data_5IRZ
#
_model_server_result.job_id            vgC1j-W6Yay4cXsHrarBJw 
_model_server_result.datetime_utc      '2024-10-28 02:33:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5irz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Z","auth_seq_id":804}' 
#
_entry.id    5IRZ 
#
_exptl.entry_id    5IRZ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              411.428 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(hexanoyloxy)propyl hexanoate' 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5IRZ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5IRZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
? 4 P N N 
? 4 S N N 
? 4 T N N 
? 4 U N N 
? 4 V N N 
? 4 Y N N 
? 4 Z N N 
? 4 AA N N 
? 4 BA N N 
#
_chem_comp.formula           'C17 H34 N O8 P' 
_chem_comp.formula_weight    411.428 
_chem_comp.id                6OE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(hexanoyloxy)propyl hexanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 6OE sing 151 n n 
C17 C16 6OE sing 152 n n 
C16 C15 6OE sing 153 n n 
C26 C25 6OE sing 154 n n 
C15 C14 6OE sing 155 n n 
C24 C25 6OE sing 156 n n 
C24 C23 6OE sing 157 n n 
C22 C23 6OE sing 158 n n 
C22 C21 6OE sing 159 n n 
C14 C13 6OE sing 160 n n 
O19 C13 6OE doub 161 n n 
O27 C21 6OE doub 162 n n 
C13 O12 6OE sing 163 n n 
C21 O20 6OE sing 164 n n 
C11 O12 6OE sing 165 n n 
C11 C10 6OE sing 166 n n 
O20 C10 6OE sing 167 n n 
C10 C09 6OE sing 168 n n 
C09 O08 6OE sing 169 n n 
O08 P05 6OE sing 170 n n 
O04 P05 6OE sing 171 n n 
O04 C03 6OE sing 172 n n 
P05 O07 6OE doub 173 n n 
P05 O06 6OE sing 174 n n 
C02 C03 6OE sing 175 n n 
C02 N01 6OE sing 176 n n 
N01 H011 6OE sing 177 n n 
N01 H012 6OE sing 178 n n 
C02 H022 6OE sing 179 n n 
C02 H021 6OE sing 180 n n 
C03 H032 6OE sing 181 n n 
C03 H031 6OE sing 182 n n 
O06 H2 6OE sing 183 n n 
C09 H092 6OE sing 184 n n 
C09 H091 6OE sing 185 n n 
C10 H101 6OE sing 186 n n 
C11 H112 6OE sing 187 n n 
C11 H111 6OE sing 188 n n 
C14 H142 6OE sing 189 n n 
C14 H141 6OE sing 190 n n 
C15 H151 6OE sing 191 n n 
C15 H152 6OE sing 192 n n 
C16 H161 6OE sing 193 n n 
C16 H162 6OE sing 194 n n 
C17 H172 6OE sing 195 n n 
C17 H171 6OE sing 196 n n 
C18 H181 6OE sing 197 n n 
C18 H182 6OE sing 198 n n 
C18 H3 6OE sing 199 n n 
C22 H222 6OE sing 200 n n 
C22 H221 6OE sing 201 n n 
C23 H231 6OE sing 202 n n 
C23 H232 6OE sing 203 n n 
C24 H242 6OE sing 204 n n 
C24 H241 6OE sing 205 n n 
C25 H252 6OE sing 206 n n 
C25 H251 6OE sing 207 n n 
C26 H262 6OE sing 208 n n 
C26 H261 6OE sing 209 n n 
C26 H4 6OE sing 210 n n 
#
_atom_sites.entry_id                     5IRZ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 6O8 D 1 801 2 6O8 LPA . 
F 3 6ES D 1 802 21 6ES LPC . 
G 4 6OE D 1 803 25 6OE LPB . 
H 4 6OE D 1 804 30 6OE LPB . 
I 4 6OE D 1 805 39 6OE LPB . 
J 4 6OE D 1 806 40 6OE LPB . 
K 2 6O8 E 1 801 20 6O8 LPA . 
L 3 6ES E 1 802 24 6ES LPC . 
M 4 6OE E 1 803 26 6OE LPB . 
N 4 6OE E 1 804 35 6OE LPB . 
O 4 6OE E 1 805 36 6OE LPB . 
P 4 6OE E 1 806 37 6OE LPB . 
Q 2 6O8 B 1 801 8 6O8 LPA . 
R 3 6ES B 1 802 22 6ES LPC . 
S 4 6OE B 1 803 27 6OE LPB . 
T 4 6OE B 1 804 28 6OE LPB . 
U 4 6OE B 1 805 29 6OE LPB . 
V 4 6OE B 1 806 34 6OE LPB . 
W 2 6O8 C 1 801 14 6O8 LPA . 
X 3 6ES C 1 802 23 6ES LPC . 
Y 4 6OE C 1 803 31 6OE LPB . 
Z 4 6OE C 1 804 32 6OE LPB . 
AA 4 6OE C 1 805 33 6OE LPB . 
BA 4 6OE C 1 806 38 6OE LPB . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N01 6OE . . . Z 4 120.287 84.956 74.835 1 20 ? N01 6OE 804 C 1 
HETATM 2 C C02 6OE . . . Z 4 121.511 85.687 75.099 1 20 ? C02 6OE 804 C 1 
HETATM 3 C C03 6OE . . . Z 4 122.578 85.343 74.071 1 20 ? C03 6OE 804 C 1 
HETATM 4 O O04 6OE . . . Z 4 123.489 84.474 74.671 1 20 ? O04 6OE 804 C 1 
HETATM 5 P P05 6OE . . . Z 4 124.967 85.032 75.138 1 20 ? P05 6OE 804 C 1 
HETATM 6 O O06 6OE . . . Z 4 125.935 84.989 73.981 1 20 ? O06 6OE 804 C 1 
HETATM 7 O O07 6OE . . . Z 4 124.842 86.45 75.632 1 20 ? O07 6OE 804 C 1 
HETATM 8 O O08 6OE . . . Z 4 125.512 84.066 76.351 1 20 ? O08 6OE 804 C 1 
HETATM 9 C C09 6OE . . . Z 4 124.532 83.482 77.15 1 20 ? C09 6OE 804 C 1 
HETATM 10 C C10 6OE . . . Z 4 125.012 82.126 77.624 1 20 ? C10 6OE 804 C 1 
HETATM 11 C C11 6OE . . . Z 4 123.952 81.078 77.326 1 20 ? C11 6OE 804 C 1 
HETATM 12 O O12 6OE . . . Z 4 122.714 81.566 77.738 1 20 ? O12 6OE 804 C 1 
HETATM 13 C C13 6OE . . . Z 4 122.071 80.71 78.63 1 20 ? C13 6OE 804 C 1 
HETATM 14 C C14 6OE . . . Z 4 122.041 81.062 80.11 1 20 ? C14 6OE 804 C 1 
HETATM 15 C C15 6OE . . . Z 4 121.595 79.908 80.992 1 20 ? C15 6OE 804 C 1 
HETATM 16 C C16 6OE . . . Z 4 121.839 80.186 82.468 1 20 ? C16 6OE 804 C 1 
HETATM 17 C C17 6OE . . . Z 4 120.952 79.351 83.386 1 20 ? C17 6OE 804 C 1 
HETATM 18 C C18 6OE . . . Z 4 121.393 79.331 84.85 1 20 ? C18 6OE 804 C 1 
HETATM 19 O O19 6OE . . . Z 4 121.553 79.725 78.238 1 20 ? O19 6OE 804 C 1 
HETATM 20 O O20 6OE . . . Z 4 125.22 82.177 79.008 1 20 ? O20 6OE 804 C 1 
HETATM 21 C C21 6OE . . . Z 4 126.271 83.007 79.413 1 20 ? C21 6OE 804 C 1 
HETATM 22 C C22 6OE . . . Z 4 126.346 83.53 80.844 1 20 ? C22 6OE 804 C 1 
HETATM 23 C C23 6OE . . . Z 4 125.809 82.572 81.903 1 20 ? C23 6OE 804 C 1 
HETATM 24 C C24 6OE . . . Z 4 125.756 83.214 83.289 1 20 ? C24 6OE 804 C 1 
HETATM 25 C C25 6OE . . . Z 4 125.228 82.287 84.378 1 20 ? C25 6OE 804 C 1 
HETATM 26 C C26 6OE . . . Z 4 125.376 82.876 85.777 1 20 ? C26 6OE 804 C 1 
HETATM 27 O O27 6OE . . . Z 4 127.112 83.317 78.639 1 20 ? O27 6OE 804 C 1 
HETATM 28 H H011 6OE . . . Z 4 119.686 85.504 74.481 1 20 ? H011 6OE 804 C 1 
HETATM 29 H H012 6OE . . . Z 4 120.456 84.292 74.27 1 20 ? H012 6OE 804 C 1 
HETATM 30 H H022 6OE . . . Z 4 121.839 85.448 75.976 1 20 ? H022 6OE 804 C 1 
HETATM 31 H H021 6OE . . . Z 4 121.331 86.639 75.07 1 20 ? H021 6OE 804 C 1 
HETATM 32 H H032 6OE . . . Z 4 122.171 84.911 73.308 1 20 ? H032 6OE 804 C 1 
HETATM 33 H H031 6OE . . . Z 4 123.03 86.152 73.796 1 20 ? H031 6OE 804 C 1 
HETATM 34 H H092 6OE . . . Z 4 124.348 84.047 77.911 1 20 ? H092 6OE 804 C 1 
HETATM 35 H H091 6OE . . . Z 4 123.725 83.358 76.632 1 20 ? H091 6OE 804 C 1 
HETATM 36 H H101 6OE . . . Z 4 125.834 81.898 77.168 1 20 ? H101 6OE 804 C 1 
HETATM 37 H H112 6OE . . . Z 4 124.152 80.262 77.804 1 20 ? H112 6OE 804 C 1 
HETATM 38 H H111 6OE . . . Z 4 123.928 80.916 76.373 1 20 ? H111 6OE 804 C 1 
HETATM 39 H H142 6OE . . . Z 4 122.931 81.322 80.382 1 20 ? H142 6OE 804 C 1 
HETATM 40 H H141 6OE . . . Z 4 121.44 81.806 80.24 1 20 ? H141 6OE 804 C 1 
HETATM 41 H H151 6OE . . . Z 4 122.086 79.121 80.735 1 20 ? H151 6OE 804 C 1 
HETATM 42 H H152 6OE . . . Z 4 120.654 79.752 80.855 1 20 ? H152 6OE 804 C 1 
HETATM 43 H H161 6OE . . . Z 4 121.659 81.118 82.627 1 20 ? H161 6OE 804 C 1 
HETATM 44 H H162 6OE . . . Z 4 122.768 80.014 82.667 1 20 ? H162 6OE 804 C 1 
HETATM 45 H H172 6OE . . . Z 4 120.056 79.71 83.347 1 20 ? H172 6OE 804 C 1 
HETATM 46 H H171 6OE . . . Z 4 120.937 78.446 83.05 1 20 ? H171 6OE 804 C 1 
HETATM 47 H H181 6OE . . . Z 4 121.532 80.234 85.155 1 20 ? H181 6OE 804 C 1 
HETATM 48 H H182 6OE . . . Z 4 122.215 78.836 84.943 1 20 ? H182 6OE 804 C 1 
HETATM 49 H H222 6OE . . . Z 4 127.27 83.724 81.044 1 20 ? H222 6OE 804 C 1 
HETATM 50 H H221 6OE . . . Z 4 125.842 84.352 80.895 1 20 ? H221 6OE 804 C 1 
HETATM 51 H H231 6OE . . . Z 4 126.384 81.796 81.938 1 20 ? H231 6OE 804 C 1 
HETATM 52 H H232 6OE . . . Z 4 124.918 82.293 81.653 1 20 ? H232 6OE 804 C 1 
HETATM 53 H H242 6OE . . . Z 4 126.643 83.505 83.537 1 20 ? H242 6OE 804 C 1 
HETATM 54 H H241 6OE . . . Z 4 125.18 83.986 83.247 1 20 ? H241 6OE 804 C 1 
HETATM 55 H H252 6OE . . . Z 4 124.294 82.117 84.212 1 20 ? H252 6OE 804 C 1 
HETATM 56 H H251 6OE . . . Z 4 125.706 81.449 84.338 1 20 ? H251 6OE 804 C 1 
HETATM 57 H H262 6OE . . . Z 4 125.062 83.789 85.778 1 20 ? H262 6OE 804 C 1 
HETATM 58 H H261 6OE . . . Z 4 126.303 82.864 86.041 1 20 ? H261 6OE 804 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           58 
#