data_5IOK
#
_model_server_result.job_id            uHcb4v0jgcN_bK-60XoUqA 
_model_server_result.datetime_utc      '2024-11-22 04:18:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5iok 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    5IOK 
#
_exptl.entry_id    5IOK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5IOK 
_cell.length_a            113.095 
_cell.length_b            113.095 
_cell.length_c            26.176 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5IOK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C ACE 1 C ACE 3 1_555 B N GLN 2 C GLN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 B C ARG 5 C ARG 7 1_555 B N KCR 6 C KCR 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 B C KCR 6 C KCR 8 1_555 B N SER 7 C SER 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 262 n n 
C1 C2 PEG sing 263 n n 
C1 H11 PEG sing 264 n n 
C1 H12 PEG sing 265 n n 
O1 HO1 PEG sing 266 n n 
C2 O2 PEG sing 267 n n 
C2 H21 PEG sing 268 n n 
C2 H22 PEG sing 269 n n 
O2 C3 PEG sing 270 n n 
C3 C4 PEG sing 271 n n 
C3 H31 PEG sing 272 n n 
C3 H32 PEG sing 273 n n 
C4 O4 PEG sing 274 n n 
C4 H41 PEG sing 275 n n 
C4 H42 PEG sing 276 n n 
O4 HO4 PEG sing 277 n n 
#
_atom_sites.entry_id                     5IOK 
_atom_sites.fract_transf_matrix[1][1]    0.008842 
_atom_sites.fract_transf_matrix[1][2]    0.005105 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01021 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.038203 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 PEG A 1 201 1 PEG PEG . 
D 3 PEG A 1 202 2 PEG PEG . 
E 4 HOH A 1 301 45 HOH HOH . 
E 4 HOH A 2 302 75 HOH HOH . 
E 4 HOH A 3 303 81 HOH HOH . 
E 4 HOH A 4 304 47 HOH HOH . 
E 4 HOH A 5 305 59 HOH HOH . 
E 4 HOH A 6 306 52 HOH HOH . 
E 4 HOH A 7 307 35 HOH HOH . 
E 4 HOH A 8 308 61 HOH HOH . 
E 4 HOH A 9 309 87 HOH HOH . 
E 4 HOH A 10 310 22 HOH HOH . 
E 4 HOH A 11 311 7 HOH HOH . 
E 4 HOH A 12 312 26 HOH HOH . 
E 4 HOH A 13 313 37 HOH HOH . 
E 4 HOH A 14 314 28 HOH HOH . 
E 4 HOH A 15 315 39 HOH HOH . 
E 4 HOH A 16 316 46 HOH HOH . 
E 4 HOH A 17 317 72 HOH HOH . 
E 4 HOH A 18 318 54 HOH HOH . 
E 4 HOH A 19 319 112 HOH HOH . 
E 4 HOH A 20 320 11 HOH HOH . 
E 4 HOH A 21 321 2 HOH HOH . 
E 4 HOH A 22 322 103 HOH HOH . 
E 4 HOH A 23 323 15 HOH HOH . 
E 4 HOH A 24 324 40 HOH HOH . 
E 4 HOH A 25 325 58 HOH HOH . 
E 4 HOH A 26 326 1 HOH HOH . 
E 4 HOH A 27 327 73 HOH HOH . 
E 4 HOH A 28 328 41 HOH HOH . 
E 4 HOH A 29 329 62 HOH HOH . 
E 4 HOH A 30 330 4 HOH HOH . 
E 4 HOH A 31 331 32 HOH HOH . 
E 4 HOH A 32 332 111 HOH HOH . 
E 4 HOH A 33 333 64 HOH HOH . 
E 4 HOH A 34 334 80 HOH HOH . 
E 4 HOH A 35 335 70 HOH HOH . 
E 4 HOH A 36 336 19 HOH HOH . 
E 4 HOH A 37 337 44 HOH HOH . 
E 4 HOH A 38 338 60 HOH HOH . 
E 4 HOH A 39 339 3 HOH HOH . 
E 4 HOH A 40 340 51 HOH HOH . 
E 4 HOH A 41 341 12 HOH HOH . 
E 4 HOH A 42 342 23 HOH HOH . 
E 4 HOH A 43 343 5 HOH HOH . 
E 4 HOH A 44 344 14 HOH HOH . 
E 4 HOH A 45 345 9 HOH HOH . 
E 4 HOH A 46 346 56 HOH HOH . 
E 4 HOH A 47 347 8 HOH HOH . 
E 4 HOH A 48 348 33 HOH HOH . 
E 4 HOH A 49 349 53 HOH HOH . 
E 4 HOH A 50 350 10 HOH HOH . 
E 4 HOH A 51 351 29 HOH HOH . 
E 4 HOH A 52 352 6 HOH HOH . 
E 4 HOH A 53 353 42 HOH HOH . 
E 4 HOH A 54 354 102 HOH HOH . 
E 4 HOH A 55 355 27 HOH HOH . 
E 4 HOH A 56 356 82 HOH HOH . 
E 4 HOH A 57 357 86 HOH HOH . 
E 4 HOH A 58 358 88 HOH HOH . 
E 4 HOH A 59 359 18 HOH HOH . 
E 4 HOH A 60 360 21 HOH HOH . 
E 4 HOH A 61 361 63 HOH HOH . 
E 4 HOH A 62 362 20 HOH HOH . 
E 4 HOH A 63 363 17 HOH HOH . 
E 4 HOH A 64 364 43 HOH HOH . 
E 4 HOH A 65 365 25 HOH HOH . 
E 4 HOH A 66 366 36 HOH HOH . 
E 4 HOH A 67 367 13 HOH HOH . 
E 4 HOH A 68 368 110 HOH HOH . 
E 4 HOH A 69 369 109 HOH HOH . 
E 4 HOH A 70 370 94 HOH HOH . 
E 4 HOH A 71 371 69 HOH HOH . 
E 4 HOH A 72 372 50 HOH HOH . 
E 4 HOH A 73 373 38 HOH HOH . 
E 4 HOH A 74 374 76 HOH HOH . 
E 4 HOH A 75 375 24 HOH HOH . 
E 4 HOH A 76 376 71 HOH HOH . 
E 4 HOH A 77 377 100 HOH HOH . 
E 4 HOH A 78 378 48 HOH HOH . 
E 4 HOH A 79 379 67 HOH HOH . 
E 4 HOH A 80 380 93 HOH HOH . 
E 4 HOH A 81 381 84 HOH HOH . 
E 4 HOH A 82 382 96 HOH HOH . 
E 4 HOH A 83 383 95 HOH HOH . 
E 4 HOH A 84 384 83 HOH HOH . 
E 4 HOH A 85 385 91 HOH HOH . 
E 4 HOH A 86 386 89 HOH HOH . 
E 4 HOH A 87 387 104 HOH HOH . 
E 4 HOH A 88 388 66 HOH HOH . 
E 4 HOH A 89 389 90 HOH HOH . 
E 4 HOH A 90 390 79 HOH HOH . 
E 4 HOH A 91 391 99 HOH HOH . 
E 4 HOH A 92 392 74 HOH HOH . 
E 4 HOH A 93 393 92 HOH HOH . 
E 4 HOH A 94 394 31 HOH HOH . 
E 4 HOH A 95 395 106 HOH HOH . 
E 4 HOH A 96 396 68 HOH HOH . 
E 4 HOH A 97 397 97 HOH HOH . 
E 4 HOH A 98 398 57 HOH HOH . 
E 4 HOH A 99 399 55 HOH HOH . 
E 4 HOH A 100 400 30 HOH HOH . 
E 4 HOH A 101 401 78 HOH HOH . 
E 4 HOH A 102 402 107 HOH HOH . 
E 4 HOH A 103 403 101 HOH HOH . 
E 4 HOH A 104 404 49 HOH HOH . 
E 4 HOH A 105 405 105 HOH HOH . 
E 4 HOH A 106 406 77 HOH HOH . 
E 4 HOH A 107 407 113 HOH HOH . 
F 4 HOH C 1 101 16 HOH HOH . 
F 4 HOH C 2 102 108 HOH HOH . 
F 4 HOH C 3 103 65 HOH HOH . 
F 4 HOH C 4 104 85 HOH HOH . 
F 4 HOH C 5 105 34 HOH HOH . 
F 4 HOH C 6 106 98 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . C 3 52.953 -13.907 17.07 1 50.7 ? C1 PEG 201 A 1 
HETATM 2 O O1 PEG . . . C 3 54.372 -14.027 17.176 1 50.13 ? O1 PEG 201 A 1 
HETATM 3 C C2 PEG . . . C 3 52.604 -12.983 15.873 1 49.27 ? C2 PEG 201 A 1 
HETATM 4 O O2 PEG . . . C 3 53.755 -12.195 15.501 1 47.89 ? O2 PEG 201 A 1 
HETATM 5 C C3 PEG . . . C 3 53.49 -11.28 14.405 1 46.57 ? C3 PEG 201 A 1 
HETATM 6 C C4 PEG . . . C 3 54.554 -10.196 14.296 1 45.38 ? C4 PEG 201 A 1 
HETATM 7 O O4 PEG . . . C 3 54.398 -9.224 15.321 1 46.1 ? O4 PEG 201 A 1 
#
_model_server_stats.io_time_ms              75 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           7 
#