data_5IOQ # _model_server_result.job_id 0HijxLXkvgyK_fp_KYxzJQ _model_server_result.datetime_utc '2024-11-24 19:45:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ioq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":303}' # _entry.id 5IOQ # _exptl.entry_id 5IOQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5IOQ _cell.length_a 54.19 _cell.length_b 116.113 _cell.length_c 141.891 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IOQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 N N N ? 3 O N N ? 3 R N N ? 3 S N N ? 3 T N N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 357 n n C1 C2 PGE sing 358 n n C1 H1 PGE sing 359 n n C1 H12 PGE sing 360 n n O1 HO1 PGE sing 361 n n C2 O2 PGE sing 362 n n C2 H2 PGE sing 363 n n C2 H22 PGE sing 364 n n O2 C3 PGE sing 365 n n C3 C4 PGE sing 366 n n C3 H3 PGE sing 367 n n C3 H32 PGE sing 368 n n C4 O3 PGE sing 369 n n C4 H4 PGE sing 370 n n C4 H42 PGE sing 371 n n O4 C6 PGE sing 372 n n O4 HO4 PGE sing 373 n n C6 C5 PGE sing 374 n n C6 H6 PGE sing 375 n n C6 H62 PGE sing 376 n n C5 O3 PGE sing 377 n n C5 H5 PGE sing 378 n n C5 H52 PGE sing 379 n n # _atom_sites.entry_id 5IOQ _atom_sites.fract_transf_matrix[1][1] 0.018454 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008612 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007048 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 301 1 FAD FAD . F 3 PGE A 1 302 2 PGE PEG . G 3 PGE A 1 303 5 PGE PEG . H 3 PGE A 1 304 1 PGE PGE . I 3 PGE A 1 305 3 PGE PGE . J 3 PGE A 1 306 5 PGE PGE . K 2 FAD B 1 301 1 FAD FAD . L 4 DUR B 1 302 1 DUR DUR . M 4 DUR B 1 303 1 DUR DUR . N 3 PGE B 1 304 2 PGE PGE . O 3 PGE B 1 305 4 PGE PGE . P 2 FAD C 1 301 1 FAD FAD . Q 4 DUR C 1 302 1 DUR DUR . R 3 PGE C 1 303 6 PGE PEG . S 3 PGE C 1 304 6 PGE PGE . T 3 PGE C 1 305 7 PGE PGE . U 2 FAD D 1 301 1 FAD FAD . V 4 DUR D 1 302 1 DUR DUR . W 5 HOH A 1 401 69 HOH HOH . W 5 HOH A 2 402 206 HOH HOH . W 5 HOH A 3 403 144 HOH HOH . W 5 HOH A 4 404 35 HOH HOH . W 5 HOH A 5 405 43 HOH HOH . W 5 HOH A 6 406 55 HOH HOH . W 5 HOH A 7 407 197 HOH HOH . W 5 HOH A 8 408 9 HOH HOH . W 5 HOH A 9 409 14 HOH HOH . W 5 HOH A 10 410 86 HOH HOH . W 5 HOH A 11 411 129 HOH HOH . W 5 HOH A 12 412 136 HOH HOH . W 5 HOH A 13 413 72 HOH HOH . W 5 HOH A 14 414 50 HOH HOH . W 5 HOH A 15 415 103 HOH HOH . W 5 HOH A 16 416 109 HOH HOH . W 5 HOH A 17 417 113 HOH HOH . W 5 HOH A 18 418 8 HOH HOH . W 5 HOH A 19 419 18 HOH HOH . W 5 HOH A 20 420 49 HOH HOH . W 5 HOH A 21 421 37 HOH HOH . W 5 HOH A 22 422 30 HOH HOH . W 5 HOH A 23 423 98 HOH HOH . W 5 HOH A 24 424 39 HOH HOH . W 5 HOH A 25 425 132 HOH HOH . W 5 HOH A 26 426 33 HOH HOH . W 5 HOH A 27 427 44 HOH HOH . W 5 HOH A 28 428 149 HOH HOH . W 5 HOH A 29 429 133 HOH HOH . W 5 HOH A 30 430 212 HOH HOH . W 5 HOH A 31 431 213 HOH HOH . W 5 HOH A 32 432 187 HOH HOH . W 5 HOH A 33 433 60 HOH HOH . X 5 HOH B 1 401 194 HOH HOH . X 5 HOH B 2 402 84 HOH HOH . X 5 HOH B 3 403 68 HOH HOH . X 5 HOH B 4 404 61 HOH HOH . X 5 HOH B 5 405 166 HOH HOH . X 5 HOH B 6 406 79 HOH HOH . X 5 HOH B 7 407 83 HOH HOH . X 5 HOH B 8 408 32 HOH HOH . X 5 HOH B 9 409 112 HOH HOH . X 5 HOH B 10 410 95 HOH HOH . X 5 HOH B 11 411 108 HOH HOH . X 5 HOH B 12 412 91 HOH HOH . X 5 HOH B 13 413 15 HOH HOH . X 5 HOH B 14 414 156 HOH HOH . X 5 HOH B 15 415 140 HOH HOH . X 5 HOH B 16 416 169 HOH HOH . X 5 HOH B 17 417 200 HOH HOH . X 5 HOH B 18 418 214 HOH HOH . X 5 HOH B 19 419 135 HOH HOH . X 5 HOH B 20 420 20 HOH HOH . X 5 HOH B 21 421 25 HOH HOH . X 5 HOH B 22 422 77 HOH HOH . X 5 HOH B 23 423 70 HOH HOH . X 5 HOH B 24 424 117 HOH HOH . X 5 HOH B 25 425 107 HOH HOH . X 5 HOH B 26 426 93 HOH HOH . X 5 HOH B 27 427 34 HOH HOH . X 5 HOH B 28 428 22 HOH HOH . X 5 HOH B 29 429 124 HOH HOH . X 5 HOH B 30 430 51 HOH HOH . X 5 HOH B 31 431 104 HOH HOH . X 5 HOH B 32 432 100 HOH HOH . X 5 HOH B 33 433 184 HOH HOH . X 5 HOH B 34 434 139 HOH HOH . X 5 HOH B 35 435 57 HOH HOH . X 5 HOH B 36 436 162 HOH HOH . X 5 HOH B 37 437 11 HOH HOH . X 5 HOH B 38 438 155 HOH HOH . X 5 HOH B 39 439 3 HOH HOH . X 5 HOH B 40 440 148 HOH HOH . X 5 HOH B 41 441 128 HOH HOH . X 5 HOH B 42 442 160 HOH HOH . X 5 HOH B 43 443 41 HOH HOH . X 5 HOH B 44 444 120 HOH HOH . X 5 HOH B 45 445 215 HOH HOH . X 5 HOH B 46 446 153 HOH HOH . X 5 HOH B 47 447 121 HOH HOH . X 5 HOH B 48 448 158 HOH HOH . X 5 HOH B 49 449 154 HOH HOH . X 5 HOH B 50 450 192 HOH HOH . X 5 HOH B 51 451 191 HOH HOH . Y 5 HOH C 1 401 89 HOH HOH . Y 5 HOH C 2 402 181 HOH HOH . Y 5 HOH C 3 403 163 HOH HOH . Y 5 HOH C 4 404 195 HOH HOH . Y 5 HOH C 5 405 81 HOH HOH . Y 5 HOH C 6 406 94 HOH HOH . Y 5 HOH C 7 407 145 HOH HOH . Y 5 HOH C 8 408 90 HOH HOH . Y 5 HOH C 9 409 7 HOH HOH . Y 5 HOH C 10 410 114 HOH HOH . Y 5 HOH C 11 411 40 HOH HOH . Y 5 HOH C 12 412 47 HOH HOH . Y 5 HOH C 13 413 106 HOH HOH . Y 5 HOH C 14 414 31 HOH HOH . Y 5 HOH C 15 415 164 HOH HOH . Y 5 HOH C 16 416 157 HOH HOH . Y 5 HOH C 17 417 59 HOH HOH . Y 5 HOH C 18 418 10 HOH HOH . Y 5 HOH C 19 419 101 HOH HOH . Y 5 HOH C 20 420 186 HOH HOH . Y 5 HOH C 21 421 122 HOH HOH . Y 5 HOH C 22 422 96 HOH HOH . Y 5 HOH C 23 423 110 HOH HOH . Y 5 HOH C 24 424 42 HOH HOH . Y 5 HOH C 25 425 85 HOH HOH . Y 5 HOH C 26 426 6 HOH HOH . Y 5 HOH C 27 427 193 HOH HOH . Y 5 HOH C 28 428 5 HOH HOH . Y 5 HOH C 29 429 207 HOH HOH . Y 5 HOH C 30 430 26 HOH HOH . Y 5 HOH C 31 431 24 HOH HOH . Y 5 HOH C 32 432 74 HOH HOH . Y 5 HOH C 33 433 116 HOH HOH . Y 5 HOH C 34 434 185 HOH HOH . Y 5 HOH C 35 435 87 HOH HOH . Y 5 HOH C 36 436 150 HOH HOH . Y 5 HOH C 37 437 97 HOH HOH . Y 5 HOH C 38 438 2 HOH HOH . Y 5 HOH C 39 439 92 HOH HOH . Y 5 HOH C 40 440 28 HOH HOH . Y 5 HOH C 41 441 211 HOH HOH . Y 5 HOH C 42 442 99 HOH HOH . Y 5 HOH C 43 443 12 HOH HOH . Y 5 HOH C 44 444 38 HOH HOH . Y 5 HOH C 45 445 53 HOH HOH . Y 5 HOH C 46 446 182 HOH HOH . Y 5 HOH C 47 447 167 HOH HOH . Y 5 HOH C 48 448 152 HOH HOH . Y 5 HOH C 49 449 159 HOH HOH . Y 5 HOH C 50 450 210 HOH HOH . Y 5 HOH C 51 451 190 HOH HOH . Y 5 HOH C 52 452 188 HOH HOH . Y 5 HOH C 53 453 201 HOH HOH . Y 5 HOH C 54 454 189 HOH HOH . Y 5 HOH C 55 455 202 HOH HOH . Z 5 HOH D 1 401 78 HOH HOH . Z 5 HOH D 2 402 170 HOH HOH . Z 5 HOH D 3 403 54 HOH HOH . Z 5 HOH D 4 404 73 HOH HOH . Z 5 HOH D 5 405 52 HOH HOH . Z 5 HOH D 6 406 111 HOH HOH . Z 5 HOH D 7 407 13 HOH HOH . Z 5 HOH D 8 408 204 HOH HOH . Z 5 HOH D 9 409 138 HOH HOH . Z 5 HOH D 10 410 105 HOH HOH . Z 5 HOH D 11 411 134 HOH HOH . Z 5 HOH D 12 412 21 HOH HOH . Z 5 HOH D 13 413 125 HOH HOH . Z 5 HOH D 14 414 1 HOH HOH . Z 5 HOH D 15 415 115 HOH HOH . Z 5 HOH D 16 416 196 HOH HOH . Z 5 HOH D 17 417 17 HOH HOH . Z 5 HOH D 18 418 19 HOH HOH . Z 5 HOH D 19 419 75 HOH HOH . Z 5 HOH D 20 420 76 HOH HOH . Z 5 HOH D 21 421 82 HOH HOH . Z 5 HOH D 22 422 36 HOH HOH . Z 5 HOH D 23 423 48 HOH HOH . Z 5 HOH D 24 424 171 HOH HOH . Z 5 HOH D 25 425 4 HOH HOH . Z 5 HOH D 26 426 45 HOH HOH . Z 5 HOH D 27 427 23 HOH HOH . Z 5 HOH D 28 428 56 HOH HOH . Z 5 HOH D 29 429 27 HOH HOH . Z 5 HOH D 30 430 146 HOH HOH . Z 5 HOH D 31 431 151 HOH HOH . Z 5 HOH D 32 432 173 HOH HOH . Z 5 HOH D 33 433 71 HOH HOH . Z 5 HOH D 34 434 142 HOH HOH . Z 5 HOH D 35 435 147 HOH HOH . Z 5 HOH D 36 436 131 HOH HOH . Z 5 HOH D 37 437 137 HOH HOH . Z 5 HOH D 38 438 203 HOH HOH . Z 5 HOH D 39 439 119 HOH HOH . Z 5 HOH D 40 440 46 HOH HOH . Z 5 HOH D 41 441 216 HOH HOH . Z 5 HOH D 42 442 209 HOH HOH . Z 5 HOH D 43 443 198 HOH HOH . Z 5 HOH D 44 444 127 HOH HOH . Z 5 HOH D 45 445 208 HOH HOH . Z 5 HOH D 46 446 199 HOH HOH . Z 5 HOH D 47 447 205 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . R 3 -5.426 13.111 19.485 1 56.38 ? C1 PGE 303 C 1 HETATM 2 O O1 PGE . . . R 3 -6.245 13.02 20.66 1 62.14 ? O1 PGE 303 C 1 HETATM 3 C C2 PGE . . . R 3 -5.015 11.715 18.996 1 54.42 ? C2 PGE 303 C 1 HETATM 4 O O2 PGE . . . R 3 -5.454 11.499 17.655 1 57.06 ? O2 PGE 303 C 1 HETATM 5 C C3 PGE . . . R 3 -6.877 11.456 17.411 1 56.11 ? C3 PGE 303 C 1 HETATM 6 C C4 PGE . . . R 3 -7.146 10.953 15.999 1 58.78 ? C4 PGE 303 C 1 HETATM 7 O O3 PGE . . . R 3 -6.897 11.975 15.024 1 62.21 ? O3 PGE 303 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 7 #