data_5IPJ
#
_model_server_result.job_id            2mWgdK-iF8bj7Qr1ylT0Rw 
_model_server_result.datetime_utc      '2024-11-29 20:57:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ipj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    5IPJ 
#
_exptl.entry_id    5IPJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5IPJ 
_cell.length_a            97.408 
_cell.length_b            97.408 
_cell.length_c            80.663 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5IPJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 182 n n 
C1 C2 GOL sing 183 n n 
C1 H11 GOL sing 184 n n 
C1 H12 GOL sing 185 n n 
O1 HO1 GOL sing 186 n n 
C2 O2 GOL sing 187 n n 
C2 C3 GOL sing 188 n n 
C2 H2 GOL sing 189 n n 
O2 HO2 GOL sing 190 n n 
C3 O3 GOL sing 191 n n 
C3 H31 GOL sing 192 n n 
C3 H32 GOL sing 193 n n 
O3 HO3 GOL sing 194 n n 
#
_atom_sites.entry_id                     5IPJ 
_atom_sites.fract_transf_matrix[1][1]    0.010266 
_atom_sites.fract_transf_matrix[1][2]    0.005927 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011854 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012397 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 6CD A 1 401 1 6CD UNL . 
C 3 GOL A 1 402 1 GOL GOL . 
D 3 GOL A 1 403 2 GOL GOL . 
E 3 GOL A 1 404 3 GOL GOL . 
F 4 HOH A 1 501 26 HOH HOH . 
F 4 HOH A 2 502 23 HOH HOH . 
F 4 HOH A 3 503 129 HOH HOH . 
F 4 HOH A 4 504 164 HOH HOH . 
F 4 HOH A 5 505 108 HOH HOH . 
F 4 HOH A 6 506 115 HOH HOH . 
F 4 HOH A 7 507 87 HOH HOH . 
F 4 HOH A 8 508 51 HOH HOH . 
F 4 HOH A 9 509 130 HOH HOH . 
F 4 HOH A 10 510 82 HOH HOH . 
F 4 HOH A 11 511 56 HOH HOH . 
F 4 HOH A 12 512 21 HOH HOH . 
F 4 HOH A 13 513 89 HOH HOH . 
F 4 HOH A 14 514 95 HOH HOH . 
F 4 HOH A 15 515 50 HOH HOH . 
F 4 HOH A 16 516 114 HOH HOH . 
F 4 HOH A 17 517 106 HOH HOH . 
F 4 HOH A 18 518 20 HOH HOH . 
F 4 HOH A 19 519 37 HOH HOH . 
F 4 HOH A 20 520 42 HOH HOH . 
F 4 HOH A 21 521 13 HOH HOH . 
F 4 HOH A 22 522 145 HOH HOH . 
F 4 HOH A 23 523 84 HOH HOH . 
F 4 HOH A 24 524 100 HOH HOH . 
F 4 HOH A 25 525 32 HOH HOH . 
F 4 HOH A 26 526 112 HOH HOH . 
F 4 HOH A 27 527 64 HOH HOH . 
F 4 HOH A 28 528 109 HOH HOH . 
F 4 HOH A 29 529 111 HOH HOH . 
F 4 HOH A 30 530 43 HOH HOH . 
F 4 HOH A 31 531 53 HOH HOH . 
F 4 HOH A 32 532 105 HOH HOH . 
F 4 HOH A 33 533 25 HOH HOH . 
F 4 HOH A 34 534 44 HOH HOH . 
F 4 HOH A 35 535 22 HOH HOH . 
F 4 HOH A 36 536 147 HOH HOH . 
F 4 HOH A 37 537 41 HOH HOH . 
F 4 HOH A 38 538 69 HOH HOH . 
F 4 HOH A 39 539 113 HOH HOH . 
F 4 HOH A 40 540 60 HOH HOH . 
F 4 HOH A 41 541 107 HOH HOH . 
F 4 HOH A 42 542 139 HOH HOH . 
F 4 HOH A 43 543 78 HOH HOH . 
F 4 HOH A 44 544 9 HOH HOH . 
F 4 HOH A 45 545 17 HOH HOH . 
F 4 HOH A 46 546 160 HOH HOH . 
F 4 HOH A 47 547 90 HOH HOH . 
F 4 HOH A 48 548 156 HOH HOH . 
F 4 HOH A 49 549 67 HOH HOH . 
F 4 HOH A 50 550 83 HOH HOH . 
F 4 HOH A 51 551 7 HOH HOH . 
F 4 HOH A 52 552 97 HOH HOH . 
F 4 HOH A 53 553 55 HOH HOH . 
F 4 HOH A 54 554 128 HOH HOH . 
F 4 HOH A 55 555 11 HOH HOH . 
F 4 HOH A 56 556 71 HOH HOH . 
F 4 HOH A 57 557 3 HOH HOH . 
F 4 HOH A 58 558 30 HOH HOH . 
F 4 HOH A 59 559 120 HOH HOH . 
F 4 HOH A 60 560 33 HOH HOH . 
F 4 HOH A 61 561 80 HOH HOH . 
F 4 HOH A 62 562 39 HOH HOH . 
F 4 HOH A 63 563 38 HOH HOH . 
F 4 HOH A 64 564 148 HOH HOH . 
F 4 HOH A 65 565 99 HOH HOH . 
F 4 HOH A 66 566 103 HOH HOH . 
F 4 HOH A 67 567 153 HOH HOH . 
F 4 HOH A 68 568 85 HOH HOH . 
F 4 HOH A 69 569 4 HOH HOH . 
F 4 HOH A 70 570 19 HOH HOH . 
F 4 HOH A 71 571 146 HOH HOH . 
F 4 HOH A 72 572 35 HOH HOH . 
F 4 HOH A 73 573 135 HOH HOH . 
F 4 HOH A 74 574 150 HOH HOH . 
F 4 HOH A 75 575 49 HOH HOH . 
F 4 HOH A 76 576 119 HOH HOH . 
F 4 HOH A 77 577 57 HOH HOH . 
F 4 HOH A 78 578 75 HOH HOH . 
F 4 HOH A 79 579 74 HOH HOH . 
F 4 HOH A 80 580 72 HOH HOH . 
F 4 HOH A 81 581 66 HOH HOH . 
F 4 HOH A 82 582 52 HOH HOH . 
F 4 HOH A 83 583 88 HOH HOH . 
F 4 HOH A 84 584 98 HOH HOH . 
F 4 HOH A 85 585 94 HOH HOH . 
F 4 HOH A 86 586 34 HOH HOH . 
F 4 HOH A 87 587 58 HOH HOH . 
F 4 HOH A 88 588 59 HOH HOH . 
F 4 HOH A 89 589 96 HOH HOH . 
F 4 HOH A 90 590 65 HOH HOH . 
F 4 HOH A 91 591 141 HOH HOH . 
F 4 HOH A 92 592 29 HOH HOH . 
F 4 HOH A 93 593 134 HOH HOH . 
F 4 HOH A 94 594 73 HOH HOH . 
F 4 HOH A 95 595 12 HOH HOH . 
F 4 HOH A 96 596 8 HOH HOH . 
F 4 HOH A 97 597 121 HOH HOH . 
F 4 HOH A 98 598 125 HOH HOH . 
F 4 HOH A 99 599 81 HOH HOH . 
F 4 HOH A 100 600 61 HOH HOH . 
F 4 HOH A 101 601 16 HOH HOH . 
F 4 HOH A 102 602 138 HOH HOH . 
F 4 HOH A 103 603 18 HOH HOH . 
F 4 HOH A 104 604 45 HOH HOH . 
F 4 HOH A 105 605 91 HOH HOH . 
F 4 HOH A 106 606 157 HOH HOH . 
F 4 HOH A 107 607 63 HOH HOH . 
F 4 HOH A 108 608 101 HOH HOH . 
F 4 HOH A 109 609 36 HOH HOH . 
F 4 HOH A 110 610 102 HOH HOH . 
F 4 HOH A 111 611 15 HOH HOH . 
F 4 HOH A 112 612 162 HOH HOH . 
F 4 HOH A 113 613 68 HOH HOH . 
F 4 HOH A 114 614 54 HOH HOH . 
F 4 HOH A 115 615 144 HOH HOH . 
F 4 HOH A 116 616 154 HOH HOH . 
F 4 HOH A 117 617 77 HOH HOH . 
F 4 HOH A 118 618 24 HOH HOH . 
F 4 HOH A 119 619 93 HOH HOH . 
F 4 HOH A 120 620 62 HOH HOH . 
F 4 HOH A 121 621 136 HOH HOH . 
F 4 HOH A 122 622 110 HOH HOH . 
F 4 HOH A 123 623 6 HOH HOH . 
F 4 HOH A 124 624 40 HOH HOH . 
F 4 HOH A 125 625 10 HOH HOH . 
F 4 HOH A 126 626 46 HOH HOH . 
F 4 HOH A 127 627 161 HOH HOH . 
F 4 HOH A 128 628 159 HOH HOH . 
F 4 HOH A 129 629 27 HOH HOH . 
F 4 HOH A 130 630 31 HOH HOH . 
F 4 HOH A 131 631 116 HOH HOH . 
F 4 HOH A 132 632 47 HOH HOH . 
F 4 HOH A 133 633 131 HOH HOH . 
F 4 HOH A 134 634 70 HOH HOH . 
F 4 HOH A 135 635 104 HOH HOH . 
F 4 HOH A 136 636 28 HOH HOH . 
F 4 HOH A 137 637 143 HOH HOH . 
F 4 HOH A 138 638 2 HOH HOH . 
F 4 HOH A 139 639 151 HOH HOH . 
F 4 HOH A 140 640 163 HOH HOH . 
F 4 HOH A 141 641 152 HOH HOH . 
F 4 HOH A 142 642 149 HOH HOH . 
F 4 HOH A 143 643 79 HOH HOH . 
F 4 HOH A 144 644 122 HOH HOH . 
F 4 HOH A 145 645 1 HOH HOH . 
F 4 HOH A 146 646 5 HOH HOH . 
F 4 HOH A 147 647 14 HOH HOH . 
F 4 HOH A 148 648 86 HOH HOH . 
F 4 HOH A 149 649 137 HOH HOH . 
F 4 HOH A 150 650 118 HOH HOH . 
F 4 HOH A 151 651 133 HOH HOH . 
F 4 HOH A 152 652 123 HOH HOH . 
F 4 HOH A 153 653 117 HOH HOH . 
F 4 HOH A 154 654 158 HOH HOH . 
F 4 HOH A 155 655 124 HOH HOH . 
F 4 HOH A 156 656 132 HOH HOH . 
F 4 HOH A 157 657 126 HOH HOH . 
F 4 HOH A 158 658 127 HOH HOH . 
F 4 HOH A 159 659 76 HOH HOH . 
F 4 HOH A 160 660 92 HOH HOH . 
F 4 HOH A 161 661 142 HOH HOH . 
F 4 HOH A 162 662 155 HOH HOH . 
F 4 HOH A 163 663 140 HOH HOH . 
F 4 HOH A 164 664 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 -11.438 -33.47 17.815 1 62.69 ? C1 GOL 402 A 1 
HETATM 2 O O1 GOL . . . C 3 -11.08 -32.921 16.549 1 62.85 ? O1 GOL 402 A 1 
HETATM 3 C C2 GOL . . . C 3 -12.524 -34.511 17.597 1 61.72 ? C2 GOL 402 A 1 
HETATM 4 O O2 GOL . . . C 3 -12.294 -35.206 16.365 1 60.12 ? O2 GOL 402 A 1 
HETATM 5 C C3 GOL . . . C 3 -13.876 -33.824 17.535 1 60.25 ? C3 GOL 402 A 1 
HETATM 6 O O3 GOL . . . C 3 -14.889 -34.826 17.455 1 61.28 ? O3 GOL 402 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#