data_5IRS
#
_model_server_result.job_id            8YCHXqQUrnMSiUocTVFvig 
_model_server_result.datetime_utc      '2024-11-17 17:31:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5irs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    5IRS 
#
_exptl.entry_id    5IRS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.251 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2,3-DIHYDROXY-1,4-DITHIOBUTANE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5IRS 
_cell.length_a            42.555 
_cell.length_b            56.476 
_cell.length_c            64.089 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5IRS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             87 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              88 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            S1 
_struct_conn.ptnr2_label_comp_id            DTT 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             DTT 
_struct_conn.ptnr2_auth_seq_id              201 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        A 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.132 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C4 H10 O2 S2' 
_chem_comp.formula_weight    154.251 
_chem_comp.id                DTT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2,3-DIHYDROXY-1,4-DITHIOBUTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1,4-DITHIOTHREITOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 C1 DTT sing 83 n n 
S1 HS1 DTT sing 84 n n 
C1 C2 DTT sing 85 n n 
C1 H11 DTT sing 86 n n 
C1 H12 DTT sing 87 n n 
C2 O2 DTT sing 88 n n 
C2 C3 DTT sing 89 n n 
C2 H2 DTT sing 90 n n 
O2 HO2 DTT sing 91 n n 
C3 O3 DTT sing 92 n n 
C3 C4 DTT sing 93 n n 
C3 H3 DTT sing 94 n n 
O3 HO3 DTT sing 95 n n 
C4 S4 DTT sing 96 n n 
C4 H41 DTT sing 97 n n 
C4 H42 DTT sing 98 n n 
S4 HS2 DTT sing 99 n n 
#
_atom_sites.entry_id                     5IRS 
_atom_sites.fract_transf_matrix[1][1]    0.023499 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017707 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015603 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DTT A 1 201 1 DTT DTT . 
C 2 DTT A 1 202 2 DTT DTT . 
D 3 HOH A 1 301 54 HOH HOH . 
D 3 HOH A 2 302 51 HOH HOH . 
D 3 HOH A 3 303 10 HOH HOH . 
D 3 HOH A 4 304 23 HOH HOH . 
D 3 HOH A 5 305 36 HOH HOH . 
D 3 HOH A 6 306 30 HOH HOH . 
D 3 HOH A 7 307 69 HOH HOH . 
D 3 HOH A 8 308 8 HOH HOH . 
D 3 HOH A 9 309 68 HOH HOH . 
D 3 HOH A 10 310 18 HOH HOH . 
D 3 HOH A 11 311 42 HOH HOH . 
D 3 HOH A 12 312 44 HOH HOH . 
D 3 HOH A 13 313 34 HOH HOH . 
D 3 HOH A 14 314 14 HOH HOH . 
D 3 HOH A 15 315 21 HOH HOH . 
D 3 HOH A 16 316 12 HOH HOH . 
D 3 HOH A 17 317 2 HOH HOH . 
D 3 HOH A 18 318 11 HOH HOH . 
D 3 HOH A 19 319 16 HOH HOH . 
D 3 HOH A 20 320 33 HOH HOH . 
D 3 HOH A 21 321 17 HOH HOH . 
D 3 HOH A 22 322 39 HOH HOH . 
D 3 HOH A 23 323 1 HOH HOH . 
D 3 HOH A 24 324 5 HOH HOH . 
D 3 HOH A 25 325 28 HOH HOH . 
D 3 HOH A 26 326 19 HOH HOH . 
D 3 HOH A 27 327 63 HOH HOH . 
D 3 HOH A 28 328 61 HOH HOH . 
D 3 HOH A 29 329 31 HOH HOH . 
D 3 HOH A 30 330 6 HOH HOH . 
D 3 HOH A 31 331 3 HOH HOH . 
D 3 HOH A 32 332 7 HOH HOH . 
D 3 HOH A 33 333 38 HOH HOH . 
D 3 HOH A 34 334 56 HOH HOH . 
D 3 HOH A 35 335 46 HOH HOH . 
D 3 HOH A 36 336 20 HOH HOH . 
D 3 HOH A 37 337 65 HOH HOH . 
D 3 HOH A 38 338 22 HOH HOH . 
D 3 HOH A 39 339 35 HOH HOH . 
D 3 HOH A 40 340 53 HOH HOH . 
D 3 HOH A 41 341 15 HOH HOH . 
D 3 HOH A 42 342 67 HOH HOH . 
D 3 HOH A 43 343 4 HOH HOH . 
D 3 HOH A 44 344 13 HOH HOH . 
D 3 HOH A 45 345 24 HOH HOH . 
D 3 HOH A 46 346 9 HOH HOH . 
D 3 HOH A 47 347 43 HOH HOH . 
D 3 HOH A 48 348 32 HOH HOH . 
D 3 HOH A 49 349 57 HOH HOH . 
D 3 HOH A 50 350 41 HOH HOH . 
D 3 HOH A 51 351 29 HOH HOH . 
D 3 HOH A 52 352 50 HOH HOH . 
D 3 HOH A 53 353 25 HOH HOH . 
D 3 HOH A 54 354 58 HOH HOH . 
D 3 HOH A 55 355 62 HOH HOH . 
D 3 HOH A 56 356 45 HOH HOH . 
D 3 HOH A 57 357 47 HOH HOH . 
D 3 HOH A 58 358 40 HOH HOH . 
D 3 HOH A 59 359 64 HOH HOH . 
D 3 HOH A 60 360 27 HOH HOH . 
D 3 HOH A 61 361 49 HOH HOH . 
D 3 HOH A 62 362 55 HOH HOH . 
D 3 HOH A 63 363 37 HOH HOH . 
D 3 HOH A 64 364 48 HOH HOH . 
D 3 HOH A 65 365 52 HOH HOH . 
D 3 HOH A 66 366 66 HOH HOH . 
D 3 HOH A 67 367 26 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 DTT . . . B 2 19.174 27.423 12.893 1 82.8 ? S1 DTT 201 A 1 
HETATM 2 C C1 DTT . . . B 2 19.022 25.671 12.401 1 63.97 ? C1 DTT 201 A 1 
HETATM 3 C C2 DTT . . . B 2 17.835 25.199 11.552 1 66.02 ? C2 DTT 201 A 1 
HETATM 4 O O2 DTT . . . B 2 18.253 25.169 10.195 1 72.71 ? O2 DTT 201 A 1 
HETATM 5 C C3 DTT . . . B 2 16.513 25.943 11.842 1 62.19 ? C3 DTT 201 A 1 
HETATM 6 O O3 DTT . . . B 2 16.622 26.611 13.09 1 66.8 ? O3 DTT 201 A 1 
HETATM 7 C C4 DTT . . . B 2 16.011 26.916 10.762 1 48.91 ? C4 DTT 201 A 1 
HETATM 8 S S4 DTT . . . B 2 15.147 28.352 11.45 1 122.92 ? S4 DTT 201 A 1 
HETATM 9 H H11 DTT . . . B 2 19.932 25.405 11.863 1 76.77 ? H11 DTT 201 A 1 
HETATM 10 H H12 DTT . . . B 2 19.025 25.075 13.314 1 76.77 ? H12 DTT 201 A 1 
HETATM 11 H H2 DTT . . . B 2 17.656 24.165 11.847 1 79.23 ? H2 DTT 201 A 1 
HETATM 12 H HO2 DTT . . . B 2 17.601 25.648 9.642 1 87.26 ? HO2 DTT 201 A 1 
HETATM 13 H H3 DTT . . . B 2 15.745 25.176 11.944 1 74.63 ? H3 DTT 201 A 1 
HETATM 14 H HO3 DTT . . . B 2 16.351 27.547 12.985 1 80.16 ? HO3 DTT 201 A 1 
HETATM 15 H H41 DTT . . . B 2 16.859 27.26 10.172 1 58.7 ? H41 DTT 201 A 1 
HETATM 16 H H42 DTT . . . B 2 15.337 26.384 10.09 1 58.7 ? H42 DTT 201 A 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           16 
#