data_5IOS # _model_server_result.job_id TgbA9u8Mj_sVFsMbP6tRTw _model_server_result.datetime_utc '2024-11-24 20:51:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ios # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":301}' # _entry.id 5IOS # _exptl.entry_id 5IOS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5IOS _cell.length_a 54.071 _cell.length_b 116.217 _cell.length_c 141.007 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IOS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 5IOS _atom_sites.fract_transf_matrix[1][1] 0.018494 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008605 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007092 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 301 1 FAD FAD . F 3 UMP A 1 302 1 UMP UMP . G 3 UMP A 1 303 1 UMP UMP . H 2 FAD B 1 301 1 FAD FAD . I 2 FAD C 1 301 1 FAD FAD . J 3 UMP C 1 302 1 UMP UMP . K 2 FAD D 1 301 1 FAD FAD . L 3 UMP D 1 302 1 UMP UMP . M 4 HOH A 1 401 127 HOH HOH . M 4 HOH A 2 402 94 HOH HOH . M 4 HOH A 3 403 95 HOH HOH . M 4 HOH A 4 404 136 HOH HOH . M 4 HOH A 5 405 98 HOH HOH . M 4 HOH A 6 406 67 HOH HOH . M 4 HOH A 7 407 17 HOH HOH . M 4 HOH A 8 408 40 HOH HOH . M 4 HOH A 9 409 21 HOH HOH . M 4 HOH A 10 410 71 HOH HOH . M 4 HOH A 11 411 49 HOH HOH . M 4 HOH A 12 412 100 HOH HOH . M 4 HOH A 13 413 128 HOH HOH . M 4 HOH A 14 414 62 HOH HOH . M 4 HOH A 15 415 77 HOH HOH . M 4 HOH A 16 416 7 HOH HOH . M 4 HOH A 17 417 78 HOH HOH . M 4 HOH A 18 418 57 HOH HOH . M 4 HOH A 19 419 22 HOH HOH . M 4 HOH A 20 420 25 HOH HOH . M 4 HOH A 21 421 16 HOH HOH . M 4 HOH A 22 422 15 HOH HOH . M 4 HOH A 23 423 72 HOH HOH . M 4 HOH A 24 424 80 HOH HOH . M 4 HOH A 25 425 137 HOH HOH . M 4 HOH A 26 426 88 HOH HOH . M 4 HOH A 27 427 37 HOH HOH . M 4 HOH A 28 428 101 HOH HOH . M 4 HOH A 29 429 31 HOH HOH . M 4 HOH A 30 430 97 HOH HOH . M 4 HOH A 31 431 140 HOH HOH . M 4 HOH A 32 432 141 HOH HOH . M 4 HOH A 33 433 48 HOH HOH . M 4 HOH A 34 434 142 HOH HOH . M 4 HOH A 35 435 89 HOH HOH . M 4 HOH A 36 436 90 HOH HOH . M 4 HOH A 37 437 143 HOH HOH . N 4 HOH B 1 401 139 HOH HOH . N 4 HOH B 2 402 144 HOH HOH . N 4 HOH B 3 403 70 HOH HOH . N 4 HOH B 4 404 121 HOH HOH . N 4 HOH B 5 405 52 HOH HOH . N 4 HOH B 6 406 122 HOH HOH . N 4 HOH B 7 407 20 HOH HOH . N 4 HOH B 8 408 11 HOH HOH . N 4 HOH B 9 409 130 HOH HOH . N 4 HOH B 10 410 112 HOH HOH . N 4 HOH B 11 411 73 HOH HOH . N 4 HOH B 12 412 138 HOH HOH . N 4 HOH B 13 413 18 HOH HOH . N 4 HOH B 14 414 13 HOH HOH . N 4 HOH B 15 415 14 HOH HOH . N 4 HOH B 16 416 91 HOH HOH . N 4 HOH B 17 417 109 HOH HOH . N 4 HOH B 18 418 9 HOH HOH . N 4 HOH B 19 419 34 HOH HOH . N 4 HOH B 20 420 43 HOH HOH . N 4 HOH B 21 421 32 HOH HOH . N 4 HOH B 22 422 64 HOH HOH . N 4 HOH B 23 423 55 HOH HOH . N 4 HOH B 24 424 24 HOH HOH . N 4 HOH B 25 425 145 HOH HOH . N 4 HOH B 26 426 3 HOH HOH . N 4 HOH B 27 427 126 HOH HOH . N 4 HOH B 28 428 105 HOH HOH . N 4 HOH B 29 429 125 HOH HOH . O 4 HOH C 1 401 129 HOH HOH . O 4 HOH C 2 402 106 HOH HOH . O 4 HOH C 3 403 39 HOH HOH . O 4 HOH C 4 404 29 HOH HOH . O 4 HOH C 5 405 28 HOH HOH . O 4 HOH C 6 406 82 HOH HOH . O 4 HOH C 7 407 35 HOH HOH . O 4 HOH C 8 408 12 HOH HOH . O 4 HOH C 9 409 115 HOH HOH . O 4 HOH C 10 410 114 HOH HOH . O 4 HOH C 11 411 116 HOH HOH . O 4 HOH C 12 412 99 HOH HOH . O 4 HOH C 13 413 33 HOH HOH . O 4 HOH C 14 414 54 HOH HOH . O 4 HOH C 15 415 74 HOH HOH . O 4 HOH C 16 416 38 HOH HOH . O 4 HOH C 17 417 50 HOH HOH . O 4 HOH C 18 418 6 HOH HOH . O 4 HOH C 19 419 4 HOH HOH . O 4 HOH C 20 420 41 HOH HOH . O 4 HOH C 21 421 61 HOH HOH . O 4 HOH C 22 422 107 HOH HOH . O 4 HOH C 23 423 19 HOH HOH . O 4 HOH C 24 424 36 HOH HOH . O 4 HOH C 25 425 30 HOH HOH . O 4 HOH C 26 426 118 HOH HOH . O 4 HOH C 27 427 123 HOH HOH . O 4 HOH C 28 428 124 HOH HOH . O 4 HOH C 29 429 108 HOH HOH . O 4 HOH C 30 430 96 HOH HOH . O 4 HOH C 31 431 75 HOH HOH . O 4 HOH C 32 432 131 HOH HOH . O 4 HOH C 33 433 79 HOH HOH . O 4 HOH C 34 434 93 HOH HOH . O 4 HOH C 35 435 132 HOH HOH . O 4 HOH C 36 436 58 HOH HOH . O 4 HOH C 37 437 111 HOH HOH . O 4 HOH C 38 438 110 HOH HOH . O 4 HOH C 39 439 68 HOH HOH . O 4 HOH C 40 440 92 HOH HOH . O 4 HOH C 41 441 65 HOH HOH . P 4 HOH D 1 401 42 HOH HOH . P 4 HOH D 2 402 81 HOH HOH . P 4 HOH D 3 403 117 HOH HOH . P 4 HOH D 4 404 60 HOH HOH . P 4 HOH D 5 405 5 HOH HOH . P 4 HOH D 6 406 76 HOH HOH . P 4 HOH D 7 407 23 HOH HOH . P 4 HOH D 8 408 10 HOH HOH . P 4 HOH D 9 409 133 HOH HOH . P 4 HOH D 10 410 87 HOH HOH . P 4 HOH D 11 411 135 HOH HOH . P 4 HOH D 12 412 8 HOH HOH . P 4 HOH D 13 413 56 HOH HOH . P 4 HOH D 14 414 119 HOH HOH . P 4 HOH D 15 415 26 HOH HOH . P 4 HOH D 16 416 46 HOH HOH . P 4 HOH D 17 417 27 HOH HOH . P 4 HOH D 18 418 134 HOH HOH . P 4 HOH D 19 419 47 HOH HOH . P 4 HOH D 20 420 113 HOH HOH . P 4 HOH D 21 421 66 HOH HOH . P 4 HOH D 22 422 103 HOH HOH . P 4 HOH D 23 423 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . K 2 13.765 17.614 31.418 1 22.92 ? PA FAD 301 D 1 HETATM 2 O O1A FAD . . . K 2 12.681 18.658 31.585 1 22.36 ? O1A FAD 301 D 1 HETATM 3 O O2A FAD . . . K 2 13.661 16.284 32.136 1 21.73 ? O2A FAD 301 D 1 HETATM 4 O O5B FAD . . . K 2 13.964 17.353 29.88 1 23.6 ? O5B FAD 301 D 1 HETATM 5 C C5B FAD . . . K 2 14.91 16.352 29.454 1 24.47 ? C5B FAD 301 D 1 HETATM 6 C C4B FAD . . . K 2 15.306 16.628 28.035 1 24.93 ? C4B FAD 301 D 1 HETATM 7 O O4B FAD . . . K 2 14.166 16.54 27.157 1 23.76 ? O4B FAD 301 D 1 HETATM 8 C C3B FAD . . . K 2 15.885 18.025 27.857 1 25.59 ? C3B FAD 301 D 1 HETATM 9 O O3B FAD . . . K 2 17.291 18.005 28.062 1 26.6 ? O3B FAD 301 D 1 HETATM 10 C C2B FAD . . . K 2 15.504 18.397 26.448 1 24.82 ? C2B FAD 301 D 1 HETATM 11 O O2B FAD . . . K 2 16.364 17.75 25.497 1 25.07 ? O2B FAD 301 D 1 HETATM 12 C C1B FAD . . . K 2 14.173 17.703 26.308 1 24.21 ? C1B FAD 301 D 1 HETATM 13 N N9A FAD . . . K 2 12.95 18.489 26.519 1 24.53 ? N9A FAD 301 D 1 HETATM 14 C C8A FAD . . . K 2 11.959 18.203 27.41 1 26.23 ? C8A FAD 301 D 1 HETATM 15 N N7A FAD . . . K 2 10.908 19.047 27.256 1 25.47 ? N7A FAD 301 D 1 HETATM 16 C C5A FAD . . . K 2 11.227 19.86 26.221 1 24.68 ? C5A FAD 301 D 1 HETATM 17 C C6A FAD . . . K 2 10.547 20.966 25.532 1 24.51 ? C6A FAD 301 D 1 HETATM 18 N N6A FAD . . . K 2 9.32 21.307 25.979 1 22.7 ? N6A FAD 301 D 1 HETATM 19 N N1A FAD . . . K 2 11.192 21.55 24.489 1 25.04 ? N1A FAD 301 D 1 HETATM 20 C C2A FAD . . . K 2 12.428 21.165 24.089 1 22.76 ? C2A FAD 301 D 1 HETATM 21 N N3A FAD . . . K 2 13.091 20.152 24.659 1 24.31 ? N3A FAD 301 D 1 HETATM 22 C C4A FAD . . . K 2 12.55 19.489 25.72 1 24.65 ? C4A FAD 301 D 1 HETATM 23 N N1 FAD . . . K 2 15.345 27.053 35.918 1 27.51 ? N1 FAD 301 D 1 HETATM 24 C C2 FAD . . . K 2 14.814 28.301 35.995 1 27.59 ? C2 FAD 301 D 1 HETATM 25 O O2 FAD . . . K 2 13.626 28.506 35.613 1 26.08 ? O2 FAD 301 D 1 HETATM 26 N N3 FAD . . . K 2 15.541 29.323 36.482 1 26.59 ? N3 FAD 301 D 1 HETATM 27 C C4 FAD . . . K 2 16.81 29.198 36.918 1 27.65 ? C4 FAD 301 D 1 HETATM 28 O O4 FAD . . . K 2 17.462 30.144 37.384 1 27.98 ? O4 FAD 301 D 1 HETATM 29 C C4X FAD . . . K 2 17.456 27.88 36.871 1 25.11 ? C4X FAD 301 D 1 HETATM 30 N N5 FAD . . . K 2 18.721 27.699 37.299 1 24.38 ? N5 FAD 301 D 1 HETATM 31 C C5X FAD . . . K 2 19.264 26.456 37.242 1 25.72 ? C5X FAD 301 D 1 HETATM 32 C C6 FAD . . . K 2 20.578 26.261 37.695 1 26.62 ? C6 FAD 301 D 1 HETATM 33 C C7 FAD . . . K 2 21.139 24.991 37.642 1 27.4 ? C7 FAD 301 D 1 HETATM 34 C C7M FAD . . . K 2 22.55 24.746 38.128 1 28.01 ? C7M FAD 301 D 1 HETATM 35 C C8 FAD . . . K 2 20.366 23.848 37.117 1 26.9 ? C8 FAD 301 D 1 HETATM 36 C C8M FAD . . . K 2 20.989 22.463 37.05 1 27.98 ? C8M FAD 301 D 1 HETATM 37 C C9 FAD . . . K 2 19.054 24.038 36.673 1 26.29 ? C9 FAD 301 D 1 HETATM 38 C C9A FAD . . . K 2 18.485 25.314 36.712 1 23.6 ? C9A FAD 301 D 1 HETATM 39 N N10 FAD . . . K 2 17.158 25.531 36.262 1 24.79 ? N10 FAD 301 D 1 HETATM 40 C C10 FAD . . . K 2 16.619 26.803 36.332 1 24.65 ? C10 FAD 301 D 1 HETATM 41 C C1' FAD . . . K 2 16.336 24.457 35.745 1 22.35 ? C1' FAD 301 D 1 HETATM 42 C C2' FAD . . . K 2 16.696 24.159 34.313 1 23.6 ? C2' FAD 301 D 1 HETATM 43 O O2' FAD . . . K 2 16.469 25.322 33.498 1 26.74 ? O2' FAD 301 D 1 HETATM 44 C C3' FAD . . . K 2 15.877 22.976 33.821 1 24.45 ? C3' FAD 301 D 1 HETATM 45 O O3' FAD . . . K 2 14.509 23.283 34.073 1 23.23 ? O3' FAD 301 D 1 HETATM 46 C C4' FAD . . . K 2 16.192 21.673 34.576 1 26.36 ? C4' FAD 301 D 1 HETATM 47 O O4' FAD . . . K 2 17.593 21.523 34.703 1 28.39 ? O4' FAD 301 D 1 HETATM 48 C C5' FAD . . . K 2 15.655 20.462 33.844 1 27.18 ? C5' FAD 301 D 1 HETATM 49 O O5' FAD . . . K 2 16.522 20.218 32.735 1 28.78 ? O5' FAD 301 D 1 HETATM 50 P P FAD . . . K 2 15.929 19.651 31.372 1 25.09 ? P FAD 301 D 1 HETATM 51 O O1P FAD . . . K 2 14.976 20.521 30.61 1 26.13 ? O1P FAD 301 D 1 HETATM 52 O O2P FAD . . . K 2 17.185 19.237 30.665 1 26.97 ? O2P FAD 301 D 1 HETATM 53 O O3P FAD . . . K 2 15.187 18.273 31.84 1 24.17 ? O3P FAD 301 D 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 53 #