data_5IH5 # _model_server_result.job_id T7_SSjYkQImGADm9mzCzKw _model_server_result.datetime_utc '2024-11-04 11:10:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ih5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 5IH5 # _exptl.entry_id 5IH5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'S,R MESO-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5IH5 _cell.length_a 65.07 _cell.length_b 65.07 _cell.length_c 151.48 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IH5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 50 A HIS 50 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc2 A SG CYS 71 A CYS 71 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc3 A NE2 HIS 278 A HIS 278 1_555 B ZN ZN . A ZN 301 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 D O11 SRT . A SRT 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id SRT _chem_comp.mon_nstd_flag . _chem_comp.name 'S,R MESO-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 SRT sing 326 n n O1 H1 SRT sing 327 n n O11 C1 SRT doub 328 n n C1 C2 SRT sing 329 n n C2 O2 SRT sing 330 n n C2 C3 SRT sing 331 n n C2 H2 SRT sing 332 n n O2 HA SRT sing 333 n n C3 O3 SRT sing 334 n n C3 C4 SRT sing 335 n n C3 H3 SRT sing 336 n n O3 HB SRT sing 337 n n C4 O4 SRT doub 338 n n C4 O41 SRT sing 339 n n O41 H41 SRT sing 340 n n # _atom_sites.entry_id 5IH5 _atom_sites.fract_transf_matrix[1][1] 0.015368 _atom_sites.fract_transf_matrix[1][2] 0.008873 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017746 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006602 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 1 ZN ZN . C 3 AUE A 1 302 400 AUE AUE . D 4 SRT A 1 303 1 SRT SRT . E 5 SO4 A 1 304 1 SO4 SO4 . F 5 SO4 A 1 305 2 SO4 SO4 . G 6 HOH A 1 401 37 HOH HOH . G 6 HOH A 2 402 20 HOH HOH . G 6 HOH A 3 403 42 HOH HOH . G 6 HOH A 4 404 4 HOH HOH . G 6 HOH A 5 405 36 HOH HOH . G 6 HOH A 6 406 15 HOH HOH . G 6 HOH A 7 407 40 HOH HOH . G 6 HOH A 8 408 26 HOH HOH . G 6 HOH A 9 409 25 HOH HOH . G 6 HOH A 10 410 23 HOH HOH . G 6 HOH A 11 411 35 HOH HOH . G 6 HOH A 12 412 17 HOH HOH . G 6 HOH A 13 413 5 HOH HOH . G 6 HOH A 14 414 3 HOH HOH . G 6 HOH A 15 415 10 HOH HOH . G 6 HOH A 16 416 14 HOH HOH . G 6 HOH A 17 417 9 HOH HOH . G 6 HOH A 18 418 24 HOH HOH . G 6 HOH A 19 419 27 HOH HOH . G 6 HOH A 20 420 13 HOH HOH . G 6 HOH A 21 421 6 HOH HOH . G 6 HOH A 22 422 53 HOH HOH . G 6 HOH A 23 423 45 HOH HOH . G 6 HOH A 24 424 21 HOH HOH . G 6 HOH A 25 425 39 HOH HOH . G 6 HOH A 26 426 52 HOH HOH . G 6 HOH A 27 427 28 HOH HOH . G 6 HOH A 28 428 49 HOH HOH . G 6 HOH A 29 429 38 HOH HOH . G 6 HOH A 30 430 47 HOH HOH . G 6 HOH A 31 431 46 HOH HOH . G 6 HOH A 32 432 18 HOH HOH . G 6 HOH A 33 433 1 HOH HOH . G 6 HOH A 34 434 48 HOH HOH . G 6 HOH A 35 435 41 HOH HOH . G 6 HOH A 36 436 44 HOH HOH . G 6 HOH A 37 437 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 SRT . . . D 4 -30.397 13.979 -9.277 1 79.18 ? O1 SRT 303 A 1 HETATM 2 O O11 SRT . . . D 4 -30.075 14.167 -11.379 1 76.33 ? O11 SRT 303 A 1 HETATM 3 C C1 SRT . . . D 4 -29.957 13.541 -10.324 1 77.05 ? C1 SRT 303 A 1 HETATM 4 C C2 SRT . . . D 4 -29.212 12.271 -10.219 1 79.84 ? C2 SRT 303 A 1 HETATM 5 O O2 SRT . . . D 4 -30.067 11.169 -10.377 1 83.83 ? O2 SRT 303 A 1 HETATM 6 C C3 SRT . . . D 4 -28.169 12.265 -11.3 1 83.68 ? C3 SRT 303 A 1 HETATM 7 O O3 SRT . . . D 4 -27.338 13.365 -10.927 1 85.77 ? O3 SRT 303 A 1 HETATM 8 C C4 SRT . . . D 4 -27.349 11.018 -11.318 1 86.93 ? C4 SRT 303 A 1 HETATM 9 O O4 SRT . . . D 4 -27.575 10.18 -12.206 1 89.81 ? O4 SRT 303 A 1 HETATM 10 O O41 SRT . . . D 4 -26.448 10.846 -10.461 1 89.91 ? O41 SRT 303 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 363 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #