data_5IGL # _model_server_result.job_id MfXeOywwk3-1E0VBztWtog _model_server_result.datetime_utc '2024-11-23 06:45:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5igl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1701}' # _entry.id 5IGL # _exptl.entry_id 5IGL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.444 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Bromosporine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5IGL _cell.length_a 44.172 _cell.length_b 89.177 _cell.length_c 117.892 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IGL _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 139 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 1638 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 139 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 1638 _struct_conn.ptnr2_symmetry 7_556 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.09 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C17 H20 N6 O4 S' _chem_comp.formula_weight 404.444 _chem_comp.id BMF _chem_comp.mon_nstd_flag . _chem_comp.name Bromosporine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ethyl (3-methyl-6-{4-methyl-3-[(methylsulfonyl)amino]phenyl}[1,2,4]triazolo[4,3-b]pyridazin-8-yl)carbamate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C06 S05 BMF sing 70 n n O08 S05 BMF doub 71 n n S05 O07 BMF doub 72 n n S05 N04 BMF sing 73 n n N04 C03 BMF sing 74 n n C01 C02 BMF sing 75 n n C03 C02 BMF doub 76 n y C03 C09 BMF sing 77 n y C02 C28 BMF sing 78 n y C09 C10 BMF doub 79 n y C28 C27 BMF doub 80 n y C10 C27 BMF sing 81 n y C10 C11 BMF sing 82 n n O21 C17 BMF doub 83 n n C19 C20 BMF sing 84 n n C19 O18 BMF sing 85 n n C22 C11 BMF sing 86 n y C22 C15 BMF doub 87 n y C11 N12 BMF doub 88 n y C17 O18 BMF sing 89 n n C17 N16 BMF sing 90 n n C15 N16 BMF sing 91 n n C15 C14 BMF sing 92 n y N12 N13 BMF sing 93 n y N13 C14 BMF sing 94 n y N13 C25 BMF sing 95 n y C14 N23 BMF doub 96 n y C25 C26 BMF sing 97 n n C25 N24 BMF doub 98 n y N23 N24 BMF sing 99 n y C20 H1 BMF sing 100 n n C20 H2 BMF sing 101 n n C20 H3 BMF sing 102 n n C22 H4 BMF sing 103 n n C26 H5 BMF sing 104 n n C26 H6 BMF sing 105 n n C26 H7 BMF sing 106 n n C28 H8 BMF sing 107 n n C01 H9 BMF sing 108 n n C01 H10 BMF sing 109 n n C01 H11 BMF sing 110 n n N04 H12 BMF sing 111 n n C06 H13 BMF sing 112 n n C06 H14 BMF sing 113 n n C06 H15 BMF sing 114 n n C09 H16 BMF sing 115 n n N16 H17 BMF sing 116 n n C19 H18 BMF sing 117 n n C19 H19 BMF sing 118 n n C27 H20 BMF sing 119 n n # _atom_sites.entry_id 5IGL _atom_sites.fract_transf_matrix[1][1] 0.022639 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011214 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008482 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BMF A 1 1701 1 BMF DRG . C 3 HOH A 1 1801 2 HOH HOH . C 3 HOH A 2 1802 13 HOH HOH . C 3 HOH A 3 1803 23 HOH HOH . C 3 HOH A 4 1804 14 HOH HOH . C 3 HOH A 5 1805 17 HOH HOH . C 3 HOH A 6 1806 21 HOH HOH . C 3 HOH A 7 1807 16 HOH HOH . C 3 HOH A 8 1808 3 HOH HOH . C 3 HOH A 9 1809 25 HOH HOH . C 3 HOH A 10 1810 4 HOH HOH . C 3 HOH A 11 1811 7 HOH HOH . C 3 HOH A 12 1812 15 HOH HOH . C 3 HOH A 13 1813 8 HOH HOH . C 3 HOH A 14 1814 1 HOH HOH . C 3 HOH A 15 1815 12 HOH HOH . C 3 HOH A 16 1816 5 HOH HOH . C 3 HOH A 17 1817 11 HOH HOH . C 3 HOH A 18 1818 24 HOH HOH . C 3 HOH A 19 1819 20 HOH HOH . C 3 HOH A 20 1820 10 HOH HOH . C 3 HOH A 21 1821 19 HOH HOH . C 3 HOH A 22 1822 6 HOH HOH . C 3 HOH A 23 1823 18 HOH HOH . C 3 HOH A 24 1824 22 HOH HOH . C 3 HOH A 25 1825 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 BMF . . . B 2 2.586 24.143 28.507 1 83.91 ? C10 BMF 1701 A 1 HETATM 2 N N12 BMF . . . B 2 3.461 26.408 28.653 1 78.19 ? N12 BMF 1701 A 1 HETATM 3 C C15 BMF . . . B 2 3.066 27.06 26.09 1 98.53 ? C15 BMF 1701 A 1 HETATM 4 C C17 BMF . . . B 2 2.965 26.905 23.648 1 125.08 ? C17 BMF 1701 A 1 HETATM 5 C C20 BMF . . . B 2 0.625 27.34 21.715 1 70.64 ? C20 BMF 1701 A 1 HETATM 6 C C22 BMF . . . B 2 2.701 25.776 26.554 1 84.43 ? C22 BMF 1701 A 1 HETATM 7 C C26 BMF . . . B 2 4.659 28.646 30.241 1 47.8 ? C26 BMF 1701 A 1 HETATM 8 C C28 BMF . . . B 2 1.574 21.936 28.31 1 68.47 ? C28 BMF 1701 A 1 HETATM 9 C C01 BMF . . . B 2 1.442 20.395 30.04 1 64.11 ? C01 BMF 1701 A 1 HETATM 10 C C02 BMF . . . B 2 1.855 21.636 29.641 1 92.57 ? C02 BMF 1701 A 1 HETATM 11 C C03 BMF . . . B 2 2.517 22.563 30.484 1 60.13 ? C03 BMF 1701 A 1 HETATM 12 N N04 BMF . . . B 2 2.725 22.225 31.825 1 33.22 ? N04 BMF 1701 A 1 HETATM 13 S S05 BMF . . . B 2 4.328 21.99 32.316 1 50.34 ? S05 BMF 1701 A 1 HETATM 14 C C06 BMF . . . B 2 4.317 20.477 33.161 1 52.82 ? C06 BMF 1701 A 1 HETATM 15 O O07 BMF . . . B 2 4.731 23.121 33.299 1 73.43 ? O07 BMF 1701 A 1 HETATM 16 O O08 BMF . . . B 2 5.127 21.951 31.043 1 45.07 ? O08 BMF 1701 A 1 HETATM 17 C C09 BMF . . . B 2 2.859 23.81 29.885 1 63.83 ? C09 BMF 1701 A 1 HETATM 18 C C11 BMF . . . B 2 2.921 25.413 27.909 1 100.25 ? C11 BMF 1701 A 1 HETATM 19 N N13 BMF . . . B 2 3.75 27.518 28.201 1 73.9 ? N13 BMF 1701 A 1 HETATM 20 C C14 BMF . . . B 2 3.591 27.928 26.971 1 114.55 ? C14 BMF 1701 A 1 HETATM 21 N N16 BMF . . . B 2 2.923 27.573 24.845 1 74.67 ? N16 BMF 1701 A 1 HETATM 22 O O18 BMF . . . B 2 2.829 27.644 22.489 1 86.66 ? O18 BMF 1701 A 1 HETATM 23 C C19 BMF . . . B 2 2.088 27.11 21.365 1 75.77 ? C19 BMF 1701 A 1 HETATM 24 O O21 BMF . . . B 2 3.117 25.684 23.563 1 75.82 ? O21 BMF 1701 A 1 HETATM 25 N N23 BMF . . . B 2 4.04 29.198 26.928 1 63.44 ? N23 BMF 1701 A 1 HETATM 26 N N24 BMF . . . B 2 4.437 29.551 27.903 1 78.33 ? N24 BMF 1701 A 1 HETATM 27 C C25 BMF . . . B 2 4.284 28.568 28.778 1 75.17 ? C25 BMF 1701 A 1 HETATM 28 C C27 BMF . . . B 2 1.932 23.151 27.753 1 77.05 ? C27 BMF 1701 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #