data_5IST # _model_server_result.job_id zsPkVcScKVEkzCE21F4fFg _model_server_result.datetime_utc '2024-11-24 10:45:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ist # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5IST # _exptl.entry_id 5IST _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 402.446 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-[3-[3-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]prop-2-ynyl]-4-methoxy-phenyl]benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5IST _cell.length_a 79.067 _cell.length_b 79.067 _cell.length_c 108.419 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IST _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H22 N4 O3' _chem_comp.formula_weight 402.446 _chem_comp.id U06 _chem_comp.mon_nstd_flag . _chem_comp.name '4-[3-[3-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]prop-2-ynyl]-4-methoxy-phenyl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-4'-methoxy-[1,1'-biphenyl]-4-carboxylic acid;UCP1106" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OBD CBB U06 doub 425 n n NAI C4 U06 sing 426 n n N3 C4 U06 doub 427 n y N3 C2 U06 sing 428 n y CBB OBC U06 sing 429 n n CBB CAY U06 sing 430 n n NAF C2 U06 sing 431 n n C4 C5 U06 sing 432 n y CAZ CAY U06 doub 433 n y CAZ CBA U06 sing 434 n y C2 N1 U06 doub 435 n y CAY CAX U06 sing 436 n y CBA CAV U06 doub 437 n y C5 CAK U06 sing 438 n n C5 C6 U06 doub 439 n y N1 C6 U06 sing 440 n y CAK CAL U06 trip 441 n n C6 CAB U06 sing 442 n n CAX CAW U06 doub 443 n y CAA CAB U06 sing 444 n n CAV CAW U06 sing 445 n y CAV CAT U06 sing 446 n n CAL CAM U06 sing 447 n n CAU CAT U06 doub 448 n y CAU CAN U06 sing 449 n y CAM CAN U06 sing 450 n n CAT CAS U06 sing 451 n y CAN CAO U06 doub 452 n y CAS CAR U06 doub 453 n y CAO CAR U06 sing 454 n y CAO OAP U06 sing 455 n n OAP CAQ U06 sing 456 n n CAA H1 U06 sing 457 n n CAA H2 U06 sing 458 n n CAA H3 U06 sing 459 n n CAB H4 U06 sing 460 n n CAB H5 U06 sing 461 n n NAF H6 U06 sing 462 n n NAF H7 U06 sing 463 n n NAI H8 U06 sing 464 n n NAI H9 U06 sing 465 n n CAM H10 U06 sing 466 n n CAM H11 U06 sing 467 n n CAU H12 U06 sing 468 n n CAQ H13 U06 sing 469 n n CAQ H14 U06 sing 470 n n CAQ H15 U06 sing 471 n n CAR H16 U06 sing 472 n n CAS H17 U06 sing 473 n n CAW H18 U06 sing 474 n n CAX H19 U06 sing 475 n n OBC H20 U06 sing 476 n n CAZ H21 U06 sing 477 n n CBA H22 U06 sing 478 n n # _atom_sites.entry_id 5IST _atom_sites.fract_transf_matrix[1][1] 0.012648 _atom_sites.fract_transf_matrix[1][2] 0.007302 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009223 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 U06 X 1 201 1 U06 DRG . C 3 XNP X 1 202 1 XNP ANH . D 4 NAP X 1 203 207 NAP NAP . E 5 HOH X 1 301 16 HOH HOH . E 5 HOH X 2 302 52 HOH HOH . E 5 HOH X 3 303 24 HOH HOH . E 5 HOH X 4 304 113 HOH HOH . E 5 HOH X 5 305 62 HOH HOH . E 5 HOH X 6 306 68 HOH HOH . E 5 HOH X 7 307 75 HOH HOH . E 5 HOH X 8 308 106 HOH HOH . E 5 HOH X 9 309 69 HOH HOH . E 5 HOH X 10 310 29 HOH HOH . E 5 HOH X 11 311 95 HOH HOH . E 5 HOH X 12 312 94 HOH HOH . E 5 HOH X 13 313 60 HOH HOH . E 5 HOH X 14 314 14 HOH HOH . E 5 HOH X 15 315 63 HOH HOH . E 5 HOH X 16 316 36 HOH HOH . E 5 HOH X 17 317 115 HOH HOH . E 5 HOH X 18 318 57 HOH HOH . E 5 HOH X 19 319 8 HOH HOH . E 5 HOH X 20 320 41 HOH HOH . E 5 HOH X 21 321 20 HOH HOH . E 5 HOH X 22 322 53 HOH HOH . E 5 HOH X 23 323 37 HOH HOH . E 5 HOH X 24 324 104 HOH HOH . E 5 HOH X 25 325 59 HOH HOH . E 5 HOH X 26 326 61 HOH HOH . E 5 HOH X 27 327 68 HOH HOH . E 5 HOH X 28 328 3 HOH HOH . E 5 HOH X 29 329 33 HOH HOH . E 5 HOH X 30 330 110 HOH HOH . E 5 HOH X 31 331 77 HOH HOH . E 5 HOH X 32 332 11 HOH HOH . E 5 HOH X 33 333 31 HOH HOH . E 5 HOH X 34 334 15 HOH HOH . E 5 HOH X 35 335 116 HOH HOH . E 5 HOH X 36 336 56 HOH HOH . E 5 HOH X 37 337 78 HOH HOH . E 5 HOH X 38 338 65 HOH HOH . E 5 HOH X 39 339 23 HOH HOH . E 5 HOH X 40 340 46 HOH HOH . E 5 HOH X 41 341 90 HOH HOH . E 5 HOH X 42 342 117 HOH HOH . E 5 HOH X 43 343 5 HOH HOH . E 5 HOH X 44 344 76 HOH HOH . E 5 HOH X 45 345 12 HOH HOH . E 5 HOH X 46 346 48 HOH HOH . E 5 HOH X 47 347 40 HOH HOH . E 5 HOH X 48 348 80 HOH HOH . E 5 HOH X 49 349 70 HOH HOH . E 5 HOH X 50 350 28 HOH HOH . E 5 HOH X 51 351 93 HOH HOH . E 5 HOH X 52 352 7 HOH HOH . E 5 HOH X 53 353 45 HOH HOH . E 5 HOH X 54 354 44 HOH HOH . E 5 HOH X 55 355 25 HOH HOH . E 5 HOH X 56 356 72 HOH HOH . E 5 HOH X 57 357 9 HOH HOH . E 5 HOH X 58 358 100 HOH HOH . E 5 HOH X 59 359 101 HOH HOH . E 5 HOH X 60 360 32 HOH HOH . E 5 HOH X 61 361 1 HOH HOH . E 5 HOH X 62 362 19 HOH HOH . E 5 HOH X 63 363 26 HOH HOH . E 5 HOH X 64 364 87 HOH HOH . E 5 HOH X 65 365 2 HOH HOH . E 5 HOH X 66 366 74 HOH HOH . E 5 HOH X 67 367 4 HOH HOH . E 5 HOH X 68 368 83 HOH HOH . E 5 HOH X 69 369 54 HOH HOH . E 5 HOH X 70 370 6 HOH HOH . E 5 HOH X 71 371 13 HOH HOH . E 5 HOH X 72 372 71 HOH HOH . E 5 HOH X 73 373 35 HOH HOH . E 5 HOH X 74 374 81 HOH HOH . E 5 HOH X 75 375 118 HOH HOH . E 5 HOH X 76 376 27 HOH HOH . E 5 HOH X 77 377 89 HOH HOH . E 5 HOH X 78 378 86 HOH HOH . E 5 HOH X 79 379 42 HOH HOH . E 5 HOH X 80 380 66 HOH HOH . E 5 HOH X 81 381 55 HOH HOH . E 5 HOH X 82 382 49 HOH HOH . E 5 HOH X 83 383 84 HOH HOH . E 5 HOH X 84 384 108 HOH HOH . E 5 HOH X 85 385 103 HOH HOH . E 5 HOH X 86 386 98 HOH HOH . E 5 HOH X 87 387 70 HOH HOH . E 5 HOH X 88 388 17 HOH HOH . E 5 HOH X 89 389 38 HOH HOH . E 5 HOH X 90 390 99 HOH HOH . E 5 HOH X 91 391 39 HOH HOH . E 5 HOH X 92 392 64 HOH HOH . E 5 HOH X 93 393 109 HOH HOH . E 5 HOH X 94 394 122 HOH HOH . E 5 HOH X 95 395 105 HOH HOH . E 5 HOH X 96 396 79 HOH HOH . E 5 HOH X 97 397 10 HOH HOH . E 5 HOH X 98 398 50 HOH HOH . E 5 HOH X 99 399 21 HOH HOH . E 5 HOH X 100 400 75 HOH HOH . E 5 HOH X 101 401 123 HOH HOH . E 5 HOH X 102 402 30 HOH HOH . E 5 HOH X 103 403 51 HOH HOH . E 5 HOH X 104 404 43 HOH HOH . E 5 HOH X 105 405 82 HOH HOH . E 5 HOH X 106 406 69 HOH HOH . E 5 HOH X 107 407 18 HOH HOH . E 5 HOH X 108 408 112 HOH HOH . E 5 HOH X 109 409 107 HOH HOH . E 5 HOH X 110 410 111 HOH HOH . E 5 HOH X 111 411 125 HOH HOH . E 5 HOH X 112 412 58 HOH HOH . E 5 HOH X 113 413 91 HOH HOH . E 5 HOH X 114 414 73 HOH HOH . E 5 HOH X 115 415 85 HOH HOH . E 5 HOH X 116 416 88 HOH HOH . E 5 HOH X 117 417 22 HOH HOH . E 5 HOH X 118 418 102 HOH HOH . E 5 HOH X 119 419 124 HOH HOH . E 5 HOH X 120 420 47 HOH HOH . E 5 HOH X 121 421 114 HOH HOH . E 5 HOH X 122 422 34 HOH HOH . E 5 HOH X 123 423 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 U06 . . . B 2 -4.529 -28.462 4.198 0.89 13.98 ? C4 U06 201 X 1 HETATM 2 C C5 U06 . . . B 2 -4.936 -29.355 5.18 0.89 12.26 ? C5 U06 201 X 1 HETATM 3 C C6 U06 . . . B 2 -6.201 -29.191 5.721 0.89 14.69 ? C6 U06 201 X 1 HETATM 4 N N1 U06 . . . B 2 -6.974 -28.193 5.278 0.89 13.35 ? N1 U06 201 X 1 HETATM 5 N N3 U06 . . . B 2 -5.344 -27.473 3.793 0.89 11.8 ? N3 U06 201 X 1 HETATM 6 C CAA U06 . . . B 2 -7.567 -31.12 6.056 0.89 21.58 ? CAA U06 201 X 1 HETATM 7 C CAB U06 . . . B 2 -6.683 -30.051 6.704 0.89 15.57 ? CAB U06 201 X 1 HETATM 8 C C2 U06 . . . B 2 -6.564 -27.336 4.338 0.89 9.98 ? C2 U06 201 X 1 HETATM 9 N NAF U06 . . . B 2 -7.369 -26.352 3.938 0.89 9.17 ? NAF U06 201 X 1 HETATM 10 N NAI U06 . . . B 2 -3.304 -28.618 3.697 0.89 11.02 ? NAI U06 201 X 1 HETATM 11 C CAK U06 . . . B 2 -4.071 -30.453 5.655 0.89 12.69 ? CAK U06 201 X 1 HETATM 12 C CAL U06 . . . B 2 -3.406 -31.382 6.082 0.89 20.72 ? CAL U06 201 X 1 HETATM 13 C CAM U06 . . . B 2 -2.612 -32.545 6.647 0.89 22.05 ? CAM U06 201 X 1 HETATM 14 C CAN U06 . . . B 2 -3.498 -33.504 7.141 0.89 18.25 ? CAN U06 201 X 1 HETATM 15 C CAU U06 . . . B 2 -4.623 -33.862 6.406 0.89 24.41 ? CAU U06 201 X 1 HETATM 16 C CAO U06 . . . B 2 -3.267 -34.116 8.368 0.89 21.24 ? CAO U06 201 X 1 HETATM 17 O OAP U06 . . . B 2 -2.149 -33.726 9.035 0.89 27.23 ? OAP U06 201 X 1 HETATM 18 C CAQ U06 . . . B 2 -2.206 -34.211 10.385 0.89 28.29 ? CAQ U06 201 X 1 HETATM 19 C CAR U06 . . . B 2 -4.14 -35.071 8.874 0.89 18.53 ? CAR U06 201 X 1 HETATM 20 C CAS U06 . . . B 2 -5.263 -35.423 8.136 0.89 22.97 ? CAS U06 201 X 1 HETATM 21 C CAT U06 . . . B 2 -5.496 -34.827 6.906 0.89 23.38 ? CAT U06 201 X 1 HETATM 22 C CAV U06 . . . B 2 -6.625 -35.178 6.18 0.89 32.15 ? CAV U06 201 X 1 HETATM 23 C CAW U06 . . . B 2 -7.662 -35.843 6.819 0.89 43.4 ? CAW U06 201 X 1 HETATM 24 C CAX U06 . . . B 2 -8.798 -36.186 6.099 0.89 49.48 ? CAX U06 201 X 1 HETATM 25 C CAY U06 . . . B 2 -8.894 -35.866 4.751 0.89 48 ? CAY U06 201 X 1 HETATM 26 C CBB U06 . . . B 2 -10.041 -36.21 4.049 0.89 57.61 ? CBB U06 201 X 1 HETATM 27 O OBD U06 . . . B 2 -10.036 -36.211 2.797 0.89 49.29 ? OBD U06 201 X 1 HETATM 28 O OBC U06 . . . B 2 -11.085 -36.497 4.678 0.89 56.17 ? OBC U06 201 X 1 HETATM 29 C CAZ U06 . . . B 2 -7.857 -35.196 4.112 0.89 47.41 ? CAZ U06 201 X 1 HETATM 30 C CBA U06 . . . B 2 -6.72 -34.85 4.834 0.89 37.24 ? CBA U06 201 X 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 30 #