data_5IH6 # _model_server_result.job_id XjFzPlOAFJOwXNdB9Cc3fQ _model_server_result.datetime_utc '2025-01-02 23:33:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ih6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5IH6 # _exptl.entry_id 5IH6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'S,R MESO-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5IH6 _cell.length_a 65.72 _cell.length_b 65.72 _cell.length_c 151.72 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IH6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 50 A HIS 50 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc2 A SG CYS 71 A CYS 71 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc3 A NE2 HIS 278 A HIS 278 1_555 B ZN ZN . A ZN 301 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C O1 SRT . A SRT 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc5 B ZN ZN . A ZN 301 1_555 C O11 SRT . A SRT 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id SRT _chem_comp.mon_nstd_flag . _chem_comp.name 'S,R MESO-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 SRT sing 326 n n O1 H1 SRT sing 327 n n O11 C1 SRT doub 328 n n C1 C2 SRT sing 329 n n C2 O2 SRT sing 330 n n C2 C3 SRT sing 331 n n C2 H2 SRT sing 332 n n O2 HA SRT sing 333 n n C3 O3 SRT sing 334 n n C3 C4 SRT sing 335 n n C3 H3 SRT sing 336 n n O3 HB SRT sing 337 n n C4 O4 SRT doub 338 n n C4 O41 SRT sing 339 n n O41 H41 SRT sing 340 n n # _atom_sites.entry_id 5IH6 _atom_sites.fract_transf_matrix[1][1] 0.015216 _atom_sites.fract_transf_matrix[1][2] 0.008785 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01757 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006591 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 1 ZN ZN . C 3 SRT A 1 302 1 SRT SRT . D 4 SO4 A 1 303 1 SO4 SO4 . E 4 SO4 A 1 304 2 SO4 SO4 . F 5 AUG A 1 305 400 AUG AUG . G 6 HOH A 1 401 2 HOH HOH . G 6 HOH A 2 402 11 HOH HOH . G 6 HOH A 3 403 7 HOH HOH . G 6 HOH A 4 404 15 HOH HOH . G 6 HOH A 5 405 17 HOH HOH . G 6 HOH A 6 406 20 HOH HOH . G 6 HOH A 7 407 4 HOH HOH . G 6 HOH A 8 408 22 HOH HOH . G 6 HOH A 9 409 8 HOH HOH . G 6 HOH A 10 410 13 HOH HOH . G 6 HOH A 11 411 9 HOH HOH . G 6 HOH A 12 412 10 HOH HOH . G 6 HOH A 13 413 1 HOH HOH . G 6 HOH A 14 414 18 HOH HOH . G 6 HOH A 15 415 5 HOH HOH . G 6 HOH A 16 416 16 HOH HOH . G 6 HOH A 17 417 14 HOH HOH . G 6 HOH A 18 418 12 HOH HOH . G 6 HOH A 19 419 21 HOH HOH . G 6 HOH A 20 420 19 HOH HOH . G 6 HOH A 21 421 6 HOH HOH . G 6 HOH A 22 422 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 SRT . . . C 3 -29.54 14.774 -9.67 1 99.81 ? O1 SRT 302 A 1 HETATM 2 O O11 SRT . . . C 3 -30.939 14.104 -11.111 1 65.38 ? O11 SRT 302 A 1 HETATM 3 C C1 SRT . . . C 3 -29.966 13.887 -10.393 1 81.29 ? C1 SRT 302 A 1 HETATM 4 C C2 SRT . . . C 3 -29.265 12.566 -10.322 1 91.52 ? C2 SRT 302 A 1 HETATM 5 O O2 SRT . . . C 3 -30.043 11.532 -10.919 1 84.41 ? O2 SRT 302 A 1 HETATM 6 C C3 SRT . . . C 3 -27.931 12.656 -11.06 1 101.84 ? C3 SRT 302 A 1 HETATM 7 O O3 SRT . . . C 3 -27.055 13.654 -10.49 1 109.54 ? O3 SRT 302 A 1 HETATM 8 C C4 SRT . . . C 3 -27.241 11.32 -11.019 1 104.8 ? C4 SRT 302 A 1 HETATM 9 O O4 SRT . . . C 3 -27.654 10.454 -11.839 1 94.88 ? O4 SRT 302 A 1 HETATM 10 O O41 SRT . . . C 3 -26.304 11.15 -10.18 1 115.88 ? O41 SRT 302 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 10 #