ? CAI 3QZ 201 D 1 
HETATM 10 C CAJ 3QZ . . . L 2 -26.904 9.019 18.956 1 59.97 ? CAJ 3QZ 201 D 1 
HETATM 11 C CAK 3QZ . . . L 2 -23.014 9.256 18.742 1 55.66 ? CAK 3QZ 201 D 1 
HETATM 12 C CAL 3QZ . . . L 2 -25.976 6.043 18.729 1 58.87 ? CAL 3QZ 201 D 1 
HETATM 13 C CAM 3QZ . . . L 2 -24.079 12.213 18.568 1 55.24 ? CAM 3QZ 201 D 1 
HETATM 14 C CAN 3QZ . . . L 2 -22.781 7.9 18.049 1 50.69 ? CAN 3QZ 201 D 1 
HETATM 15 C CAO 3QZ . . . L 2 -25.21 4.933 17.987 1 57.31 ? CAO 3QZ 201 D 1 
HETATM 16 C CAP 3QZ . . . L 2 -22.694 4.488 18.076 1 58.62 ? CAP 3QZ 201 D 1 
HETATM 17 C CAQ 3QZ . . . L 2 -26.07 13.682 18.554 1 60.66 ? CAQ 3QZ 201 D 1 
HETATM 18 C CAR 3QZ . . . L 2 -26.314 11.389 19.413 1 61.92 ? CAR 3QZ 201 D 1 
HETATM 19 C CAS 3QZ . . . L 2 -25.459 8.579 19.193 1 58.43 ? CAS 3QZ 201 D 1 
HETATM 20 C CAT 3QZ . . . L 2 -24.502 9.714 18.713 1 58.37 ? CAT 3QZ 201 D 1 
HETATM 21 C CAU 3QZ . . . L 2 -25.15 7.287 18.428 1 58.04 ? CAU 3QZ 201 D 1 
HETATM 22 C CAV 3QZ . . . L 2 -24.801 11.112 19.4 1 60 ? CAV 3QZ 201 D 1 
HETATM 23 C CAW 3QZ . . . L 2 -23.696 6.789 18.597 1 54.03 ? CAW 3QZ 201 D 1 
HETATM 24 C CAX 3QZ . . . L 2 -23.777 5.48 17.759 1 58.72 ? CAX 3QZ 201 D 1 
HETATM 25 H HAA 3QZ . . . L 2 -21.599 4.148 16.267 1 70.4 ? HAA 3QZ 201 D 1 
HETATM 26 H HAAA 3QZ . . . L 2 -20.606 4.059 17.756 1 70.4 ? HAAA 3QZ 201 D 1 
HETATM 27 H HAAB 3QZ . . . L 2 -21.151 5.623 17.145 1 70.4 ? HAAB 3QZ 201 D 1 
HETATM 28 H HAB 3QZ . . . L 2 -24.237 12.218 21.218 1 68.57 ? HAB 3QZ 201 D 1 
HETATM 29 H HABA 3QZ . . . L 2 -23.307 10.744 20.974 1 68.57 ? HABA 3QZ 201 D 1 
HETATM 30 H HABB 3QZ . . . L 2 -24.964 10.645 21.552 1 68.57 ? HABB 3QZ 201 D 1 
HETATM 31 H HAC 3QZ . . . L 2 -23.394 7.353 20.7 1 61.26 ? HAC 3QZ 201 D 1 
HETATM 32 H HACA 3QZ . . . L 2 -22.275 6.111 20.168 1 61.26 ? HACA 3QZ 201 D 1 
HETATM 33 H HACB 3QZ . . . L 2 -23.943 5.687 20.511 1 61.26 ? HACB 3QZ 201 D 1 
HETATM 34 H HOAF 3QZ . . . L 2 -23.714 4.934 15.876 1 69.4 ? HOAF 3QZ 201 D 1 
HETATM 35 H HAG 3QZ . . . L 2 -27.963 12.644 18.932 1 76.87 ? HAG 3QZ 201 D 1 
HETATM 36 H HAH 3QZ . . . L 2 -28.261 10.539 19.653 1 63.68 ? HAH 3QZ 201 D 1 
HETATM 37 H HAHA 3QZ . . . L 2 -27.107 9.983 20.859 1 63.68 ? HAHA 3QZ 201 D 1 
HETATM 38 H HAI 3QZ . . . L 2 -24.42 13.883 19.872 1 70.19 ? HAI 3QZ 201 D 1 
HETATM 39 H HAIA 3QZ . . . L 2 -24.089 14.36 18.195 1 70.19 ? HAIA 3QZ 201 D 1 
HETATM 40 H HAJ 3QZ . . . L 2 -27.061 9.266 17.9 1 71.96 ? HAJ 3QZ 201 D 1 
HETATM 41 H HAJA 3QZ . . . L 2 -27.598 8.206 19.205 1 71.96 ? HAJA 3QZ 201 D 1 
HETATM 42 H HAK 3QZ . . . L 2 -22.372 10.011 18.279 1 66.79 ? HAK 3QZ 201 D 1 
HETATM 43 H HAKA 3QZ . . . L 2 -22.673 9.159 19.78 1 66.79 ? HAKA 3QZ 201 D 1 
HETATM 44 H HAL 3QZ . . . L 2 -26.037 5.837 19.802 1 70.65 ? HAL 3QZ 201 D 1 
HETATM 45 H HALA 3QZ . . . L 2 -26.998 6.132 18.345 1 70.65 ? HALA 3QZ 201 D 1 
HETATM 46 H HAM 3QZ . . . L 2 -24.202 11.998 17.498 1 66.29 ? HAM 3QZ 201 D 1 
HETATM 47 H HAMA 3QZ . . . L 2 -23.001 12.2 18.764 1 66.29 ? HAMA 3QZ 201 D 1 
HETATM 48 H HAN 3QZ . . . L 2 -22.943 8.039 16.974 1 60.83 ? HAN 3QZ 201 D 1 
HETATM 49 H HANA 3QZ . . . L 2 -21.728 7.624 18.172 1 60.83 ? HANA 3QZ 201 D 1 
HETATM 50 H HAO 3QZ . . . L 2 -25.739 4.699 17.057 1 68.77 ? HAO 3QZ 201 D 1 
HETATM 51 H HAOA 3QZ . . . L 2 -25.201 4.021 18.594 1 68.77 ? HAOA 3QZ 201 D 1 
HETATM 52 H HAS 3QZ . . . L 2 -25.332 8.408 20.267 1 70.12 ? HAS 3QZ 201 D 1 
HETATM 53 H HAT 3QZ . . . L 2 -24.734 9.852 17.645 1 70.04 ? HAT 3QZ 201 D 1 
HETATM 54 H HAU 3QZ . . . L 2 -25.319 7.512 17.361 1 69.65 ? HAU 3QZ 201 D 1 
#
_model_server_stats.io_time_ms              45 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           54 
#