data_5IPF
#
_model_server_result.job_id            w-GspMky1NuQUx12Qza-ww 
_model_server_result.datetime_utc      '2024-11-28 21:33:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ipf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1300}' 
#
_entry.id    5IPF 
#
_exptl.entry_id    5IPF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              348.206 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'INOSINIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5IPF 
_cell.length_a            59.953 
_cell.length_b            117.957 
_cell.length_c            139.366 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5IPF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C10 H13 N4 O8 P' 
_chem_comp.formula_weight    348.206 
_chem_comp.id                IMP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'INOSINIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P IMP doub 173 n n 
P O2P IMP sing 174 n n 
P O3P IMP sing 175 n n 
P O5' IMP sing 176 n n 
O2P HOP2 IMP sing 177 n n 
O3P HOP3 IMP sing 178 n n 
O5' C5' IMP sing 179 n n 
C5' C4' IMP sing 180 n n 
C5' "H5'1" IMP sing 181 n n 
C5' "H5'2" IMP sing 182 n n 
C4' O4' IMP sing 183 n n 
C4' C3' IMP sing 184 n n 
C4' H4' IMP sing 185 n n 
O4' C1' IMP sing 186 n n 
C3' O3' IMP sing 187 n n 
C3' C2' IMP sing 188 n n 
C3' H3' IMP sing 189 n n 
O3' HO3' IMP sing 190 n n 
C2' O2' IMP sing 191 n n 
C2' C1' IMP sing 192 n n 
C2' H2' IMP sing 193 n n 
O2' HO2' IMP sing 194 n n 
C1' N9 IMP sing 195 n n 
C1' H1' IMP sing 196 n n 
N9 C8 IMP sing 197 n y 
N9 C4 IMP sing 198 n y 
C8 N7 IMP doub 199 n y 
C8 H8 IMP sing 200 n n 
N7 C5 IMP sing 201 n y 
C5 C6 IMP sing 202 n n 
C5 C4 IMP doub 203 n y 
C6 O6 IMP doub 204 n n 
C6 N1 IMP sing 205 n n 
N1 C2 IMP sing 206 n n 
N1 HN1 IMP sing 207 n n 
C2 N3 IMP doub 208 n n 
C2 H2 IMP sing 209 n n 
N3 C4 IMP sing 210 n n 
#
_atom_sites.entry_id                     5IPF 
_atom_sites.fract_transf_matrix[1][1]    0.01668 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008478 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007175 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 IMP A 1 1300 1300 IMP IMP . 
F 2 IMP B 1 1300 1300 IMP IMP . 
G 2 IMP C 1 1300 1300 IMP IMP . 
H 2 IMP D 1 1300 1300 IMP IMP . 
I 3 HOH A 1 1401 63 HOH HOH . 
I 3 HOH A 2 1402 48 HOH HOH . 
I 3 HOH A 3 1403 119 HOH HOH . 
I 3 HOH A 4 1404 24 HOH HOH . 
I 3 HOH A 5 1405 68 HOH HOH . 
I 3 HOH A 6 1406 1 HOH HOH . 
I 3 HOH A 7 1407 104 HOH HOH . 
I 3 HOH A 8 1408 2 HOH HOH . 
I 3 HOH A 9 1409 54 HOH HOH . 
I 3 HOH A 10 1410 103 HOH HOH . 
I 3 HOH A 11 1411 30 HOH HOH . 
I 3 HOH A 12 1412 79 HOH HOH . 
I 3 HOH A 13 1413 25 HOH HOH . 
I 3 HOH A 14 1414 55 HOH HOH . 
I 3 HOH A 15 1415 99 HOH HOH . 
I 3 HOH A 16 1416 62 HOH HOH . 
I 3 HOH A 17 1417 85 HOH HOH . 
I 3 HOH A 18 1418 12 HOH HOH . 
I 3 HOH A 19 1419 37 HOH HOH . 
I 3 HOH A 20 1420 117 HOH HOH . 
I 3 HOH A 21 1421 29 HOH HOH . 
I 3 HOH A 22 1422 28 HOH HOH . 
I 3 HOH A 23 1423 19 HOH HOH . 
I 3 HOH A 24 1424 23 HOH HOH . 
I 3 HOH A 25 1425 102 HOH HOH . 
I 3 HOH A 26 1426 13 HOH HOH . 
I 3 HOH A 27 1427 114 HOH HOH . 
I 3 HOH A 28 1428 95 HOH HOH . 
I 3 HOH A 29 1429 118 HOH HOH . 
I 3 HOH A 30 1430 5 HOH HOH . 
I 3 HOH A 31 1431 67 HOH HOH . 
I 3 HOH A 32 1432 107 HOH HOH . 
I 3 HOH A 33 1433 84 HOH HOH . 
I 3 HOH A 34 1434 35 HOH HOH . 
I 3 HOH A 35 1435 100 HOH HOH . 
I 3 HOH A 36 1436 39 HOH HOH . 
I 3 HOH A 37 1437 74 HOH HOH . 
I 3 HOH A 38 1438 27 HOH HOH . 
J 3 HOH B 1 1401 4 HOH HOH . 
J 3 HOH B 2 1402 7 HOH HOH . 
J 3 HOH B 3 1403 21 HOH HOH . 
J 3 HOH B 4 1404 72 HOH HOH . 
J 3 HOH B 5 1405 105 HOH HOH . 
J 3 HOH B 6 1406 20 HOH HOH . 
J 3 HOH B 7 1407 66 HOH HOH . 
J 3 HOH B 8 1408 123 HOH HOH . 
J 3 HOH B 9 1409 3 HOH HOH . 
J 3 HOH B 10 1410 34 HOH HOH . 
J 3 HOH B 11 1411 10 HOH HOH . 
J 3 HOH B 12 1412 97 HOH HOH . 
J 3 HOH B 13 1413 116 HOH HOH . 
J 3 HOH B 14 1414 78 HOH HOH . 
J 3 HOH B 15 1415 14 HOH HOH . 
J 3 HOH B 16 1416 101 HOH HOH . 
J 3 HOH B 17 1417 58 HOH HOH . 
J 3 HOH B 18 1418 113 HOH HOH . 
J 3 HOH B 19 1419 71 HOH HOH . 
J 3 HOH B 20 1420 96 HOH HOH . 
J 3 HOH B 21 1421 41 HOH HOH . 
J 3 HOH B 22 1422 61 HOH HOH . 
J 3 HOH B 23 1423 89 HOH HOH . 
J 3 HOH B 24 1424 120 HOH HOH . 
J 3 HOH B 25 1425 60 HOH HOH . 
J 3 HOH B 26 1426 80 HOH HOH . 
K 3 HOH C 1 1401 83 HOH HOH . 
K 3 HOH C 2 1402 8 HOH HOH . 
K 3 HOH C 3 1403 82 HOH HOH . 
K 3 HOH C 4 1404 33 HOH HOH . 
K 3 HOH C 5 1405 121 HOH HOH . 
K 3 HOH C 6 1406 59 HOH HOH . 
K 3 HOH C 7 1407 77 HOH HOH . 
K 3 HOH C 8 1408 122 HOH HOH . 
K 3 HOH C 9 1409 112 HOH HOH . 
K 3 HOH C 10 1410 76 HOH HOH . 
K 3 HOH C 11 1411 115 HOH HOH . 
K 3 HOH C 12 1412 15 HOH HOH . 
K 3 HOH C 13 1413 64 HOH HOH . 
K 3 HOH C 14 1414 88 HOH HOH . 
K 3 HOH C 15 1415 86 HOH HOH . 
K 3 HOH C 16 1416 75 HOH HOH . 
K 3 HOH C 17 1417 18 HOH HOH . 
K 3 HOH C 18 1418 16 HOH HOH . 
K 3 HOH C 19 1419 98 HOH HOH . 
K 3 HOH C 20 1420 32 HOH HOH . 
K 3 HOH C 21 1421 92 HOH HOH . 
K 3 HOH C 22 1422 106 HOH HOH . 
K 3 HOH C 23 1423 111 HOH HOH . 
K 3 HOH C 24 1424 91 HOH HOH . 
K 3 HOH C 25 1425 38 HOH HOH . 
K 3 HOH C 26 1426 124 HOH HOH . 
K 3 HOH C 27 1427 69 HOH HOH . 
K 3 HOH C 28 1428 11 HOH HOH . 
L 3 HOH D 1 1401 57 HOH HOH . 
L 3 HOH D 2 1402 45 HOH HOH . 
L 3 HOH D 3 1403 53 HOH HOH . 
L 3 HOH D 4 1404 65 HOH HOH . 
L 3 HOH D 5 1405 52 HOH HOH . 
L 3 HOH D 6 1406 108 HOH HOH . 
L 3 HOH D 7 1407 17 HOH HOH . 
L 3 HOH D 8 1408 110 HOH HOH . 
L 3 HOH D 9 1409 73 HOH HOH . 
L 3 HOH D 10 1410 87 HOH HOH . 
L 3 HOH D 11 1411 50 HOH HOH . 
L 3 HOH D 12 1412 49 HOH HOH . 
L 3 HOH D 13 1413 47 HOH HOH . 
L 3 HOH D 14 1414 43 HOH HOH . 
L 3 HOH D 15 1415 90 HOH HOH . 
L 3 HOH D 16 1416 56 HOH HOH . 
L 3 HOH D 17 1417 94 HOH HOH . 
L 3 HOH D 18 1418 46 HOH HOH . 
L 3 HOH D 19 1419 44 HOH HOH . 
L 3 HOH D 20 1420 26 HOH HOH . 
L 3 HOH D 21 1421 81 HOH HOH . 
L 3 HOH D 22 1422 42 HOH HOH . 
L 3 HOH D 23 1423 6 HOH HOH . 
L 3 HOH D 24 1424 22 HOH HOH . 
L 3 HOH D 25 1425 40 HOH HOH . 
L 3 HOH D 26 1426 70 HOH HOH . 
L 3 HOH D 27 1427 51 HOH HOH . 
L 3 HOH D 28 1428 109 HOH HOH . 
L 3 HOH D 29 1429 36 HOH HOH . 
L 3 HOH D 30 1430 9 HOH HOH . 
L 3 HOH D 31 1431 31 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P IMP . . . E 2 -3.573 -9.43 11.579 1 71.06 ? P IMP 1300 A 1 
HETATM 2 O O1P IMP . . . E 2 -2.936 -8.164 11.056 1 77.94 -1 O1P IMP 1300 A 1 
HETATM 3 O O2P IMP . . . E 2 -4.727 -9.31 12.545 1 67.71 ? O2P IMP 1300 A 1 
HETATM 4 O O3P IMP . . . E 2 -2.491 -10.235 12.259 1 90.48 ? O3P IMP 1300 A 1 
HETATM 5 O O5' IMP . . . E 2 -4.119 -10.254 10.327 1 79.15 ? O5' IMP 1300 A 1 
HETATM 6 C C5' IMP . . . E 2 -5.44 -10.786 10.336 1 76.54 ? C5' IMP 1300 A 1 
HETATM 7 C C4' IMP . . . E 2 -5.685 -11.767 9.213 1 68.65 ? C4' IMP 1300 A 1 
HETATM 8 O O4' IMP . . . E 2 -7.109 -11.947 9.056 1 64.09 ? O4' IMP 1300 A 1 
HETATM 9 C C3' IMP . . . E 2 -5.174 -11.365 7.841 1 75.32 ? C3' IMP 1300 A 1 
HETATM 10 O O3' IMP . . . E 2 -4.957 -12.535 7.053 1 82.05 ? O3' IMP 1300 A 1 
HETATM 11 C C2' IMP . . . E 2 -6.345 -10.571 7.262 1 75.28 ? C2' IMP 1300 A 1 
HETATM 12 O O2' IMP . . . E 2 -6.446 -10.629 5.855 1 79.89 ? O2' IMP 1300 A 1 
HETATM 13 C C1' IMP . . . E 2 -7.574 -11.203 7.94 1 65.79 ? C1' IMP 1300 A 1 
HETATM 14 N N9 IMP . . . E 2 -8.533 -10.21 8.436 1 55.39 ? N9 IMP 1300 A 1 
HETATM 15 C C8 IMP . . . E 2 -8.319 -9.352 9.484 1 53.75 ? C8 IMP 1300 A 1 
HETATM 16 N N7 IMP . . . E 2 -9.417 -8.586 9.653 1 52.74 ? N7 IMP 1300 A 1 
HETATM 17 C C5 IMP . . . E 2 -10.336 -8.942 8.73 1 58.66 ? C5 IMP 1300 A 1 
HETATM 18 C C6 IMP . . . E 2 -11.619 -8.477 8.469 1 56.07 ? C6 IMP 1300 A 1 
HETATM 19 O O6 IMP . . . E 2 -12.122 -7.613 9.187 1 51.7 ? O6 IMP 1300 A 1 
HETATM 20 N N1 IMP . . . E 2 -12.347 -9.037 7.439 1 52.9 ? N1 IMP 1300 A 1 
HETATM 21 C C2 IMP . . . E 2 -11.797 -10.05 6.68 1 53.19 ? C2 IMP 1300 A 1 
HETATM 22 N N3 IMP . . . E 2 -10.521 -10.506 6.946 1 53.55 ? N3 IMP 1300 A 1 
HETATM 23 C C4 IMP . . . E 2 -9.797 -9.962 7.956 1 55.45 ? C4 IMP 1300 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           23 
#