# Name: GDP # Created by ModelServer 0.9.12 # model_server_result.job_id: 8-eakylPTcVy9bKdhC3VKA # model_server_result.datetime_utc: 2025-07-12 20:47:37 # model_server_result.server_version: 0.9.12 # model_server_result.query_name: ligand # model_server_result.source_id: pdb-bcif # model_server_result.entry_id: 5igv # model_server_params.name: atom_site # model_server_params.value: {"label_asym_id":"D","auth_seq_id":403} # model_server_stats.io_time_ms: 19 # model_server_stats.parse_time_ms: 9 # model_server_stats.create_model_time_ms: 15 # model_server_stats.query_time_ms: 260 # model_server_stats.encode_time_ms: 0 # model_server_stats.element_count: 40 @MOLECULE GDP 40 42 1 **** **** @ATOM 1 PB -0.691 -11.400 34.495 P.3 1 GDP 0.000 2 O1B 0.050 -12.401 33.628 O.2 1 GDP 0.000 3 O2B -1.120 -12.084 35.777 O.3 1 GDP 0.000 4 O3B -1.856 -10.848 33.734 O.3 1 GDP 0.000 5 O3A 0.364 -10.222 34.816 O.3 1 GDP 0.000 6 PA 0.065 -8.640 34.778 P.3 1 GDP 0.000 7 O1A -1.079 -8.192 33.891 O.2 1 GDP 0.000 8 O2A 1.338 -7.878 34.499 O.3 1 GDP 0.000 9 O5' -0.261 -8.402 36.322 O.3 1 GDP 0.000 10 C5' -1.397 -9.059 36.824 C.3 1 GDP 0.000 11 C4' -2.244 -7.993 37.452 C.3 1 GDP 0.000 12 O4' -1.393 -7.275 38.328 O.3 1 GDP 0.000 13 C3' -2.761 -6.993 36.430 C.3 1 GDP 0.000 14 O3' -3.993 -7.394 35.824 O.3 1 GDP 0.000 15 C2' -2.911 -5.743 37.252 C.3 1 GDP 0.000 16 O2' -4.153 -5.679 37.962 O.3 1 GDP 0.000 17 C1' -1.812 -5.932 38.272 C.3 1 GDP 0.000 18 N9 -0.662 -5.076 37.933 N.ar 1 GDP 0.000 19 C8 0.548 -5.369 37.452 C.ar 1 GDP 0.000 20 N7 1.282 -4.232 37.321 N.ar 1 GDP 0.000 21 C5 0.515 -3.209 37.727 C.ar 1 GDP 0.000 22 C6 0.654 -1.754 37.867 C.2 1 GDP 0.000 23 O6 1.690 -1.128 37.579 O.2 1 GDP 0.000 24 N1 -0.432 -1.110 38.352 N.am 1 GDP 0.000 25 C2 -1.580 -1.718 38.702 C.cat 1 GDP 0.000 26 N2 -2.623 -0.990 39.173 N.pl3 1 GDP 0.000 27 N3 -1.772 -3.032 38.601 N.2 1 GDP 0.000 28 C4 -0.760 -3.788 38.127 C.ar 1 GDP 0.000 29 H5' -1.941 -9.554 36.017 H 1 GDP 0.000 30 H5'' -1.110 -9.806 37.567 H 1 GDP 0.000 31 H4' -3.084 -8.447 37.996 H 1 GDP 0.000 32 H3' -1.992 -6.830 35.662 H 1 GDP 0.000 33 HO3' -4.268 -6.726 35.180 H 1 GDP 0.000 34 H2' -2.730 -4.846 36.644 H 1 GDP 0.000 35 HO2' -4.882 -5.619 37.330 H 1 GDP 0.000 36 H1' -2.205 -5.636 39.254 H 1 GDP 0.000 37 H8 0.893 -6.365 37.201 H 1 GDP 0.000 38 HN1 -0.377 -0.077 38.460 H 1 GDP 0.000 39 HN21 -3.483 -1.450 39.434 H 1 GDP 0.000 40 HN22 -2.538 0.012 39.268 H 1 GDP 0.000 @BOND 1 1 2 2 2 1 3 1 3 1 4 1 4 1 5 1 5 5 6 1 6 6 7 2 7 6 8 1 8 6 9 1 9 9 10 1 10 10 11 1 11 10 29 1 12 10 30 1 13 11 12 1 14 11 13 1 15 11 31 1 16 12 17 1 17 13 14 1 18 13 15 1 19 13 32 1 20 14 33 1 21 15 16 1 22 15 17 1 23 15 34 1 24 16 35 1 25 17 18 1 26 17 36 1 27 18 19 ar 28 18 28 ar 29 19 20 ar 30 19 37 1 31 20 21 ar 32 21 22 1 33 21 28 ar 34 22 23 2 35 22 24 1 36 24 25 1 37 24 38 1 38 25 26 1 39 25 27 2 40 26 39 1 41 26 40 1 42 27 28 1 @SUBSTRUCTURE 1 GDP 1