data_5ISQ # _model_server_result.job_id IyFJVdDl7L3Kj7EUCBDqGA _model_server_result.datetime_utc '2024-11-28 07:19:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5isq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 5ISQ # _exptl.entry_id 5ISQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ISQ _cell.length_a 78.985 _cell.length_b 78.985 _cell.length_c 108.686 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ISQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 5ISQ _atom_sites.fract_transf_matrix[1][1] 0.012661 _atom_sites.fract_transf_matrix[1][2] 0.00731 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014619 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009201 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP X 1 201 207 NAP NAP . C 3 U06 X 1 202 1 U06 DRG . D 4 GOL X 1 203 221 GOL GOL . E 5 HOH X 1 301 50 HOH HOH . E 5 HOH X 2 302 71 HOH HOH . E 5 HOH X 3 303 79 HOH HOH . E 5 HOH X 4 304 89 HOH HOH . E 5 HOH X 5 305 110 HOH HOH . E 5 HOH X 6 306 80 HOH HOH . E 5 HOH X 7 307 112 HOH HOH . E 5 HOH X 8 308 114 HOH HOH . E 5 HOH X 9 309 34 HOH HOH . E 5 HOH X 10 310 61 HOH HOH . E 5 HOH X 11 311 35 HOH HOH . E 5 HOH X 12 312 105 HOH HOH . E 5 HOH X 13 313 92 HOH HOH . E 5 HOH X 14 314 56 HOH HOH . E 5 HOH X 15 315 108 HOH HOH . E 5 HOH X 16 316 45 HOH HOH . E 5 HOH X 17 317 72 HOH HOH . E 5 HOH X 18 318 41 HOH HOH . E 5 HOH X 19 319 57 HOH HOH . E 5 HOH X 20 320 95 HOH HOH . E 5 HOH X 21 321 94 HOH HOH . E 5 HOH X 22 322 81 HOH HOH . E 5 HOH X 23 323 60 HOH HOH . E 5 HOH X 24 324 84 HOH HOH . E 5 HOH X 25 325 29 HOH HOH . E 5 HOH X 26 326 97 HOH HOH . E 5 HOH X 27 327 22 HOH HOH . E 5 HOH X 28 328 33 HOH HOH . E 5 HOH X 29 329 3 HOH HOH . E 5 HOH X 30 330 47 HOH HOH . E 5 HOH X 31 331 69 HOH HOH . E 5 HOH X 32 332 75 HOH HOH . E 5 HOH X 33 333 16 HOH HOH . E 5 HOH X 34 334 6 HOH HOH . E 5 HOH X 35 335 14 HOH HOH . E 5 HOH X 36 336 30 HOH HOH . E 5 HOH X 37 337 23 HOH HOH . E 5 HOH X 38 338 106 HOH HOH . E 5 HOH X 39 339 58 HOH HOH . E 5 HOH X 40 340 46 HOH HOH . E 5 HOH X 41 341 40 HOH HOH . E 5 HOH X 42 342 88 HOH HOH . E 5 HOH X 43 343 21 HOH HOH . E 5 HOH X 44 344 36 HOH HOH . E 5 HOH X 45 345 38 HOH HOH . E 5 HOH X 46 346 52 HOH HOH . E 5 HOH X 47 347 85 HOH HOH . E 5 HOH X 48 348 44 HOH HOH . E 5 HOH X 49 349 70 HOH HOH . E 5 HOH X 50 350 51 HOH HOH . E 5 HOH X 51 351 15 HOH HOH . E 5 HOH X 52 352 59 HOH HOH . E 5 HOH X 53 353 68 HOH HOH . E 5 HOH X 54 354 4 HOH HOH . E 5 HOH X 55 355 63 HOH HOH . E 5 HOH X 56 356 9 HOH HOH . E 5 HOH X 57 357 7 HOH HOH . E 5 HOH X 58 358 24 HOH HOH . E 5 HOH X 59 359 8 HOH HOH . E 5 HOH X 60 360 5 HOH HOH . E 5 HOH X 61 361 67 HOH HOH . E 5 HOH X 62 362 20 HOH HOH . E 5 HOH X 63 363 27 HOH HOH . E 5 HOH X 64 364 25 HOH HOH . E 5 HOH X 65 365 37 HOH HOH . E 5 HOH X 66 366 73 HOH HOH . E 5 HOH X 67 367 109 HOH HOH . E 5 HOH X 68 368 2 HOH HOH . E 5 HOH X 69 369 43 HOH HOH . E 5 HOH X 70 370 12 HOH HOH . E 5 HOH X 71 371 107 HOH HOH . E 5 HOH X 72 372 18 HOH HOH . E 5 HOH X 73 373 42 HOH HOH . E 5 HOH X 74 374 39 HOH HOH . E 5 HOH X 75 375 102 HOH HOH . E 5 HOH X 76 376 17 HOH HOH . E 5 HOH X 77 377 87 HOH HOH . E 5 HOH X 78 378 13 HOH HOH . E 5 HOH X 79 379 31 HOH HOH . E 5 HOH X 80 380 66 HOH HOH . E 5 HOH X 81 381 10 HOH HOH . E 5 HOH X 82 382 86 HOH HOH . E 5 HOH X 83 383 91 HOH HOH . E 5 HOH X 84 384 26 HOH HOH . E 5 HOH X 85 385 55 HOH HOH . E 5 HOH X 86 386 93 HOH HOH . E 5 HOH X 87 387 62 HOH HOH . E 5 HOH X 88 388 76 HOH HOH . E 5 HOH X 89 389 32 HOH HOH . E 5 HOH X 90 390 111 HOH HOH . E 5 HOH X 91 391 78 HOH HOH . E 5 HOH X 92 392 65 HOH HOH . E 5 HOH X 93 393 113 HOH HOH . E 5 HOH X 94 394 77 HOH HOH . E 5 HOH X 95 395 48 HOH HOH . E 5 HOH X 96 396 49 HOH HOH . E 5 HOH X 97 397 53 HOH HOH . E 5 HOH X 98 398 100 HOH HOH . E 5 HOH X 99 399 90 HOH HOH . E 5 HOH X 100 400 28 HOH HOH . E 5 HOH X 101 401 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 51.676 73.762 98.346 1 32.59 ? C1 GOL 203 X 1 HETATM 2 O O1 GOL . . . D 4 51.039 72.762 97.578 1 40.26 ? O1 GOL 203 X 1 HETATM 3 C C2 GOL . . . D 4 50.657 74.357 99.305 1 43.12 ? C2 GOL 203 X 1 HETATM 4 O O2 GOL . . . D 4 50.215 75.62 98.836 1 31.28 ? O2 GOL 203 X 1 HETATM 5 C C3 GOL . . . D 4 51.295 74.426 100.692 1 33.37 ? C3 GOL 203 X 1 HETATM 6 O O3 GOL . . . D 4 50.631 75.391 101.485 1 48.82 ? O3 GOL 203 X 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 6 #