data_5IK6 # _model_server_result.job_id oVGBtz2DxTGsLQbBODD3ug _model_server_result.datetime_utc '2024-11-02 21:40:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ik6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 5IK6 # _exptl.entry_id 5IK6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5IK6 _cell.length_a 126.51 _cell.length_b 126.51 _cell.length_c 123.21 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IK6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 303 A ASP 301 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc2 A OD2 ASP 303 A ASP 301 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc3 A OD2 ASP 307 A ASP 305 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.862 ? metalc ? metalc4 A OD1 ASP 446 A ASP 444 1_555 B MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc5 A OG1 THR 450 A THR 448 1_555 B MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.95 ? metalc ? metalc6 A OE1 GLU 454 A GLU 452 1_555 B MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc7 B MG MG . A MG 601 1_555 F O5 DPO . A DPO 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc8 B MG MG . A MG 601 1_555 G O HOH . A HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc9 B MG MG . A MG 601 1_555 G O HOH . A HOH 732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc10 C MG MG . A MG 602 1_555 F O2 DPO . A DPO 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc11 C MG MG . A MG 602 1_555 F O6 DPO . A DPO 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc12 C MG MG . A MG 602 1_555 G O HOH . A HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc13 C MG MG . A MG 602 1_555 G O HOH . A HOH 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc14 C MG MG . A MG 602 1_555 G O HOH . A HOH 723 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc15 D MG MG . A MG 603 1_555 F O2 DPO . A DPO 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc16 D MG MG . A MG 603 1_555 G O HOH . A HOH 789 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5IK6 _atom_sites.fract_transf_matrix[1][1] 0.007905 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007905 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008116 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 601 1 MG MG . C 2 MG A 1 602 3 MG MG . D 2 MG A 1 603 4 MG MG . E 3 CRE A 1 604 599 CRE GEA . F 4 DPO A 1 605 600 DPO DPO . G 5 HOH A 1 701 200 HOH HOH . G 5 HOH A 2 702 233 HOH HOH . G 5 HOH A 3 703 146 HOH HOH . G 5 HOH A 4 704 183 HOH HOH . G 5 HOH A 5 705 102 HOH HOH . G 5 HOH A 6 706 163 HOH HOH . G 5 HOH A 7 707 217 HOH HOH . G 5 HOH A 8 708 112 HOH HOH . G 5 HOH A 9 709 139 HOH HOH . G 5 HOH A 10 710 103 HOH HOH . G 5 HOH A 11 711 36 HOH HOH . G 5 HOH A 12 712 176 HOH HOH . G 5 HOH A 13 713 62 HOH HOH . G 5 HOH A 14 714 208 HOH HOH . G 5 HOH A 15 715 184 HOH HOH . G 5 HOH A 16 716 7 HOH HOH . G 5 HOH A 17 717 52 HOH HOH . G 5 HOH A 18 718 16 HOH HOH . G 5 HOH A 19 719 132 HOH HOH . G 5 HOH A 20 720 91 HOH HOH . G 5 HOH A 21 721 76 HOH HOH . G 5 HOH A 22 722 164 HOH HOH . G 5 HOH A 23 723 234 HOH HOH . G 5 HOH A 24 724 61 HOH HOH . G 5 HOH A 25 725 47 HOH HOH . G 5 HOH A 26 726 77 HOH HOH . G 5 HOH A 27 727 65 HOH HOH . G 5 HOH A 28 728 179 HOH HOH . G 5 HOH A 29 729 106 HOH HOH . G 5 HOH A 30 730 145 HOH HOH . G 5 HOH A 31 731 115 HOH HOH . G 5 HOH A 32 732 171 HOH HOH . G 5 HOH A 33 733 110 HOH HOH . G 5 HOH A 34 734 140 HOH HOH . G 5 HOH A 35 735 90 HOH HOH . G 5 HOH A 36 736 5 HOH HOH . G 5 HOH A 37 737 214 HOH HOH . G 5 HOH A 38 738 44 HOH HOH . G 5 HOH A 39 739 101 HOH HOH . G 5 HOH A 40 740 18 HOH HOH . G 5 HOH A 41 741 86 HOH HOH . G 5 HOH A 42 742 186 HOH HOH . G 5 HOH A 43 743 27 HOH HOH . G 5 HOH A 44 744 40 HOH HOH . G 5 HOH A 45 745 33 HOH HOH . G 5 HOH A 46 746 82 HOH HOH . G 5 HOH A 47 747 15 HOH HOH . G 5 HOH A 48 748 107 HOH HOH . G 5 HOH A 49 749 6 HOH HOH . G 5 HOH A 50 750 187 HOH HOH . G 5 HOH A 51 751 59 HOH HOH . G 5 HOH A 52 752 105 HOH HOH . G 5 HOH A 53 753 25 HOH HOH . G 5 HOH A 54 754 71 HOH HOH . G 5 HOH A 55 755 8 HOH HOH . G 5 HOH A 56 756 14 HOH HOH . G 5 HOH A 57 757 41 HOH HOH . G 5 HOH A 58 758 28 HOH HOH . G 5 HOH A 59 759 125 HOH HOH . G 5 HOH A 60 760 209 HOH HOH . G 5 HOH A 61 761 23 HOH HOH . G 5 HOH A 62 762 57 HOH HOH . G 5 HOH A 63 763 37 HOH HOH . G 5 HOH A 64 764 96 HOH HOH . G 5 HOH A 65 765 29 HOH HOH . G 5 HOH A 66 766 130 HOH HOH . G 5 HOH A 67 767 56 HOH HOH . G 5 HOH A 68 768 149 HOH HOH . G 5 HOH A 69 769 127 HOH HOH . G 5 HOH A 70 770 63 HOH HOH . G 5 HOH A 71 771 46 HOH HOH . G 5 HOH A 72 772 165 HOH HOH . G 5 HOH A 73 773 54 HOH HOH . G 5 HOH A 74 774 114 HOH HOH . G 5 HOH A 75 775 94 HOH HOH . G 5 HOH A 76 776 22 HOH HOH . G 5 HOH A 77 777 84 HOH HOH . G 5 HOH A 78 778 1 HOH HOH . G 5 HOH A 79 779 64 HOH HOH . G 5 HOH A 80 780 99 HOH HOH . G 5 HOH A 81 781 78 HOH HOH . G 5 HOH A 82 782 169 HOH HOH . G 5 HOH A 83 783 80 HOH HOH . G 5 HOH A 84 784 31 HOH HOH . G 5 HOH A 85 785 48 HOH HOH . G 5 HOH A 86 786 151 HOH HOH . G 5 HOH A 87 787 10 HOH HOH . G 5 HOH A 88 788 206 HOH HOH . G 5 HOH A 89 789 235 HOH HOH . G 5 HOH A 90 790 9 HOH HOH . G 5 HOH A 91 791 216 HOH HOH . G 5 HOH A 92 792 122 HOH HOH . G 5 HOH A 93 793 66 HOH HOH . G 5 HOH A 94 794 153 HOH HOH . G 5 HOH A 95 795 4 HOH HOH . G 5 HOH A 96 796 180 HOH HOH . G 5 HOH A 97 797 113 HOH HOH . G 5 HOH A 98 798 12 HOH HOH . G 5 HOH A 99 799 93 HOH HOH . G 5 HOH A 100 800 222 HOH HOH . G 5 HOH A 101 801 49 HOH HOH . G 5 HOH A 102 802 35 HOH HOH . G 5 HOH A 103 803 3 HOH HOH . G 5 HOH A 104 804 98 HOH HOH . G 5 HOH A 105 805 58 HOH HOH . G 5 HOH A 106 806 126 HOH HOH . G 5 HOH A 107 807 121 HOH HOH . G 5 HOH A 108 808 43 HOH HOH . G 5 HOH A 109 809 128 HOH HOH . G 5 HOH A 110 810 117 HOH HOH . G 5 HOH A 111 811 50 HOH HOH . G 5 HOH A 112 812 100 HOH HOH . G 5 HOH A 113 813 142 HOH HOH . G 5 HOH A 114 814 87 HOH HOH . G 5 HOH A 115 815 26 HOH HOH . G 5 HOH A 116 816 120 HOH HOH . G 5 HOH A 117 817 11 HOH HOH . G 5 HOH A 118 818 135 HOH HOH . G 5 HOH A 119 819 156 HOH HOH . G 5 HOH A 120 820 154 HOH HOH . G 5 HOH A 121 821 220 HOH HOH . G 5 HOH A 122 822 74 HOH HOH . G 5 HOH A 123 823 116 HOH HOH . G 5 HOH A 124 824 175 HOH HOH . G 5 HOH A 125 825 20 HOH HOH . G 5 HOH A 126 826 97 HOH HOH . G 5 HOH A 127 827 229 HOH HOH . G 5 HOH A 128 828 207 HOH HOH . G 5 HOH A 129 829 159 HOH HOH . G 5 HOH A 130 830 199 HOH HOH . G 5 HOH A 131 831 211 HOH HOH . G 5 HOH A 132 832 38 HOH HOH . G 5 HOH A 133 833 81 HOH HOH . G 5 HOH A 134 834 223 HOH HOH . G 5 HOH A 135 835 88 HOH HOH . G 5 HOH A 136 836 79 HOH HOH . G 5 HOH A 137 837 131 HOH HOH . G 5 HOH A 138 838 60 HOH HOH . G 5 HOH A 139 839 109 HOH HOH . G 5 HOH A 140 840 45 HOH HOH . G 5 HOH A 141 841 123 HOH HOH . G 5 HOH A 142 842 202 HOH HOH . G 5 HOH A 143 843 161 HOH HOH . G 5 HOH A 144 844 136 HOH HOH . G 5 HOH A 145 845 19 HOH HOH . G 5 HOH A 146 846 85 HOH HOH . G 5 HOH A 147 847 190 HOH HOH . G 5 HOH A 148 848 226 HOH HOH . G 5 HOH A 149 849 55 HOH HOH . G 5 HOH A 150 850 95 HOH HOH . G 5 HOH A 151 851 68 HOH HOH . G 5 HOH A 152 852 178 HOH HOH . G 5 HOH A 153 853 69 HOH HOH . G 5 HOH A 154 854 170 HOH HOH . G 5 HOH A 155 855 152 HOH HOH . G 5 HOH A 156 856 83 HOH HOH . G 5 HOH A 157 857 195 HOH HOH . G 5 HOH A 158 858 148 HOH HOH . G 5 HOH A 159 859 191 HOH HOH . G 5 HOH A 160 860 73 HOH HOH . G 5 HOH A 161 861 144 HOH HOH . G 5 HOH A 162 862 174 HOH HOH . G 5 HOH A 163 863 119 HOH HOH . G 5 HOH A 164 864 70 HOH HOH . G 5 HOH A 165 865 72 HOH HOH . G 5 HOH A 166 866 173 HOH HOH . G 5 HOH A 167 867 17 HOH HOH . G 5 HOH A 168 868 218 HOH HOH . G 5 HOH A 169 869 172 HOH HOH . G 5 HOH A 170 870 150 HOH HOH . G 5 HOH A 171 871 201 HOH HOH . G 5 HOH A 172 872 92 HOH HOH . G 5 HOH A 173 873 32 HOH HOH . G 5 HOH A 174 874 147 HOH HOH . G 5 HOH A 175 875 166 HOH HOH . G 5 HOH A 176 876 210 HOH HOH . G 5 HOH A 177 877 13 HOH HOH . G 5 HOH A 178 878 30 HOH HOH . G 5 HOH A 179 879 155 HOH HOH . G 5 HOH A 180 880 181 HOH HOH . G 5 HOH A 181 881 53 HOH HOH . G 5 HOH A 182 882 133 HOH HOH . G 5 HOH A 183 883 137 HOH HOH . G 5 HOH A 184 884 188 HOH HOH . G 5 HOH A 185 885 212 HOH HOH . G 5 HOH A 186 886 167 HOH HOH . G 5 HOH A 187 887 141 HOH HOH . G 5 HOH A 188 888 75 HOH HOH . G 5 HOH A 189 889 67 HOH HOH . G 5 HOH A 190 890 224 HOH HOH . G 5 HOH A 191 891 134 HOH HOH . G 5 HOH A 192 892 118 HOH HOH . G 5 HOH A 193 893 157 HOH HOH . G 5 HOH A 194 894 160 HOH HOH . G 5 HOH A 195 895 231 HOH HOH . G 5 HOH A 196 896 162 HOH HOH . G 5 HOH A 197 897 215 HOH HOH . G 5 HOH A 198 898 205 HOH HOH . G 5 HOH A 199 899 196 HOH HOH . G 5 HOH A 200 900 39 HOH HOH . G 5 HOH A 201 901 221 HOH HOH . G 5 HOH A 202 902 197 HOH HOH . G 5 HOH A 203 903 2 HOH HOH . G 5 HOH A 204 904 89 HOH HOH . G 5 HOH A 205 905 185 HOH HOH . G 5 HOH A 206 906 168 HOH HOH . G 5 HOH A 207 907 124 HOH HOH . G 5 HOH A 208 908 158 HOH HOH . G 5 HOH A 209 909 177 HOH HOH . G 5 HOH A 210 910 227 HOH HOH . G 5 HOH A 211 911 42 HOH HOH . G 5 HOH A 212 912 219 HOH HOH . G 5 HOH A 213 913 203 HOH HOH . G 5 HOH A 214 914 192 HOH HOH . G 5 HOH A 215 915 228 HOH HOH . G 5 HOH A 216 916 194 HOH HOH . G 5 HOH A 217 917 232 HOH HOH . G 5 HOH A 218 918 230 HOH HOH . G 5 HOH A 219 919 51 HOH HOH . G 5 HOH A 220 920 111 HOH HOH . G 5 HOH A 221 921 143 HOH HOH . G 5 HOH A 222 922 204 HOH HOH . G 5 HOH A 223 923 225 HOH HOH . G 5 HOH A 224 924 24 HOH HOH . G 5 HOH A 225 925 129 HOH HOH . G 5 HOH A 226 926 108 HOH HOH . G 5 HOH A 227 927 21 HOH HOH . G 5 HOH A 228 928 138 HOH HOH . G 5 HOH A 229 929 198 HOH HOH . G 5 HOH A 230 930 104 HOH HOH . G 5 HOH A 231 931 34 HOH HOH . G 5 HOH A 232 932 193 HOH HOH . G 5 HOH A 233 933 213 HOH HOH . G 5 HOH A 234 934 189 HOH HOH . G 5 HOH A 235 935 182 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 20.352 _atom_site.Cartn_y 85.137 _atom_site.Cartn_z 11.202 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 131.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 602 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #