data_5ISD
#
_model_server_result.job_id            yIfP6OZVafd0YULS1e1c-g 
_model_server_result.datetime_utc      '2024-11-13 19:15:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5isd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":501}' 
#
_entry.id    5ISD 
#
_exptl.entry_id    5ISD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5ISD 
_cell.length_a            74.555 
_cell.length_b            98.446 
_cell.length_c            205.792 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ISD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 L N N 
? 2 M N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 T N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 146 n n 
C1 C2 EDO sing 147 n n 
C1 H11 EDO sing 148 n n 
C1 H12 EDO sing 149 n n 
O1 HO1 EDO sing 150 n n 
C2 O2 EDO sing 151 n n 
C2 H21 EDO sing 152 n n 
C2 H22 EDO sing 153 n n 
O2 HO2 EDO sing 154 n n 
#
_atom_sites.entry_id                     5ISD 
_atom_sites.fract_transf_matrix[1][1]    0.013413 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010158 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004859 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 EDO A 1 501 2 EDO EDO . 
F 2 EDO A 1 502 7 EDO EDO . 
G 2 EDO A 1 503 8 EDO EDO . 
H 3 PEG A 1 504 10 PEG PEG . 
I 3 PEG A 1 505 11 PEG PEG . 
J 4 M2M A 1 506 13 M2M M2M . 
K 5 SAO A 1 507 1 SAO SAH . 
L 2 EDO B 1 501 1 EDO EDO . 
M 2 EDO B 1 502 6 EDO EDO . 
N 3 PEG B 1 503 12 PEG PEG . 
O 6 6CZ B 1 504 2 6CZ 592 . 
P 2 EDO C 1 501 3 EDO EDO . 
Q 2 EDO C 1 502 4 EDO EDO . 
R 2 EDO C 1 503 9 EDO EDO . 
S 5 SAO C 1 504 3 SAO SAH . 
T 2 EDO D 1 501 5 EDO EDO . 
U 5 SAO D 1 502 4 SAO SAH . 
V 7 HOH A 1 601 49 HOH HOH . 
V 7 HOH A 2 602 114 HOH HOH . 
V 7 HOH A 3 603 137 HOH HOH . 
V 7 HOH A 4 604 134 HOH HOH . 
V 7 HOH A 5 605 95 HOH HOH . 
V 7 HOH A 6 606 35 HOH HOH . 
V 7 HOH A 7 607 85 HOH HOH . 
V 7 HOH A 8 608 43 HOH HOH . 
V 7 HOH A 9 609 32 HOH HOH . 
V 7 HOH A 10 610 107 HOH HOH . 
V 7 HOH A 11 611 19 HOH HOH . 
V 7 HOH A 12 612 122 HOH HOH . 
V 7 HOH A 13 613 84 HOH HOH . 
V 7 HOH A 14 614 68 HOH HOH . 
V 7 HOH A 15 615 108 HOH HOH . 
V 7 HOH A 16 616 36 HOH HOH . 
V 7 HOH A 17 617 152 HOH HOH . 
V 7 HOH A 18 618 155 HOH HOH . 
V 7 HOH A 19 619 39 HOH HOH . 
V 7 HOH A 20 620 90 HOH HOH . 
V 7 HOH A 21 621 88 HOH HOH . 
V 7 HOH A 22 622 29 HOH HOH . 
V 7 HOH A 23 623 3 HOH HOH . 
V 7 HOH A 24 624 100 HOH HOH . 
V 7 HOH A 25 625 156 HOH HOH . 
V 7 HOH A 26 626 7 HOH HOH . 
V 7 HOH A 27 627 106 HOH HOH . 
V 7 HOH A 28 628 14 HOH HOH . 
V 7 HOH A 29 629 159 HOH HOH . 
V 7 HOH A 30 630 104 HOH HOH . 
V 7 HOH A 31 631 89 HOH HOH . 
V 7 HOH A 32 632 6 HOH HOH . 
V 7 HOH A 33 633 79 HOH HOH . 
V 7 HOH A 34 634 138 HOH HOH . 
V 7 HOH A 35 635 18 HOH HOH . 
V 7 HOH A 36 636 13 HOH HOH . 
V 7 HOH A 37 637 31 HOH HOH . 
V 7 HOH A 38 638 117 HOH HOH . 
V 7 HOH A 39 639 135 HOH HOH . 
V 7 HOH A 40 640 64 HOH HOH . 
V 7 HOH A 41 641 34 HOH HOH . 
V 7 HOH A 42 642 8 HOH HOH . 
V 7 HOH A 43 643 93 HOH HOH . 
V 7 HOH A 44 644 154 HOH HOH . 
V 7 HOH A 45 645 119 HOH HOH . 
V 7 HOH A 46 646 97 HOH HOH . 
V 7 HOH A 47 647 128 HOH HOH . 
V 7 HOH A 48 648 11 HOH HOH . 
V 7 HOH A 49 649 63 HOH HOH . 
V 7 HOH A 50 650 25 HOH HOH . 
V 7 HOH A 51 651 111 HOH HOH . 
V 7 HOH A 52 652 162 HOH HOH . 
V 7 HOH A 53 653 121 HOH HOH . 
V 7 HOH A 54 654 42 HOH HOH . 
V 7 HOH A 55 655 21 HOH HOH . 
V 7 HOH A 56 656 115 HOH HOH . 
V 7 HOH A 57 657 58 HOH HOH . 
V 7 HOH A 58 658 99 HOH HOH . 
V 7 HOH A 59 659 70 HOH HOH . 
V 7 HOH A 60 660 59 HOH HOH . 
W 7 HOH B 1 601 113 HOH HOH . 
W 7 HOH B 2 602 54 HOH HOH . 
W 7 HOH B 3 603 78 HOH HOH . 
W 7 HOH B 4 604 105 HOH HOH . 
W 7 HOH B 5 605 160 HOH HOH . 
W 7 HOH B 6 606 164 HOH HOH . 
W 7 HOH B 7 607 55 HOH HOH . 
W 7 HOH B 8 608 87 HOH HOH . 
W 7 HOH B 9 609 41 HOH HOH . 
W 7 HOH B 10 610 15 HOH HOH . 
W 7 HOH B 11 611 125 HOH HOH . 
W 7 HOH B 12 612 44 HOH HOH . 
W 7 HOH B 13 613 82 HOH HOH . 
W 7 HOH B 14 614 5 HOH HOH . 
W 7 HOH B 15 615 109 HOH HOH . 
W 7 HOH B 16 616 132 HOH HOH . 
W 7 HOH B 17 617 48 HOH HOH . 
W 7 HOH B 18 618 16 HOH HOH . 
W 7 HOH B 19 619 46 HOH HOH . 
W 7 HOH B 20 620 163 HOH HOH . 
W 7 HOH B 21 621 149 HOH HOH . 
W 7 HOH B 22 622 116 HOH HOH . 
W 7 HOH B 23 623 94 HOH HOH . 
W 7 HOH B 24 624 98 HOH HOH . 
W 7 HOH B 25 625 133 HOH HOH . 
W 7 HOH B 26 626 118 HOH HOH . 
W 7 HOH B 27 627 23 HOH HOH . 
W 7 HOH B 28 628 145 HOH HOH . 
W 7 HOH B 29 629 67 HOH HOH . 
W 7 HOH B 30 630 56 HOH HOH . 
X 7 HOH C 1 601 131 HOH HOH . 
X 7 HOH C 2 602 50 HOH HOH . 
X 7 HOH C 3 603 126 HOH HOH . 
X 7 HOH C 4 604 127 HOH HOH . 
X 7 HOH C 5 605 158 HOH HOH . 
X 7 HOH C 6 606 65 HOH HOH . 
X 7 HOH C 7 607 53 HOH HOH . 
X 7 HOH C 8 608 76 HOH HOH . 
X 7 HOH C 9 609 157 HOH HOH . 
X 7 HOH C 10 610 146 HOH HOH . 
X 7 HOH C 11 611 96 HOH HOH . 
X 7 HOH C 12 612 71 HOH HOH . 
X 7 HOH C 13 613 52 HOH HOH . 
X 7 HOH C 14 614 81 HOH HOH . 
X 7 HOH C 15 615 124 HOH HOH . 
X 7 HOH C 16 616 37 HOH HOH . 
X 7 HOH C 17 617 165 HOH HOH . 
X 7 HOH C 18 618 136 HOH HOH . 
X 7 HOH C 19 619 110 HOH HOH . 
X 7 HOH C 20 620 150 HOH HOH . 
X 7 HOH C 21 621 45 HOH HOH . 
X 7 HOH C 22 622 148 HOH HOH . 
X 7 HOH C 23 623 57 HOH HOH . 
X 7 HOH C 24 624 38 HOH HOH . 
X 7 HOH C 25 625 20 HOH HOH . 
X 7 HOH C 26 626 120 HOH HOH . 
X 7 HOH C 27 627 9 HOH HOH . 
X 7 HOH C 28 628 61 HOH HOH . 
X 7 HOH C 29 629 139 HOH HOH . 
X 7 HOH C 30 630 74 HOH HOH . 
X 7 HOH C 31 631 80 HOH HOH . 
X 7 HOH C 32 632 26 HOH HOH . 
X 7 HOH C 33 633 147 HOH HOH . 
X 7 HOH C 34 634 17 HOH HOH . 
X 7 HOH C 35 635 130 HOH HOH . 
X 7 HOH C 36 636 92 HOH HOH . 
X 7 HOH C 37 637 28 HOH HOH . 
X 7 HOH C 38 638 91 HOH HOH . 
X 7 HOH C 39 639 27 HOH HOH . 
X 7 HOH C 40 640 60 HOH HOH . 
X 7 HOH C 41 641 30 HOH HOH . 
X 7 HOH C 42 642 10 HOH HOH . 
X 7 HOH C 43 643 129 HOH HOH . 
Y 7 HOH D 1 601 86 HOH HOH . 
Y 7 HOH D 2 602 12 HOH HOH . 
Y 7 HOH D 3 603 123 HOH HOH . 
Y 7 HOH D 4 604 73 HOH HOH . 
Y 7 HOH D 5 605 153 HOH HOH . 
Y 7 HOH D 6 606 51 HOH HOH . 
Y 7 HOH D 7 607 2 HOH HOH . 
Y 7 HOH D 8 608 102 HOH HOH . 
Y 7 HOH D 9 609 1 HOH HOH . 
Y 7 HOH D 10 610 72 HOH HOH . 
Y 7 HOH D 11 611 4 HOH HOH . 
Y 7 HOH D 12 612 66 HOH HOH . 
Y 7 HOH D 13 613 112 HOH HOH . 
Y 7 HOH D 14 614 40 HOH HOH . 
Y 7 HOH D 15 615 142 HOH HOH . 
Y 7 HOH D 16 616 83 HOH HOH . 
Y 7 HOH D 17 617 140 HOH HOH . 
Y 7 HOH D 18 618 33 HOH HOH . 
Y 7 HOH D 19 619 143 HOH HOH . 
Y 7 HOH D 20 620 141 HOH HOH . 
Y 7 HOH D 21 621 69 HOH HOH . 
Y 7 HOH D 22 622 22 HOH HOH . 
Y 7 HOH D 23 623 24 HOH HOH . 
Y 7 HOH D 24 624 47 HOH HOH . 
Y 7 HOH D 25 625 103 HOH HOH . 
Y 7 HOH D 26 626 144 HOH HOH . 
Y 7 HOH D 27 627 101 HOH HOH . 
Y 7 HOH D 28 628 77 HOH HOH . 
Y 7 HOH D 29 629 75 HOH HOH . 
Y 7 HOH D 30 630 161 HOH HOH . 
Y 7 HOH D 31 631 151 HOH HOH . 
Y 7 HOH D 32 632 62 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . L 2 10.391 12.655 134.077 1 142.99 ? C1 EDO 501 B 1 
HETATM 2 O O1 EDO . . . L 2 10.819 11.37 133.722 1 143 ? O1 EDO 501 B 1 
HETATM 3 C C2 EDO . . . L 2 8.872 12.688 133.95 1 142.75 ? C2 EDO 501 B 1 
HETATM 4 O O2 EDO . . . L 2 8.45 11.4 133.597 1 142.59 ? O2 EDO 501 B 1 
HETATM 5 H H11 EDO . . . L 2 10.786 13.31 133.48 1 171.59 ? H11 EDO 501 B 1 
HETATM 6 H H12 EDO . . . L 2 10.649 12.847 134.992 1 171.59 ? H12 EDO 501 B 1 
HETATM 7 H HO1 EDO . . . L 2 11.433 11.119 134.253 1 171.6 ? HO1 EDO 501 B 1 
HETATM 8 H H21 EDO . . . L 2 8.475 12.943 134.798 1 171.3 ? H21 EDO 501 B 1 
HETATM 9 H H22 EDO . . . L 2 8.612 13.32 133.261 1 171.3 ? H22 EDO 501 B 1 
HETATM 10 H HO2 EDO . . . L 2 7.653 11.279 133.866 1 171.11 ? HO2 EDO 501 B 1 
#
_model_server_stats.io_time_ms              30 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    57 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#