data_5IJP # _model_server_result.job_id IvWm1lWPKy3P44fovCPhOg _model_server_result.datetime_utc '2024-11-17 04:27:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ijp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5IJP # _exptl.entry_id 5IJP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 660.035 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSITOL HEXAKISPHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5IJP _cell.length_a 74.2 _cell.length_b 74.2 _cell.length_c 74.42 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IJP _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H18 O24 P6' _chem_comp.formula_weight 660.035 _chem_comp.id IHP _chem_comp.mon_nstd_flag . _chem_comp.name 'INOSITOL HEXAKISPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IHP sing 145 n n C1 C6 IHP sing 146 n n C1 O11 IHP sing 147 n n C1 H1 IHP sing 148 n n C2 C3 IHP sing 149 n n C2 O12 IHP sing 150 n n C2 H2 IHP sing 151 n n C3 C4 IHP sing 152 n n C3 O13 IHP sing 153 n n C3 H3 IHP sing 154 n n C4 C5 IHP sing 155 n n C4 O14 IHP sing 156 n n C4 H4 IHP sing 157 n n C5 C6 IHP sing 158 n n C5 O15 IHP sing 159 n n C5 H5 IHP sing 160 n n C6 O16 IHP sing 161 n n C6 H6 IHP sing 162 n n O11 P1 IHP sing 163 n n P1 O21 IHP doub 164 n n P1 O31 IHP sing 165 n n P1 O41 IHP sing 166 n n O31 H31 IHP sing 167 n n O41 H41 IHP sing 168 n n O12 P2 IHP sing 169 n n P2 O22 IHP doub 170 n n P2 O32 IHP sing 171 n n P2 O42 IHP sing 172 n n O32 H32 IHP sing 173 n n O42 H42 IHP sing 174 n n O13 P3 IHP sing 175 n n P3 O23 IHP doub 176 n n P3 O33 IHP sing 177 n n P3 O43 IHP sing 178 n n O33 H33 IHP sing 179 n n O43 H43 IHP sing 180 n n O14 P4 IHP sing 181 n n P4 O24 IHP doub 182 n n P4 O34 IHP sing 183 n n P4 O44 IHP sing 184 n n O34 H34 IHP sing 185 n n O44 H44 IHP sing 186 n n O15 P5 IHP sing 187 n n P5 O25 IHP doub 188 n n P5 O35 IHP sing 189 n n P5 O45 IHP sing 190 n n O35 H35 IHP sing 191 n n O45 H45 IHP sing 192 n n O16 P6 IHP sing 193 n n P6 O26 IHP doub 194 n n P6 O36 IHP sing 195 n n P6 O46 IHP sing 196 n n O36 H36 IHP sing 197 n n O46 H46 IHP sing 198 n n # _atom_sites.entry_id 5IJP _atom_sites.fract_transf_matrix[1][1] 0.013477 _atom_sites.fract_transf_matrix[1][2] 0.007781 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015562 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013437 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 301 1000 ACT ACT . C 3 IHP A 1 302 500 IHP I6P . D 4 HOH A 1 401 4 HOH HOH . D 4 HOH A 2 402 3 HOH HOH . D 4 HOH A 3 403 2 HOH HOH . D 4 HOH A 4 404 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHP . . . C 3 -17.925 -7.825 12.307 1 210.25 ? C1 IHP 302 A 1 HETATM 2 C C2 IHP . . . C 3 -16.863 -7.466 11.277 1 210.68 ? C2 IHP 302 A 1 HETATM 3 C C3 IHP . . . C 3 -17.341 -6.383 10.319 1 210.14 ? C3 IHP 302 A 1 HETATM 4 C C4 IHP . . . C 3 -17.857 -5.161 11.068 1 211.99 ? C4 IHP 302 A 1 HETATM 5 C C5 IHP . . . C 3 -18.922 -5.526 12.093 1 211.68 ? C5 IHP 302 A 1 HETATM 6 C C6 IHP . . . C 3 -18.419 -6.594 13.054 1 212.08 ? C6 IHP 302 A 1 HETATM 7 O O11 IHP . . . C 3 -17.329 -8.725 13.265 1 211.18 ? O11 IHP 302 A 1 HETATM 8 P P1 IHP . . . C 3 -17.913 -10.087 13.934 1 209.93 ? P1 IHP 302 A 1 HETATM 9 O O21 IHP . . . C 3 -16.811 -10.851 14.591 1 211.58 ? O21 IHP 302 A 1 HETATM 10 O O31 IHP . . . C 3 -18.993 -9.638 14.921 1 209.9 ? O31 IHP 302 A 1 HETATM 11 O O41 IHP . . . C 3 -18.587 -10.872 12.804 1 207.42 ? O41 IHP 302 A 1 HETATM 12 O O12 IHP . . . C 3 -16.559 -8.65 10.509 1 209.05 ? O12 IHP 302 A 1 HETATM 13 P P2 IHP . . . C 3 -15.1 -9.376 10.37 1 210.43 ? P2 IHP 302 A 1 HETATM 14 O O22 IHP . . . C 3 -15.057 -10.44 11.469 1 210.62 ? O22 IHP 302 A 1 HETATM 15 O O32 IHP . . . C 3 -13.983 -8.386 10.48 1 213.25 ? O32 IHP 302 A 1 HETATM 16 O O42 IHP . . . C 3 -15.119 -10.095 9.018 1 208.75 ? O42 IHP 302 A 1 HETATM 17 O O13 IHP . . . C 3 -18.399 -6.916 9.493 1 206.97 ? O13 IHP 302 A 1 HETATM 18 P P3 IHP . . . C 3 -18.42 -7.257 7.917 1 204.9 ? P3 IHP 302 A 1 HETATM 19 O O23 IHP . . . C 3 -19.248 -6.253 7.197 1 204.2 ? O23 IHP 302 A 1 HETATM 20 O O33 IHP . . . C 3 -16.968 -7.289 7.428 1 206.33 ? O33 IHP 302 A 1 HETATM 21 O O43 IHP . . . C 3 -18.979 -8.673 7.811 1 202.98 ? O43 IHP 302 A 1 HETATM 22 O O14 IHP . . . C 3 -18.438 -4.251 10.11 1 211.38 ? O14 IHP 302 A 1 HETATM 23 P P4 IHP . . . C 3 -17.689 -2.944 9.426 1 213.25 ? P4 IHP 302 A 1 HETATM 24 O O24 IHP . . . C 3 -18.184 -2.892 7.978 1 211.18 ? O24 IHP 302 A 1 HETATM 25 O O34 IHP . . . C 3 -18.016 -1.705 10.191 1 215.47 ? O34 IHP 302 A 1 HETATM 26 O O44 IHP . . . C 3 -16.183 -3.24 9.396 1 214.93 ? O44 IHP 302 A 1 HETATM 27 O O15 IHP . . . C 3 -19.231 -4.342 12.858 1 213.98 ? O15 IHP 302 A 1 HETATM 28 P P5 IHP . . . C 3 -20.55 -3.443 12.961 1 214.23 ? P5 IHP 302 A 1 HETATM 29 O O25 IHP . . . C 3 -21.743 -4.349 12.627 1 211.53 ? O25 IHP 302 A 1 HETATM 30 O O35 IHP . . . C 3 -20.431 -2.387 11.858 1 214.85 ? O35 IHP 302 A 1 HETATM 31 O O45 IHP . . . C 3 -20.651 -2.841 14.324 1 216.64 ? O45 IHP 302 A 1 HETATM 32 O O16 IHP . . . C 3 -19.522 -6.997 13.894 1 211.67 ? O16 IHP 302 A 1 HETATM 33 P P6 IHP . . . C 3 -20.125 -6.458 15.274 1 213.59 ? P6 IHP 302 A 1 HETATM 34 O O26 IHP . . . C 3 -19.322 -5.208 15.664 1 216.58 ? O26 IHP 302 A 1 HETATM 35 O O36 IHP . . . C 3 -20.067 -7.529 16.313 1 213.68 ? O36 IHP 302 A 1 HETATM 36 O O46 IHP . . . C 3 -21.558 -6.02 14.96 1 212.57 ? O46 IHP 302 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #