data_5IJ6
#
_model_server_result.job_id            b3eBYYeSAa7fjo2mfX3dEg 
_model_server_result.datetime_utc      '2024-11-22 00:24:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ij6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    5IJ6 
#
_exptl.entry_id    5IJ6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              206.326 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LIPOIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5IJ6 
_cell.length_a            53.011 
_cell.length_b            70.912 
_cell.length_c            106.466 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5IJ6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C8 H14 O2 S2' 
_chem_comp.formula_weight    206.326 
_chem_comp.id                LPA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LIPOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '5-[(3R)-1,2-dithiolan-3-yl]pentanoic acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C1 LPA sing 194 n n 
C1 O2 LPA doub 195 n n 
C1 O1 LPA sing 196 n n 
O1 HO1 LPA sing 197 n n 
C3 C2 LPA sing 198 n n 
C2 H2 LPA sing 199 n n 
C2 H2A LPA sing 200 n n 
C4 C3 LPA sing 201 n n 
C3 H3 LPA sing 202 n n 
C3 H3A LPA sing 203 n n 
C5 C4 LPA sing 204 n n 
C4 H4 LPA sing 205 n n 
C4 H4A LPA sing 206 n n 
C6 C5 LPA sing 207 n n 
C5 H5 LPA sing 208 n n 
C5 H5A LPA sing 209 n n 
C7 C6 LPA sing 210 n n 
C6 S6 LPA sing 211 n n 
C6 H6 LPA sing 212 n n 
S8 S6 LPA sing 213 n n 
C8 C7 LPA sing 214 n n 
C7 H7 LPA sing 215 n n 
C7 H7A LPA sing 216 n n 
C8 S8 LPA sing 217 n n 
C8 H8 LPA sing 218 n n 
C8 H8A LPA sing 219 n n 
#
_atom_sites.entry_id                     5IJ6 
_atom_sites.fract_transf_matrix[1][1]    0.018864 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014102 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009393 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 LPA A 1 401 1 LPA LPA . 
C 3 SO4 A 1 402 1 SO4 SO4 . 
D 4 CL A 1 403 1 CL CL . 
E 5 HOH A 1 501 143 HOH HOH . 
E 5 HOH A 2 502 10 HOH HOH . 
E 5 HOH A 3 503 14 HOH HOH . 
E 5 HOH A 4 504 37 HOH HOH . 
E 5 HOH A 5 505 46 HOH HOH . 
E 5 HOH A 6 506 57 HOH HOH . 
E 5 HOH A 7 507 59 HOH HOH . 
E 5 HOH A 8 508 15 HOH HOH . 
E 5 HOH A 9 509 5 HOH HOH . 
E 5 HOH A 10 510 47 HOH HOH . 
E 5 HOH A 11 511 45 HOH HOH . 
E 5 HOH A 12 512 12 HOH HOH . 
E 5 HOH A 13 513 171 HOH HOH . 
E 5 HOH A 14 514 156 HOH HOH . 
E 5 HOH A 15 515 101 HOH HOH . 
E 5 HOH A 16 516 76 HOH HOH . 
E 5 HOH A 17 517 60 HOH HOH . 
E 5 HOH A 18 518 130 HOH HOH . 
E 5 HOH A 19 519 9 HOH HOH . 
E 5 HOH A 20 520 88 HOH HOH . 
E 5 HOH A 21 521 139 HOH HOH . 
E 5 HOH A 22 522 98 HOH HOH . 
E 5 HOH A 23 523 150 HOH HOH . 
E 5 HOH A 24 524 55 HOH HOH . 
E 5 HOH A 25 525 170 HOH HOH . 
E 5 HOH A 26 526 79 HOH HOH . 
E 5 HOH A 27 527 117 HOH HOH . 
E 5 HOH A 28 528 39 HOH HOH . 
E 5 HOH A 29 529 56 HOH HOH . 
E 5 HOH A 30 530 8 HOH HOH . 
E 5 HOH A 31 531 84 HOH HOH . 
E 5 HOH A 32 532 6 HOH HOH . 
E 5 HOH A 33 533 22 HOH HOH . 
E 5 HOH A 34 534 24 HOH HOH . 
E 5 HOH A 35 535 52 HOH HOH . 
E 5 HOH A 36 536 87 HOH HOH . 
E 5 HOH A 37 537 100 HOH HOH . 
E 5 HOH A 38 538 105 HOH HOH . 
E 5 HOH A 39 539 149 HOH HOH . 
E 5 HOH A 40 540 20 HOH HOH . 
E 5 HOH A 41 541 34 HOH HOH . 
E 5 HOH A 42 542 91 HOH HOH . 
E 5 HOH A 43 543 125 HOH HOH . 
E 5 HOH A 44 544 41 HOH HOH . 
E 5 HOH A 45 545 40 HOH HOH . 
E 5 HOH A 46 546 66 HOH HOH . 
E 5 HOH A 47 547 94 HOH HOH . 
E 5 HOH A 48 548 65 HOH HOH . 
E 5 HOH A 49 549 89 HOH HOH . 
E 5 HOH A 50 550 28 HOH HOH . 
E 5 HOH A 51 551 11 HOH HOH . 
E 5 HOH A 52 552 68 HOH HOH . 
E 5 HOH A 53 553 75 HOH HOH . 
E 5 HOH A 54 554 1 HOH HOH . 
E 5 HOH A 55 555 63 HOH HOH . 
E 5 HOH A 56 556 82 HOH HOH . 
E 5 HOH A 57 557 172 HOH HOH . 
E 5 HOH A 58 558 58 HOH HOH . 
E 5 HOH A 59 559 107 HOH HOH . 
E 5 HOH A 60 560 128 HOH HOH . 
E 5 HOH A 61 561 44 HOH HOH . 
E 5 HOH A 62 562 99 HOH HOH . 
E 5 HOH A 63 563 123 HOH HOH . 
E 5 HOH A 64 564 95 HOH HOH . 
E 5 HOH A 65 565 115 HOH HOH . 
E 5 HOH A 66 566 122 HOH HOH . 
E 5 HOH A 67 567 161 HOH HOH . 
E 5 HOH A 68 568 72 HOH HOH . 
E 5 HOH A 69 569 152 HOH HOH . 
E 5 HOH A 70 570 83 HOH HOH . 
E 5 HOH A 71 571 67 HOH HOH . 
E 5 HOH A 72 572 64 HOH HOH . 
E 5 HOH A 73 573 110 HOH HOH . 
E 5 HOH A 74 574 167 HOH HOH . 
E 5 HOH A 75 575 159 HOH HOH . 
E 5 HOH A 76 576 18 HOH HOH . 
E 5 HOH A 77 577 133 HOH HOH . 
E 5 HOH A 78 578 26 HOH HOH . 
E 5 HOH A 79 579 103 HOH HOH . 
E 5 HOH A 80 580 121 HOH HOH . 
E 5 HOH A 81 581 32 HOH HOH . 
E 5 HOH A 82 582 166 HOH HOH . 
E 5 HOH A 83 583 78 HOH HOH . 
E 5 HOH A 84 584 35 HOH HOH . 
E 5 HOH A 85 585 7 HOH HOH . 
E 5 HOH A 86 586 119 HOH HOH . 
E 5 HOH A 87 587 112 HOH HOH . 
E 5 HOH A 88 588 96 HOH HOH . 
E 5 HOH A 89 589 31 HOH HOH . 
E 5 HOH A 90 590 136 HOH HOH . 
E 5 HOH A 91 591 21 HOH HOH . 
E 5 HOH A 92 592 29 HOH HOH . 
E 5 HOH A 93 593 23 HOH HOH . 
E 5 HOH A 94 594 160 HOH HOH . 
E 5 HOH A 95 595 61 HOH HOH . 
E 5 HOH A 96 596 74 HOH HOH . 
E 5 HOH A 97 597 169 HOH HOH . 
E 5 HOH A 98 598 27 HOH HOH . 
E 5 HOH A 99 599 173 HOH HOH . 
E 5 HOH A 100 600 62 HOH HOH . 
E 5 HOH A 101 601 90 HOH HOH . 
E 5 HOH A 102 602 132 HOH HOH . 
E 5 HOH A 103 603 148 HOH HOH . 
E 5 HOH A 104 604 43 HOH HOH . 
E 5 HOH A 105 605 19 HOH HOH . 
E 5 HOH A 106 606 81 HOH HOH . 
E 5 HOH A 107 607 77 HOH HOH . 
E 5 HOH A 108 608 118 HOH HOH . 
E 5 HOH A 109 609 38 HOH HOH . 
E 5 HOH A 110 610 157 HOH HOH . 
E 5 HOH A 111 611 153 HOH HOH . 
E 5 HOH A 112 612 30 HOH HOH . 
E 5 HOH A 113 613 127 HOH HOH . 
E 5 HOH A 114 614 53 HOH HOH . 
E 5 HOH A 115 615 141 HOH HOH . 
E 5 HOH A 116 616 131 HOH HOH . 
E 5 HOH A 117 617 109 HOH HOH . 
E 5 HOH A 118 618 174 HOH HOH . 
E 5 HOH A 119 619 104 HOH HOH . 
E 5 HOH A 120 620 102 HOH HOH . 
E 5 HOH A 121 621 154 HOH HOH . 
E 5 HOH A 122 622 140 HOH HOH . 
E 5 HOH A 123 623 36 HOH HOH . 
E 5 HOH A 124 624 51 HOH HOH . 
E 5 HOH A 125 625 71 HOH HOH . 
E 5 HOH A 126 626 145 HOH HOH . 
E 5 HOH A 127 627 4 HOH HOH . 
E 5 HOH A 128 628 120 HOH HOH . 
E 5 HOH A 129 629 129 HOH HOH . 
E 5 HOH A 130 630 108 HOH HOH . 
E 5 HOH A 131 631 50 HOH HOH . 
E 5 HOH A 132 632 13 HOH HOH . 
E 5 HOH A 133 633 164 HOH HOH . 
E 5 HOH A 134 634 80 HOH HOH . 
E 5 HOH A 135 635 73 HOH HOH . 
E 5 HOH A 136 636 70 HOH HOH . 
E 5 HOH A 137 637 92 HOH HOH . 
E 5 HOH A 138 638 155 HOH HOH . 
E 5 HOH A 139 639 113 HOH HOH . 
E 5 HOH A 140 640 111 HOH HOH . 
E 5 HOH A 141 641 158 HOH HOH . 
E 5 HOH A 142 642 33 HOH HOH . 
E 5 HOH A 143 643 165 HOH HOH . 
E 5 HOH A 144 644 17 HOH HOH . 
E 5 HOH A 145 645 175 HOH HOH . 
E 5 HOH A 146 646 49 HOH HOH . 
E 5 HOH A 147 647 106 HOH HOH . 
E 5 HOH A 148 648 176 HOH HOH . 
E 5 HOH A 149 649 69 HOH HOH . 
E 5 HOH A 150 650 48 HOH HOH . 
E 5 HOH A 151 651 178 HOH HOH . 
E 5 HOH A 152 652 116 HOH HOH . 
E 5 HOH A 153 653 151 HOH HOH . 
E 5 HOH A 154 654 147 HOH HOH . 
E 5 HOH A 155 655 168 HOH HOH . 
E 5 HOH A 156 656 124 HOH HOH . 
E 5 HOH A 157 657 114 HOH HOH . 
E 5 HOH A 158 658 162 HOH HOH . 
E 5 HOH A 159 659 16 HOH HOH . 
E 5 HOH A 160 660 177 HOH HOH . 
E 5 HOH A 161 661 163 HOH HOH . 
E 5 HOH A 162 662 25 HOH HOH . 
E 5 HOH A 163 663 138 HOH HOH . 
E 5 HOH A 164 664 144 HOH HOH . 
E 5 HOH A 165 665 54 HOH HOH . 
E 5 HOH A 166 666 85 HOH HOH . 
E 5 HOH A 167 667 86 HOH HOH . 
E 5 HOH A 168 668 2 HOH HOH . 
E 5 HOH A 169 669 126 HOH HOH . 
E 5 HOH A 170 670 135 HOH HOH . 
E 5 HOH A 171 671 93 HOH HOH . 
E 5 HOH A 172 672 134 HOH HOH . 
E 5 HOH A 173 673 142 HOH HOH . 
E 5 HOH A 174 674 146 HOH HOH . 
E 5 HOH A 175 675 137 HOH HOH . 
E 5 HOH A 176 676 3 HOH HOH . 
E 5 HOH A 177 677 42 HOH HOH . 
E 5 HOH A 178 678 97 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 LPA . . . B 2 62.085 71.892 124.017 1 42.96 ? C1 LPA 401 A 1 
HETATM 2 O O1 LPA . . . B 2 62.218 70.649 124.169 1 36.48 ? O1 LPA 401 A 1 
HETATM 3 C C2 LPA . . . B 2 62.439 72.803 125.171 1 24.98 ? C2 LPA 401 A 1 
HETATM 4 O O2 LPA . . . B 2 61.672 72.428 122.933 1 31.16 ? O2 LPA 401 A 1 
HETATM 5 C C3 LPA . . . B 2 63.116 72.074 126.332 1 25.12 ? C3 LPA 401 A 1 
HETATM 6 C C4 LPA . . . B 2 63.563 73.061 127.416 1 22.62 ? C4 LPA 401 A 1 
HETATM 7 C C5 LPA . . . B 2 64.13 72.37 128.65 1 21.59 ? C5 LPA 401 A 1 
HETATM 8 C C6 LPA . . . B 2 64.37 73.385 129.792 1 24.27 ? C6 LPA 401 A 1 
HETATM 9 S S6 LPA . . . B 2 62.877 74.08 130.485 1 28.49 ? S6 LPA 401 A 1 
HETATM 10 C C7 LPA . . . B 2 65.127 72.745 130.977 1 28.16 ? C7 LPA 401 A 1 
HETATM 11 C C8 LPA . . . B 2 65.213 73.715 132.18 1 28.6 ? C8 LPA 401 A 1 
HETATM 12 S S8 LPA . . . B 2 63.801 74.783 132.148 1 41.17 ? S8 LPA 401 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           12 
#