data_5IN9 # _model_server_result.job_id eAAuV7zFn2Ngo2xZFywHPQ _model_server_result.datetime_utc '2025-01-10 19:58:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5in9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5IN9 # _exptl.entry_id 5IN9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.91 _cell.angle_gamma 90 _cell.entry_id 5IN9 _cell.length_a 43.02 _cell.length_b 65.65 _cell.length_c 95.86 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IN9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,S 1 1 B,M,N,O,P,Q,R,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 295 n n C1 C2 PGE sing 296 n n C1 H1 PGE sing 297 n n C1 H12 PGE sing 298 n n O1 HO1 PGE sing 299 n n C2 O2 PGE sing 300 n n C2 H2 PGE sing 301 n n C2 H22 PGE sing 302 n n O2 C3 PGE sing 303 n n C3 C4 PGE sing 304 n n C3 H3 PGE sing 305 n n C3 H32 PGE sing 306 n n C4 O3 PGE sing 307 n n C4 H4 PGE sing 308 n n C4 H42 PGE sing 309 n n O4 C6 PGE sing 310 n n O4 HO4 PGE sing 311 n n C6 C5 PGE sing 312 n n C6 H6 PGE sing 313 n n C6 H62 PGE sing 314 n n C5 O3 PGE sing 315 n n C5 H5 PGE sing 316 n n C5 H52 PGE sing 317 n n # _atom_sites.entry_id 5IN9 _atom_sites.fract_transf_matrix[1][1] 0.023245 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001181 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015232 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010445 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE A 1 401 1 PGE PEG . D 3 GOL A 1 402 2 GOL GOL . E 3 GOL A 1 403 3 GOL GOL . F 3 GOL A 1 404 4 GOL GOL . G 3 GOL A 1 405 5 GOL GOL . H 3 GOL A 1 406 6 GOL GOL . I 3 GOL A 1 407 12 GOL GOL . J 3 GOL A 1 408 13 GOL GOL . K 3 GOL A 1 409 14 GOL GOL . L 4 6C0 A 1 410 1 6C0 VC3 . M 3 GOL B 1 401 7 GOL GOL . N 3 GOL B 1 402 8 GOL GOL . O 3 GOL B 1 403 9 GOL GOL . P 3 GOL B 1 404 10 GOL GOL . Q 3 GOL B 1 405 11 GOL GOL . R 4 6C0 B 1 406 2 6C0 VC3 . S 5 HOH A 1 501 62 HOH HOH . S 5 HOH A 2 502 26 HOH HOH . S 5 HOH A 3 503 11 HOH HOH . S 5 HOH A 4 504 20 HOH HOH . S 5 HOH A 5 505 15 HOH HOH . S 5 HOH A 6 506 35 HOH HOH . S 5 HOH A 7 507 21 HOH HOH . S 5 HOH A 8 508 19 HOH HOH . S 5 HOH A 9 509 57 HOH HOH . S 5 HOH A 10 510 18 HOH HOH . S 5 HOH A 11 511 51 HOH HOH . S 5 HOH A 12 512 3 HOH HOH . S 5 HOH A 13 513 28 HOH HOH . S 5 HOH A 14 514 2 HOH HOH . S 5 HOH A 15 515 39 HOH HOH . S 5 HOH A 16 516 42 HOH HOH . S 5 HOH A 17 517 10 HOH HOH . S 5 HOH A 18 518 22 HOH HOH . S 5 HOH A 19 519 7 HOH HOH . S 5 HOH A 20 520 46 HOH HOH . S 5 HOH A 21 521 1 HOH HOH . S 5 HOH A 22 522 30 HOH HOH . S 5 HOH A 23 523 63 HOH HOH . S 5 HOH A 24 524 33 HOH HOH . S 5 HOH A 25 525 60 HOH HOH . S 5 HOH A 26 526 58 HOH HOH . S 5 HOH A 27 527 8 HOH HOH . S 5 HOH A 28 528 29 HOH HOH . S 5 HOH A 29 529 50 HOH HOH . S 5 HOH A 30 530 59 HOH HOH . S 5 HOH A 31 531 44 HOH HOH . S 5 HOH A 32 532 49 HOH HOH . S 5 HOH A 33 533 41 HOH HOH . S 5 HOH A 34 534 56 HOH HOH . S 5 HOH A 35 535 48 HOH HOH . S 5 HOH A 36 536 47 HOH HOH . T 5 HOH B 1 501 12 HOH HOH . T 5 HOH B 2 502 27 HOH HOH . T 5 HOH B 3 503 25 HOH HOH . T 5 HOH B 4 504 6 HOH HOH . T 5 HOH B 5 505 36 HOH HOH . T 5 HOH B 6 506 5 HOH HOH . T 5 HOH B 7 507 4 HOH HOH . T 5 HOH B 8 508 17 HOH HOH . T 5 HOH B 9 509 14 HOH HOH . T 5 HOH B 10 510 24 HOH HOH . T 5 HOH B 11 511 9 HOH HOH . T 5 HOH B 12 512 16 HOH HOH . T 5 HOH B 13 513 13 HOH HOH . T 5 HOH B 14 514 45 HOH HOH . T 5 HOH B 15 515 43 HOH HOH . T 5 HOH B 16 516 54 HOH HOH . T 5 HOH B 17 517 23 HOH HOH . T 5 HOH B 18 518 38 HOH HOH . T 5 HOH B 19 519 40 HOH HOH . T 5 HOH B 20 520 52 HOH HOH . T 5 HOH B 21 521 34 HOH HOH . T 5 HOH B 22 522 37 HOH HOH . T 5 HOH B 23 523 31 HOH HOH . T 5 HOH B 24 524 53 HOH HOH . T 5 HOH B 25 525 61 HOH HOH . T 5 HOH B 26 526 32 HOH HOH . T 5 HOH B 27 527 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . C 2 48.518 -130.51 122.254 1 24.14 ? C1 PGE 401 A 1 HETATM 2 O O1 PGE . . . C 2 47.157 -130.719 121.906 1 35.49 ? O1 PGE 401 A 1 HETATM 3 C C2 PGE . . . C 2 49.434 -130.843 121.079 1 23.87 ? C2 PGE 401 A 1 HETATM 4 O O2 PGE . . . C 2 50.18 -129.654 120.76 1 37.97 ? O2 PGE 401 A 1 HETATM 5 C C3 PGE . . . C 2 50.762 -129.667 119.454 1 37.52 ? C3 PGE 401 A 1 HETATM 6 C C4 PGE . . . C 2 50.561 -128.313 118.743 1 34.58 ? C4 PGE 401 A 1 HETATM 7 O O4 PGE . . . C 2 47.044 -127.578 116.754 1 32.3 ? O4 PGE 401 A 1 HETATM 8 C C6 PGE . . . C 2 48.237 -127.548 116.014 1 27.48 ? C6 PGE 401 A 1 HETATM 9 C C5 PGE . . . C 2 49.373 -127.298 116.94 1 27.62 ? C5 PGE 401 A 1 HETATM 10 O O3 PGE . . . C 2 49.539 -128.467 117.737 1 31.79 ? O3 PGE 401 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #